FFCP PHASE1:Hg19::chr5:125759230..125759241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFH3,D6R9P9 | |UniProt=D6RFH3,D6R9P9 | ||
|association_with_transcript=66bp_to_ENST00000505720,ENST00000513978,ENST00000514099_5end | |association_with_transcript=66bp_to_ENST00000505720,ENST00000513978,ENST00000514099_5end | ||
|cluster_id=chr5:125759230..125759241,+ | |||
|coexpression_cluster_id=C1274 | |coexpression_cluster_id=C1274 | ||
|description=CAGE_peak_6_at_GRAMD3_5end | |description=CAGE_peak_6_at_GRAMD3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!6.39e-09!75;CL:0002620!1.90e-07!23 | |ontology_enrichment_celltype=CL:0000057!6.39e-09!75;CL:0002620!1.90e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.91e-08;23!CL:0002537;8.45e-07;5 | |ontology_enrichment_celltype_v019=CL:0002620;1.91e-08;23!CL:0002537;8.45e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.04e-10,76;CL:0002620,2.60e-08,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;2.60e-13;53!UBERON:0002616;2.60e-13;53!UBERON:0001893;1.55e-12;34!UBERON:0002780;1.60e-12;41!UBERON:0001890;1.60e-12;41!UBERON:0005631;3.99e-12;10!UBERON:0000158;3.99e-12;10!UBERON:0003528;6.59e-12;34!UBERON:0002020;6.59e-12;34!UBERON:0002791;9.08e-12;32!UBERON:0001869;1.67e-11;32!UBERON:0000125;4.86e-11;9!UBERON:0002308;4.86e-11;9!UBERON:0003688;7.20e-11;6!UBERON:0002358;7.20e-11;6!UBERON:0003684;7.20e-11;6!UBERON:0001178;7.20e-11;6!UBERON:0009663;2.86e-09;7!UBERON:0002420;3.11e-09;9!UBERON:0007245;3.11e-09;9!UBERON:0010009;3.11e-09;9!UBERON:0010011;3.11e-09;9!UBERON:0000454;3.11e-09;9!UBERON:0000305;3.58e-09;7!UBERON:0001017;8.06e-09;75!UBERON:0002298;8.32e-09;6!UBERON:0002619;1.10e-08;22!UBERON:0000955;6.44e-08;68!UBERON:0007023;1.20e-07;114!UBERON:0001016;2.61e-07;83!UBERON:0004732;2.69e-07;13!UBERON:0000956;2.78e-07;25!UBERON:0000203;2.78e-07;25!UBERON:0001950;5.50e-07;20!UBERON:0004457;8.11e-07;9!UBERON:0000042;8.11e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000073;2.60e-13;53!UBERON:0002616;2.60e-13;53!UBERON:0001893;1.55e-12;34!UBERON:0002780;1.60e-12;41!UBERON:0001890;1.60e-12;41!UBERON:0005631;3.99e-12;10!UBERON:0000158;3.99e-12;10!UBERON:0003528;6.59e-12;34!UBERON:0002020;6.59e-12;34!UBERON:0002791;9.08e-12;32!UBERON:0001869;1.67e-11;32!UBERON:0000125;4.86e-11;9!UBERON:0002308;4.86e-11;9!UBERON:0003688;7.20e-11;6!UBERON:0002358;7.20e-11;6!UBERON:0003684;7.20e-11;6!UBERON:0001178;7.20e-11;6!UBERON:0009663;2.86e-09;7!UBERON:0002420;3.11e-09;9!UBERON:0007245;3.11e-09;9!UBERON:0010009;3.11e-09;9!UBERON:0010011;3.11e-09;9!UBERON:0000454;3.11e-09;9!UBERON:0000305;3.58e-09;7!UBERON:0001017;8.06e-09;75!UBERON:0002298;8.32e-09;6!UBERON:0002619;1.10e-08;22!UBERON:0000955;6.44e-08;68!UBERON:0007023;1.20e-07;114!UBERON:0001016;2.61e-07;83!UBERON:0004732;2.69e-07;13!UBERON:0000956;2.78e-07;25!UBERON:0000203;2.78e-07;25!UBERON:0001950;5.50e-07;20!UBERON:0004457;8.11e-07;9!UBERON:0000042;8.11e-07;9 | ||
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| ||
|short_description=p6@GRAMD3 | |short_description=p6@GRAMD3 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p6@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GRAMD3_5end |
Coexpression cluster: | C1274_Preadipocyte_Olfactory_Adipocyte_amniotic_serous_spindle_mesodermal |
Association with transcript: | 66bp_to_ENST00000505720, ENST00000513978, ENST00000514099_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | D6RFH3D6R9P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.04e-10 | 76 |
skin fibroblast | 2.60e-08 | 23 |