FFCP PHASE1:Hg19::chr11:70672805..70672817,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000468619_5end | |association_with_transcript=44bp_to_ENST00000468619_5end | ||
|cluster_id=chr11:70672805..70672817,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_14_at_SHANK2_5end | |description=CAGE_peak_14_at_SHANK2_5end | ||
|id=chr11:70672805..70672817,- | |id=chr11:70672805..70672817,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.70e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;2.07e-39;20!UBERON:0002619;6.16e-36;22!UBERON:0000956;1.00e-31;25!UBERON:0000203;1.00e-31;25!UBERON:0002021;3.67e-24;5!UBERON:0002791;3.89e-23;32!UBERON:0001869;4.79e-23;32!UBERON:0001893;3.76e-20;34!UBERON:0003528;2.54e-19;34!UBERON:0002020;2.54e-19;34!UBERON:0002780;7.18e-17;41!UBERON:0001890;7.18e-17;41!UBERON:0000955;2.13e-15;68!UBERON:0002022;7.63e-15;1!UBERON:0000073;7.70e-12;53!UBERON:0002616;7.70e-12;53!UBERON:0001016;2.73e-11;83!UBERON:0001017;4.62e-11;75!UBERON:0001871;1.50e-08;6 | |||
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| ||
|short_description=p14@SHANK2 | |short_description=p14@SHANK2 | ||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p14@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SHANK2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 44bp_to_ENST00000468619_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.70e-07 | 8 |