FFCP PHASE1:Hg19::chr3:122712079..122712090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54437 | |EntrezGene=54437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10737 | |HGNC=10737 | ||
|TSSclassifier=strong | |||
|UniProt=B5ME80 | |UniProt=B5ME80 | ||
|association_with_transcript=29bp_to_ENST00000393583,uc003egb.1_5end | |association_with_transcript=29bp_to_ENST00000393583,uc003egb.1_5end | ||
|cluster_id=chr3:122712079..122712090,- | |||
|description=CAGE_peak_9_at_SEMA5B_5end | |description=CAGE_peak_9_at_SEMA5B_5end | ||
|id=chr3:122712079..122712090,- | |id=chr3:122712079..122712090,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.22e-26;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.22e-26;1!UBERON:0006241;1.35e-09;3!UBERON:0003056;1.35e-09;3!UBERON:0003057;1.35e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p9@SEMA5B | |short_description=p9@SEMA5B | ||
}} | }} |
Latest revision as of 00:35, 20 September 2015
Short description: | p9@SEMA5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEMA5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000393583, uc003egb.1_5end |
EntrezGene: | SEMA5B |
HGNC: | 10737 |
UniProt: | B5ME80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.61e-26 | 1 |
cranial nerve | 4.61e-26 | 1 |
nerve trunk | 4.61e-26 | 1 |
nerve connecting eye with brain | 4.61e-26 | 1 |
nerve | 4.61e-26 | 1 |
retinal neural layer | 4.61e-26 | 1 |
presumptive neural retina | 4.61e-26 | 1 |
insula | 5.93e-26 | 1 |
neural tissue | 9.40e-14 | 2 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
neocortex | 2.80e-11 | 20 |
regional part of cerebral cortex | 2.34e-10 | 22 |
nervous system | 7.88e-10 | 89 |
spinal cord | 1.10e-09 | 3 |
dorsal region element | 1.10e-09 | 3 |
dorsum | 1.10e-09 | 3 |
cerebral cortex | 3.07e-09 | 25 |
pallium | 3.07e-09 | 25 |
central nervous system | 1.01e-07 | 81 |
neural plate | 1.06e-07 | 82 |
presumptive neural plate | 1.06e-07 | 82 |
layer of retina | 1.59e-07 | 4 |
regional part of telencephalon | 2.07e-07 | 32 |
cerebral hemisphere | 2.07e-07 | 32 |
neural tube | 2.20e-07 | 56 |
neural rod | 2.20e-07 | 56 |
future spinal cord | 2.20e-07 | 56 |
neural keel | 2.20e-07 | 56 |
neurectoderm | 2.36e-07 | 86 |
brain grey matter | 5.08e-07 | 34 |
gray matter | 5.08e-07 | 34 |
telencephalon | 5.08e-07 | 34 |
pre-chordal neural plate | 8.39e-07 | 61 |