FFCP PHASE1:Hg19::chr11:72853171..72853188,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9873 | |EntrezGene=9873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29114 | |HGNC=29114 | ||
|TSSclassifier=strong | |||
|UniProt=O94868 | |UniProt=O94868 | ||
|association_with_transcript=-28bp_to_NM_014824,uc001oth.3,uc009ytl.2,uc010rrg.1_5end | |association_with_transcript=-28bp_to_NM_014824,uc001oth.3,uc009ytl.2,uc010rrg.1_5end | ||
|cluster_id=chr11:72853171..72853188,- | |||
|description=CAGE_peak_6_at_FCHSD2_5end | |description=CAGE_peak_6_at_FCHSD2_5end | ||
|id=chr11:72853171..72853188,- | |id=chr11:72853171..72853188,- | ||
|ontology_enrichment_celltype=CL:0000542!6.89e-14!53;CL:0000051!6.89e-14!53;CL:0000838!1.68e-13!52;CL:0000738!7.34e-10!140;CL:0000037!2.51e-09!172;CL:0000566!2.51e-09!172;CL:0000988!1.64e-08!182;CL:0000236!5.05e-08!14;CL:0002087!5.34e-08!119;CL:0000945!1.10e-07!24;CL:0000826!1.10e-07!24;CL:0002031!1.44e-07!124;CL:0002032!1.48e-07!165;CL:0000837!1.48e-07!165 | |ontology_enrichment_celltype=CL:0000542!6.89e-14!53;CL:0000051!6.89e-14!53;CL:0000838!1.68e-13!52;CL:0000738!7.34e-10!140;CL:0000037!2.51e-09!172;CL:0000566!2.51e-09!172;CL:0000988!1.64e-08!182;CL:0000236!5.05e-08!14;CL:0002087!5.34e-08!119;CL:0000945!1.10e-07!24;CL:0000826!1.10e-07!24;CL:0002031!1.44e-07!124;CL:0002032!1.48e-07!165;CL:0000837!1.48e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.28e-12;18!CL:0000789;6.28e-12;18!CL:0002419;6.28e-12;18!CL:0000542;1.06e-10;53!CL:0000084;1.96e-10;25!CL:0000236;2.49e-10;13 | |ontology_enrichment_celltype_v019=CL:0000791;6.28e-12;18!CL:0000789;6.28e-12;18!CL:0002419;6.28e-12;18!CL:0000542;1.06e-10;53!CL:0000084;1.96e-10;25!CL:0000236;2.49e-10;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.68e-17,53;CL:0000051,1.68e-17,53;CL:0000838,6.97e-17,52;CL:0000738,7.17e-15,136;CL:0000037,2.98e-13,168;CL:0002087,4.78e-12,115;CL:0000988,5.30e-12,177;CL:0000791,3.59e-11,18;CL:0000789,3.59e-11,18;CL:0002420,3.59e-11,18;CL:0002419,3.59e-11,18;CL:0000790,3.59e-11,18;CL:0000236,4.92e-11,14;CL:0002032,2.17e-10,161;CL:0000837,2.17e-10,161;CL:0002031,2.29e-10,120;CL:0000084,1.55e-09,25;CL:0000827,1.55e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;6.28e-12;18!CL:0000051;1.06e-10;53 | |ontology_enrichment_development_v019=CL:0000790;6.28e-12;18!CL:0000051;1.06e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-18!115;UBERON:0001049!9.91e-14!57;UBERON:0005068!9.91e-14!57;UBERON:0006241!9.91e-14!57;UBERON:0007135!9.91e-14!57;UBERON:0003080!4.61e-12!42;UBERON:0002780!5.08e-12!41;UBERON:0001890!5.08e-12!41;UBERON:0006240!5.08e-12!41;UBERON:0002616!8.90e-12!59;UBERON:0002020!3.65e-11!34;UBERON:0003528!3.65e-11!34;UBERON:0000955!3.93e-11!69;UBERON:0006238!3.93e-11!69;UBERON:0001893!5.54e-11!34;UBERON:0002791!9.31e-11!33;UBERON:0001017!9.93e-11!82;UBERON:0001869!1.36e-10!32;UBERON:0000073!2.33e-10!94;UBERON:0001016!2.33e-10!94;UBERON:0005743!3.89e-10!86;UBERON:0002619!1.24e-09!22;UBERON:0001950!5.85e-09!20;UBERON:0000956!7.17e-09!25;UBERON:0000203!7.17e-09!25;UBERON:0003075!5.77e-07!86;UBERON:0007284!5.77e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.19e-18!115;UBERON:0001049!9.91e-14!57;UBERON:0005068!9.91e-14!57;UBERON:0006241!9.91e-14!57;UBERON:0007135!9.91e-14!57;UBERON:0003080!4.61e-12!42;UBERON:0002780!5.08e-12!41;UBERON:0001890!5.08e-12!41;UBERON:0006240!5.08e-12!41;UBERON:0002616!8.90e-12!59;UBERON:0002020!3.65e-11!34;UBERON:0003528!3.65e-11!34;UBERON:0000955!3.93e-11!69;UBERON:0006238!3.93e-11!69;UBERON:0001893!5.54e-11!34;UBERON:0002791!9.31e-11!33;UBERON:0001017!9.93e-11!82;UBERON:0001869!1.36e-10!32;UBERON:0000073!2.33e-10!94;UBERON:0001016!2.33e-10!94;UBERON:0005743!3.89e-10!86;UBERON:0002619!1.24e-09!22;UBERON:0001950!5.85e-09!20;UBERON:0000956!7.17e-09!25;UBERON:0000203!7.17e-09!25;UBERON:0003075!5.77e-07!86;UBERON:0007284!5.77e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.03e-10;22!UBERON:0001950;3.68e-10;20!UBERON:0001869;4.97e-09;32!UBERON:0000956;1.41e-08;25!UBERON:0000203;1.41e-08;25!UBERON:0001893;1.90e-08;34!UBERON:0002780;2.20e-08;41!UBERON:0001890;2.20e-08;41!UBERON:0003528;2.42e-08;34!UBERON:0002020;2.42e-08;34!UBERON:0002791;2.91e-08;32!UBERON:0000073;5.16e-08;53!UBERON:0002616;5.16e-08;53 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.03e-10;22!UBERON:0001950;3.68e-10;20!UBERON:0001869;4.97e-09;32!UBERON:0000956;1.41e-08;25!UBERON:0000203;1.41e-08;25!UBERON:0001893;1.90e-08;34!UBERON:0002780;2.20e-08;41!UBERON:0001890;2.20e-08;41!UBERON:0003528;2.42e-08;34!UBERON:0002020;2.42e-08;34!UBERON:0002791;2.91e-08;32!UBERON:0000073;5.16e-08;53!UBERON:0002616;5.16e-08;53 | ||
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| ||
|short_description=p6@FCHSD2 | |short_description=p6@FCHSD2 | ||
}} | }} |
Latest revision as of 02:22, 20 September 2015
Short description: | p6@FCHSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FCHSD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_NM_014824, uc001oth.3, uc009ytl.2, uc010rrg.1_5end |
EntrezGene: | FCHSD2 |
HGNC: | 29114 |
UniProt: | O94868 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.68e-17 | 53 |
common lymphoid progenitor | 1.68e-17 | 53 |
lymphoid lineage restricted progenitor cell | 6.97e-17 | 52 |
leukocyte | 7.17e-15 | 136 |
hematopoietic stem cell | 2.98e-13 | 168 |
nongranular leukocyte | 4.78e-12 | 115 |
hematopoietic cell | 5.30e-12 | 177 |
mature alpha-beta T cell | 3.59e-11 | 18 |
alpha-beta T cell | 3.59e-11 | 18 |
immature T cell | 3.59e-11 | 18 |
mature T cell | 3.59e-11 | 18 |
immature alpha-beta T cell | 3.59e-11 | 18 |
B cell | 4.92e-11 | 14 |
hematopoietic oligopotent progenitor cell | 2.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.29e-10 | 120 |
T cell | 1.55e-09 | 25 |
pro-T cell | 1.55e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.58e-19 | 114 |
neural tube | 3.81e-14 | 56 |
neural rod | 3.81e-14 | 56 |
future spinal cord | 3.81e-14 | 56 |
neural keel | 3.81e-14 | 56 |
regional part of nervous system | 2.14e-13 | 53 |
regional part of brain | 2.14e-13 | 53 |
regional part of forebrain | 1.06e-10 | 41 |
forebrain | 1.06e-10 | 41 |
anterior neural tube | 1.06e-10 | 41 |
future forebrain | 1.06e-10 | 41 |
regional part of cerebral cortex | 2.90e-10 | 22 |
brain grey matter | 4.55e-10 | 34 |
gray matter | 4.55e-10 | 34 |
neocortex | 5.20e-10 | 20 |
telencephalon | 7.63e-10 | 34 |
cerebral hemisphere | 8.63e-10 | 32 |
brain | 2.37e-09 | 68 |
future brain | 2.37e-09 | 68 |
regional part of telencephalon | 6.13e-09 | 32 |
central nervous system | 1.06e-08 | 81 |
nervous system | 1.60e-08 | 89 |
cerebral cortex | 1.88e-08 | 25 |
pallium | 1.88e-08 | 25 |
neural plate | 3.62e-08 | 82 |
presumptive neural plate | 3.62e-08 | 82 |
neurectoderm | 2.59e-07 | 86 |