FFCP PHASE1:Hg19::chr7:83278189..83278204,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9723 | |EntrezGene=9723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10727 | |HGNC=10727 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCZ5 | |UniProt=F8WCZ5 | ||
|association_with_transcript=-63bp_to_ENST00000453333_5end | |association_with_transcript=-63bp_to_ENST00000453333_5end | ||
|cluster_id=chr7:83278189..83278204,- | |||
|coexpression_cluster_id=C1540 | |||
|description=CAGE_peak_3_at_SEMA3E_5end | |description=CAGE_peak_3_at_SEMA3E_5end | ||
|id=chr7:83278189..83278204,- | |id=chr7:83278189..83278204,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.82e-16;34!UBERON:0002020;2.82e-16;34!UBERON:0002619;5.57e-16;22!UBERON:0002791;1.55e-15;32!UBERON:0001893;1.59e-15;34!UBERON:0001869;2.59e-15;32!UBERON:0002780;2.19e-14;41!UBERON:0001890;2.19e-14;41!UBERON:0001950;5.38e-14;20!UBERON:0000073;1.75e-13;53!UBERON:0002616;1.75e-13;53!UBERON:0000956;1.77e-13;25!UBERON:0000203;1.77e-13;25!UBERON:0001017;1.76e-09;75!UBERON:0000955;4.42e-09;68!UBERON:0002298;3.93e-08;6!UBERON:0007625;4.25e-08;11!UBERON:0000125;5.74e-08;9!UBERON:0002308;5.74e-08;9!UBERON:0007023;6.06e-08;114!UBERON:0001016;6.87e-08;83!UBERON:0000200;2.75e-07;6!UBERON:0002021;5.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.93e-29,114;UBERON:0003075,1.36e-27,82;UBERON:0007284,1.36e-27,82;UBERON:0002346,1.43e-25,86;UBERON:0001049,2.78e-25,56;UBERON:0005068,2.78e-25,56;UBERON:0006241,2.78e-25,56;UBERON:0007135,2.78e-25,56;UBERON:0003056,1.22e-24,61;UBERON:0000073,4.66e-24,53;UBERON:0002616,4.66e-24,53;UBERON:0010371,4.52e-22,104;UBERON:0000955,1.11e-20,68;UBERON:0006238,1.11e-20,68;UBERON:0002780,1.25e-20,41;UBERON:0001890,1.25e-20,41;UBERON:0003080,1.25e-20,41;UBERON:0006240,1.25e-20,41;UBERON:0001017,3.33e-20,81;UBERON:0003528,6.60e-20,34;UBERON:0002020,6.60e-20,34;UBERON:0001893,2.10e-19,34;UBERON:0001869,5.39e-18,32;UBERON:0001016,5.65e-18,89;UBERON:0002791,1.03e-17,32;UBERON:0011216,4.09e-17,223;UBERON:0010314,1.06e-16,132;UBERON:0002619,4.38e-16,22;UBERON:0001950,3.81e-14,20;UBERON:0000956,1.44e-13,25;UBERON:0000203,1.44e-13,25;UBERON:0004121,1.84e-11,171;UBERON:0000924,1.84e-11,171;UBERON:0006601,1.84e-11,171;UBERON:0007625,3.45e-08,11;UBERON:0002298,3.54e-08,6;UBERON:0000125,5.50e-08,9;UBERON:0002308,5.50e-08,9;UBERON:0000200,1.51e-07,6;UBERON:0002021,5.44e-07,5;UBERON:0000483,6.64e-07,306 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0.866364470720326,1.98838425436749,0.672325146451775,0,0,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.434539556882471,0,0,1.41802225746102,4.87804674417641,2.19586964232815,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.933633106199299,0,0.490385709340376,0.302714855289863,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0.23486899728753,0,0,0.408308342509787,0.491337269247072,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0.464775771478074,1.0366105501537,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,1.88724591328378,0.658501712451753,0,0,0.185176890317059,0,0,1.44331342025273,0.695582429850461,4.10930429825376,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0.414656231081544,0,0.12624243342638,0.317489471460845,1.14596527667483,0,0,0.616964956219941,0,1.71495859578347,0,0.43596006883328,0,1.16344544182,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.71295439353627,0,0.99972991182057,0,0,0,0.239624855491583,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0.112085143993527,0,0,0,6.09827098133912,3.90419561572865,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,2.69921281782108,1.50051156317903,0,0,0,0,0,0,4.5481500811197,1.03473071292505,0,0,0.695068915744663,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,1.60405176242628,0,0.918515585316854,0,0,0,0.231046011313244,0,0,0.527758144464379,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.447749509444357,0,0,0.769350375349168,2.62411716559765,1.62689197332152,0.618246069886334,0.824125183365091,0.495056999523528,0,0,0,0,0,0,0,0.214840489736547,0,0,0.178064071293475,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0.37064843820784,0,0,1.2655176988749,0,0.255897791311334,2.56763392820352,0,0,0.359744915166629,0.823611089208164,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,2.62357900818653,0,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,1.19548792950642,1.38141957765574,0.251932747854276,0.20453736500431,0.246169610922139,0,2.87578723671446,0.716084698702437,0,3.35387579165574,0,0,2.90799823828566,2.96857914117924,1.99613798001194,0.260427761085233,0,2.89999830173917,0,4.06805840468426,4.01859059005492,12.0660180634513,2.33283690706603,0.347249989866585,0.885741385813839,1.68835014075571,3.05163472634166,0.663475559587348,0.591095237907095,0.438770794307945,0,6.13464474825854,2.23155749661011,0.683652335082007,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0.332423363800313,0,0,0,1.3282761290693,2.06617552674492,0.210998064528027,0,0,0,4.97630965539252,2.0345239835768,0.611030144933625,0.296521128680622,0.247127877893006,0,1.14581926067151,0,2.81117334870407,0,2.54364004611717,0,2.36750641709634,1.20990716048664,0.91821828489147,0.758238955541855,1.65355761355942,3.62908669890365,0,0,0.313932918407225,0,0.853828638089378,0,1.21491816834592,0,0,0.52418000472609,0,0,0,0,3.68558262655994,0,2.25980740780532,0,0,2.46912104227927,0.195551382734803,0.561111741760736,2.77488893161158,0.599428828746391,0,36.0790277922634,0,0,0.248505071130865,0,0,0.104602846312333,0,0,1.20084057741958,1.64286454670392,0,1.28929632425987,0,0.279282401272254,0.458320848023367,0,0.599037001496973,0,0,0.268733889946905,0,0,0,0,0,6.29935881694392,0,2.38568906942791,2.45166131000836,0.160753148465019,0.137539436597234,0.83088067605837,0,0,2.12623448303086,0,0.394028536495991,0.209818352539992,0.844802692155252,3.04788476865836,0,0.714695326373367,0,0,1.08599920350743,1.72844298240254,0.979762080328227,2.39460383124975,0,0,0,0.293104467356165,0,3.36135686540031,3.57028024705263,1.19760786519031,0.704815022316672,2.0289608387862,9.43225830597996,1.65695622138878,0,0,0,2.55336503108073,0,0,0.919036730290385,0.983617892129413,3.29813602125492,1.77213635993397,2.80660409274515,2.50381861413,2.29363678276028,1.44207766997908,3.10482014706917,0,0.874862855734746,0,0,0,10.7717028335583,3.333183658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| ||
|short_description=p3@SEMA3E | |short_description=p3@SEMA3E | ||
}} | }} |
Latest revision as of 19:29, 19 September 2015
Short description: | p3@SEMA3E |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEMA3E_5end |
Coexpression cluster: | C1540_gastric_pharyngeal_mucinous_smallcell_transitionalcell_rhabdomyosarcoma_somatostatinoma |
Association with transcript: | -63bp_to_ENST00000453333_5end |
EntrezGene: | SEMA3E |
HGNC: | 10727 |
UniProt: | F8WCZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data