FFCP PHASE1:Hg19::chr1:205473784..205473857,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5129 | |EntrezGene=5129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8751 | |HGNC=8751 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9B0,D6R9X1,D6RA44 | |UniProt=D6R9B0,D6R9X1,D6RA44 | ||
|association_with_transcript=0bp_to_ENST00000443813,ENST00000462976,ENST00000478560,ENST00000507067_5end | |association_with_transcript=0bp_to_ENST00000443813,ENST00000462976,ENST00000478560,ENST00000507067_5end | ||
|cluster_id=chr1:205473784..205473857,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_CDK18_5end | |description=CAGE_peak_1_at_CDK18_5end | ||
|id=chr1:205473784..205473857,+ | |id=chr1:205473784..205473857,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.15e-11!254;CL:0000223!1.62e-07!59;CL:0002076!1.92e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.15e-11!254;CL:0000223!1.62e-07!59;CL:0002076!1.92e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.48e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.81e-14,253;CL:0000223,8.21e-09,58;CL:0002076,1.71e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.78e-11;82!UBERON:0002532;2.24e-07;206!UBERON:0010316;2.24e-07;206 | |||
|ontology_enrichment_disease=DOID:305!1.10e-08!106;DOID:0050687!2.53e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.58e-10,106;DOID:0050687,7.09e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.14e-32!115;UBERON:0005743!1.17e-20!86;UBERON:0001049!1.23e-19!57;UBERON:0005068!1.23e-19!57;UBERON:0006241!1.23e-19!57;UBERON:0007135!1.23e-19!57;UBERON:0000073!5.07e-19!94;UBERON:0001016!5.07e-19!94;UBERON:0001017!7.66e-19!82;UBERON:0000955!1.51e-18!69;UBERON:0006238!1.51e-18!69;UBERON:0002346!3.92e-18!90;UBERON:0003075!9.47e-18!86;UBERON:0007284!9.47e-18!86;UBERON:0000924!2.98e-17!173;UBERON:0006601!2.98e-17!173;UBERON:0004121!9.21e-17!169;UBERON:0002616!2.12e-16!59;UBERON:0000033!2.19e-16!123;UBERON:0002780!3.58e-16!41;UBERON:0001890!3.58e-16!41;UBERON:0006240!3.58e-16!41;UBERON:0003080!6.00e-16!42;UBERON:0000153!8.58e-16!129;UBERON:0007811!8.58e-16!129;UBERON:0000062!2.79e-15!511;UBERON:0003056!3.17e-14!61;UBERON:0002020!2.66e-13!34;UBERON:0003528!2.66e-13!34;UBERON:0001893!3.08e-13!34;UBERON:0002791!1.07e-12!33;UBERON:0001869!5.64e-12!32;UBERON:0000064!1.93e-10!219;UBERON:0002619!4.68e-10!22;UBERON:0004119!3.07e-09!169;UBERON:0000925!3.07e-09!169;UBERON:0006595!3.07e-09!169;UBERON:0001950!3.85e-09!20;UBERON:0000481!9.32e-09!347;UBERON:0000956!1.19e-08!25;UBERON:0000203!1.19e-08!25;UBERON:0000922!9.69e-08!612;UBERON:0004921!1.85e-07!129;UBERON:0004185!1.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.81e-12;41!UBERON:0001890;9.81e-12;41!UBERON:0001893;2.85e-11;34!UBERON:0003528;5.38e-11;34!UBERON:0002020;5.38e-11;34!UBERON:0002791;1.57e-10;32!UBERON:0001869;1.72e-10;32!UBERON:0000073;1.97e-10;53!UBERON:0002616;1.97e-10;53!UBERON:0002619;3.77e-10;22!UBERON:0007023;1.19e-09;114!UBERON:0001950;3.60e-09;20!UBERON:0001017;2.08e-08;75!UBERON:0000955;2.88e-08;68!UBERON:0000956;3.52e-08;25!UBERON:0000203;3.52e-08;25!UBERON:0001016;5.94e-07;83!UBERON:0000125;7.54e-07;9!UBERON:0002308;7.54e-07;9!UBERON:0004921;9.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-33,114;UBERON:0011216,1.42e-22,223;UBERON:0001049,1.44e-19,56;UBERON:0005068,1.44e-19,56;UBERON:0006241,1.44e-19,56;UBERON:0007135,1.44e-19,56;UBERON:0010371,3.93e-19,104;UBERON:0001017,5.56e-19,81;UBERON:0002346,7.15e-19,86;UBERON:0000955,1.61e-18,68;UBERON:0006238,1.61e-18,68;UBERON:0003075,1.81e-18,82;UBERON:0007284,1.81e-18,82;UBERON:0004121,2.00e-18,171;UBERON:0000924,2.00e-18,171;UBERON:0006601,2.00e-18,171;UBERON:0000073,1.31e-17,53;UBERON:0002616,1.31e-17,53;UBERON:0001016,2.87e-17,89;UBERON:0002780,5.36e-16,41;UBERON:0001890,5.36e-16,41;UBERON:0003080,5.36e-16,41;UBERON:0006240,5.36e-16,41;UBERON:0003056,4.40e-15,61;UBERON:0003528,6.09e-13,34;UBERON:0002020,6.09e-13,34;UBERON:0001893,7.09e-13,34;UBERON:0002791,1.18e-11,32;UBERON:0001869,1.48e-11,32;UBERON:0004119,2.70e-10,160;UBERON:0000925,2.70e-10,160;UBERON:0006595,2.70e-10,160;UBERON:0010314,3.00e-10,132;UBERON:0002619,4.40e-10,22;UBERON:0001950,4.17e-09,20;UBERON:0004921,1.22e-08,118;UBERON:0000922,3.44e-08,592;UBERON:0000956,4.47e-08,25;UBERON:0000203,4.47e-08,25;UBERON:0001007,1.72e-07,145;UBERON:0001555,1.72e-07,145;UBERON:0007026,1.72e-07,145;UBERON:0005423,3.84e-07,581;UBERON:0000125,7.96e-07,9;UBERON:0002308,7.96e-07,9 | |||
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| ||
|short_description=p1@CDK18 | |short_description=p1@CDK18 | ||
}} | }} |
Latest revision as of 03:06, 20 September 2015
Short description: | p1@CDK18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK18_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000443813, ENST00000462976, ENST00000478560, ENST00000507067_5end |
EntrezGene: | CDK18 |
HGNC: | 8751 |
UniProt: | D6R9B0D6R9X1D6RA44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.81e-14 | 253 |
endodermal cell | 8.21e-09 | 58 |
endo-epithelial cell | 1.71e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.58e-10 | 106 |
cell type cancer | 7.09e-08 | 143 |