FFCP PHASE1:Hg19::chr14:36278454..36278515,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17770 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000307138_5end | |||
|cluster_id=chr14:36278454..36278515,- | |||
|description=CAGE_peak_1_at_RALGAPA1_5end | |||
|id=chr14:36278454..36278515,- | |||
|ontology_enrichment_celltype=CL:0000738!2.55e-16!140;CL:0002031!1.12e-12!124;CL:0002087!2.40e-12!119;CL:0002057!4.44e-10!42;CL:0000766!1.03e-09!76;CL:0000860!1.87e-09!45;CL:0000037!4.86e-09!172;CL:0000566!4.86e-09!172;CL:0000557!1.07e-08!71;CL:0002032!2.82e-08!165;CL:0000837!2.82e-08!165;CL:0000839!2.27e-07!70;CL:0000988!2.34e-07!182;CL:0002009!3.43e-07!65;CL:0002194!8.52e-07!63;CL:0000576!8.52e-07!63;CL:0000040!8.52e-07!63;CL:0000559!8.52e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.22e-09;33!CL:0002057;5.22e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.79e-17,136;CL:0002031,2.48e-13,120;CL:0002087,5.23e-13,115;CL:0000766,1.71e-10,72;CL:0000860,4.44e-10,42;CL:0002057,4.44e-10,42;CL:0000557,1.91e-09,67;CL:0000037,2.00e-09,168;CL:0000473,8.07e-09,48;CL:0000234,8.07e-09,48;CL:0002032,1.21e-08,161;CL:0000837,1.21e-08,161;CL:0000839,5.07e-08,66;CL:0000988,5.07e-08,177;CL:0002009,7.20e-08,61;CL:0002194,1.86e-07,59;CL:0000576,1.86e-07,59;CL:0000040,1.86e-07,59;CL:0000559,1.86e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-09;82!CL:0002057;1.50e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-38!115;UBERON:0001049!8.04e-25!57;UBERON:0005068!8.04e-25!57;UBERON:0006241!8.04e-25!57;UBERON:0007135!8.04e-25!57;UBERON:0003080!5.10e-22!42;UBERON:0002780!1.23e-21!41;UBERON:0001890!1.23e-21!41;UBERON:0006240!1.23e-21!41;UBERON:0001017!1.54e-21!82;UBERON:0000073!1.08e-20!94;UBERON:0001016!1.08e-20!94;UBERON:0002616!1.24e-20!59;UBERON:0005743!1.52e-20!86;UBERON:0000955!5.49e-20!69;UBERON:0006238!5.49e-20!69;UBERON:0001893!1.53e-17!34;UBERON:0002020!2.44e-17!34;UBERON:0003528!2.44e-17!34;UBERON:0002791!6.10e-17!33;UBERON:0001869!2.04e-16!32;UBERON:0002346!1.85e-14!90;UBERON:0003075!1.20e-13!86;UBERON:0007284!1.20e-13!86;UBERON:0002619!1.46e-13!22;UBERON:0000956!1.34e-12!25;UBERON:0000203!1.34e-12!25;UBERON:0001950!1.39e-12!20;UBERON:0003056!2.95e-10!61;UBERON:0000924!1.22e-09!173;UBERON:0006601!1.22e-09!173;UBERON:0000153!1.73e-09!129;UBERON:0007811!1.73e-09!129;UBERON:0004121!5.44e-09!169;UBERON:0000033!9.58e-09!123;UBERON:0002390!5.45e-08!102;UBERON:0003061!5.45e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.97e-16;41!UBERON:0001890;7.97e-16;41!UBERON:0001893;4.21e-15;34!UBERON:0003528;6.27e-15;34!UBERON:0002020;6.27e-15;34!UBERON:0001869;6.44e-15;32!UBERON:0002791;7.21e-15;32!UBERON:0000073;7.21e-14;53!UBERON:0002616;7.21e-14;53!UBERON:0002619;1.39e-13;22!UBERON:0000956;1.24e-12;25!UBERON:0000203;1.24e-12;25!UBERON:0001950;1.34e-12;20!UBERON:0007023;4.47e-11;114!UBERON:0001017;4.25e-10;75!UBERON:0000955;1.69e-09;68!UBERON:0001016;2.10e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.20e-38,114;UBERON:0001049,2.01e-24,56;UBERON:0005068,2.01e-24,56;UBERON:0006241,2.01e-24,56;UBERON:0007135,2.01e-24,56;UBERON:0000073,5.91e-23,53;UBERON:0002616,5.91e-23,53;UBERON:0002780,1.23e-21,41;UBERON:0001890,1.23e-21,41;UBERON:0003080,1.23e-21,41;UBERON:0006240,1.23e-21,41;UBERON:0001016,3.28e-21,89;UBERON:0001017,3.77e-21,81;UBERON:0000955,1.34e-19,68;UBERON:0006238,1.34e-19,68;UBERON:0001893,1.53e-17,34;UBERON:0003528,2.44e-17,34;UBERON:0002020,2.44e-17,34;UBERON:0001869,2.04e-16,32;UBERON:0002791,2.38e-16,32;UBERON:0002346,4.13e-14,86;UBERON:0002619,1.46e-13,22;UBERON:0003075,2.66e-13,82;UBERON:0007284,2.66e-13,82;UBERON:0011216,1.13e-12,223;UBERON:0000956,1.34e-12,25;UBERON:0000203,1.34e-12,25;UBERON:0001950,1.39e-12,20;UBERON:0003056,2.78e-10,61;UBERON:0004121,4.91e-09,171;UBERON:0000924,4.91e-09,171;UBERON:0006601,4.91e-09,171;UBERON:0010371,1.17e-08,104;UBERON:0002390,1.65e-08,98;UBERON:0003061,1.65e-08,98;UBERON:0002193,4.43e-07,108;UBERON:0002371,8.90e-07,76 | |||
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| |||
|short_description=p1@RALGAPA1 | |||
}} |
Latest revision as of 21:35, 19 September 2015
Short description: | p1@RALGAPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RALGAPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000307138_5end |
EntrezGene: | RALGAPA1 |
HGNC: | 17770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.79e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.48e-13 | 120 |
nongranular leukocyte | 5.23e-13 | 115 |
myeloid leukocyte | 1.71e-10 | 72 |
classical monocyte | 4.44e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.44e-10 | 42 |
granulocyte monocyte progenitor cell | 1.91e-09 | 67 |
hematopoietic stem cell | 2.00e-09 | 168 |
defensive cell | 8.07e-09 | 48 |
phagocyte | 8.07e-09 | 48 |
hematopoietic oligopotent progenitor cell | 1.21e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-08 | 161 |
myeloid lineage restricted progenitor cell | 5.07e-08 | 66 |
hematopoietic cell | 5.07e-08 | 177 |
macrophage dendritic cell progenitor | 7.20e-08 | 61 |
monopoietic cell | 1.86e-07 | 59 |
monocyte | 1.86e-07 | 59 |
monoblast | 1.86e-07 | 59 |
promonocyte | 1.86e-07 | 59 |