FFCP PHASE1:Hg19::chr2:216259404..216259444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=Q5CZ99 | |UniProt=Q5CZ99 | ||
|association_with_transcript=0bp_to_CR936623_5end | |association_with_transcript=0bp_to_CR936623_5end | ||
|cluster_id=chr2:216259404..216259444,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_21_at_FN1_5end | |description=CAGE_peak_21_at_FN1_5end | ||
|id=chr2:216259404..216259444,- | |id=chr2:216259404..216259444,- | ||
|ontology_enrichment_celltype=CL:0000055!6.05e-33!180;CL:0000057!4.01e-22!75;CL:0000680!2.58e-13!57;CL:0000056!2.58e-13!57;CL:0000355!2.58e-13!57;CL:0002371!4.32e-13!591;CL:0000183!1.11e-12!59;CL:0000187!4.54e-12!54;CL:0000220!8.26e-12!246;CL:0002321!1.78e-11!248;CL:0000144!4.75e-11!625;CL:0000222!1.85e-10!119;CL:0000393!7.60e-10!60;CL:0000211!7.60e-10!60;CL:0002620!5.45e-09!23;CL:0000192!5.89e-08!42;CL:0000514!5.89e-08!42;CL:0002334!7.78e-08!12;CL:0002494!1.17e-07!16;CL:0000359!2.03e-07!32 | |ontology_enrichment_celltype=CL:0000055!6.05e-33!180;CL:0000057!4.01e-22!75;CL:0000680!2.58e-13!57;CL:0000056!2.58e-13!57;CL:0000355!2.58e-13!57;CL:0002371!4.32e-13!591;CL:0000183!1.11e-12!59;CL:0000187!4.54e-12!54;CL:0000220!8.26e-12!246;CL:0002321!1.78e-11!248;CL:0000144!4.75e-11!625;CL:0000222!1.85e-10!119;CL:0000393!7.60e-10!60;CL:0000211!7.60e-10!60;CL:0002620!5.45e-09!23;CL:0000192!5.89e-08!42;CL:0000514!5.89e-08!42;CL:0002334!7.78e-08!12;CL:0002494!1.17e-07!16;CL:0000359!2.03e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.30e-13;55!CL:0000723;2.03e-11;61!CL:0000048;1.30e-10;58!CL:0000057;7.65e-10;73!CL:0002620;1.52e-09;23!CL:0000349;2.59e-09;19!CL:0002320;4.64e-09;188!CL:0002334;1.17e-08;12!CL:0002494;1.58e-08;16!CL:0000034;2.07e-08;69!CL:0000187;2.55e-08;55!CL:0000359;7.41e-08;32!CL:0000499;4.54e-07;28!CL:0000192;7.52e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.53e-24,76;CL:0000048,8.72e-16,427;CL:0000680,1.41e-15,58;CL:0000056,1.41e-15,58;CL:0000355,1.41e-15,58;CL:0000723,2.57e-15,433;CL:0000187,3.79e-14,55;CL:0000034,4.57e-14,441;CL:0000393,4.95e-11,61;CL:0000211,4.95e-11,61;CL:0000222,1.04e-09,121;CL:0002620,1.42e-09,23;CL:0000192,2.03e-09,43;CL:0000514,2.03e-09,43;CL:0000349,2.84e-09,19;CL:0002321,8.87e-09,250;CL:0002334,1.07e-08,12;CL:0002494,1.70e-08,16;CL:0000359,2.34e-08,32;CL:0002320,3.67e-07,361;CL:0000499,4.33e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.84e-08;58!CL:0000514;7.52e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.15e-16!143;UBERON:0000914!2.10e-16!83;UBERON:0002329!2.10e-16!83;UBERON:0003077!2.10e-16!83;UBERON:0003059!2.10e-16!83;UBERON:0007282!2.10e-16!83;UBERON:0009618!2.10e-16!83;UBERON:0007285!2.10e-16!83;UBERON:0004290!9.08e-15!70;UBERON:0003914!2.23e-14!118;UBERON:0004872!2.32e-14!84;UBERON:0000486!7.73e-14!82;UBERON:0000490!2.07e-12!138;UBERON:0002049!2.35e-12!79;UBERON:0007798!2.35e-12!79;UBERON:0001134!5.98e-12!61;UBERON:0002036!5.98e-12!61;UBERON:0003082!5.98e-12!61;UBERON:0002385!8.94e-12!63;UBERON:0001015!8.94e-12!63;UBERON:0000383!8.94e-12!63;UBERON:0002100!9.17e-12!216;UBERON:0000468!1.07e-10!659;UBERON:0002199!1.76e-10!45;UBERON:0002416!1.76e-10!45;UBERON:0004535!1.79e-10!110;UBERON:0000475!1.85e-10!365;UBERON:0001009!4.56e-10!113;UBERON:0003102!1.29e-09!95;UBERON:0001637!1.40e-09!42;UBERON:0003509!1.40e-09!42;UBERON:0004572!1.40e-09!42;UBERON:0000055!1.46e-09!69;UBERON:0000119!1.50e-09!312;UBERON:0000483!3.41e-09!309;UBERON:0001981!3.44e-09!60;UBERON:0007500!3.44e-09!60;UBERON:0004537!3.44e-09!60;UBERON:0006965!3.44e-09!60;UBERON:0004923!7.36e-09!57;UBERON:0002097!8.93e-09!40;UBERON:0000948!7.77e-08!24;UBERON:0005498!7.77e-08!24;UBERON:0004140!7.77e-08!24;UBERON:0009881!7.77e-08!24;UBERON:0004141!7.77e-08!24;UBERON:0003084!7.77e-08!24;UBERON:0007005!7.77e-08!24;UBERON:0004139!7.77e-08!24;UBERON:0004291!7.77e-08!24;UBERON:0003104!2.49e-07!238;UBERON:0009142!2.49e-07!238;UBERON:0004573!3.07e-07!33;UBERON:0004571!3.07e-07!33;UBERON:0007100!7.60e-07!27;UBERON:0001013!7.67e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.74e-08;198!UBERON:0002097;8.03e-08;41!UBERON:0002199;9.06e-08;46!UBERON:0002416;9.06e-08;46!UBERON:0001637;1.02e-07;42!UBERON:0003509;1.02e-07;42!UBERON:0004572;1.02e-07;42!UBERON:0000478;1.08e-07;24!UBERON:0004573;3.59e-07;33!UBERON:0004571;3.59e-07;33!UBERON:0001013;6.40e-07;14 | |||
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| ||
|short_description=p21@FN1 | |short_description=p21@FN1 | ||
}} | }} |
Latest revision as of 03:18, 20 September 2015
Short description: | p21@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_CR936623_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | Q5CZ99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.53e-24 | 76 |
multi fate stem cell | 8.72e-16 | 427 |
muscle precursor cell | 1.41e-15 | 58 |
myoblast | 1.41e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-15 | 58 |
somatic stem cell | 2.57e-15 | 433 |
muscle cell | 3.79e-14 | 55 |
stem cell | 4.57e-14 | 441 |
electrically responsive cell | 4.95e-11 | 61 |
electrically active cell | 4.95e-11 | 61 |
mesodermal cell | 1.04e-09 | 121 |
skin fibroblast | 1.42e-09 | 23 |
smooth muscle cell | 2.03e-09 | 43 |
smooth muscle myoblast | 2.03e-09 | 43 |
extraembryonic cell | 2.84e-09 | 19 |
embryonic cell | 8.87e-09 | 250 |
preadipocyte | 1.07e-08 | 12 |
cardiocyte | 1.70e-08 | 16 |
vascular associated smooth muscle cell | 2.34e-08 | 32 |
connective tissue cell | 3.67e-07 | 361 |
stromal cell | 4.33e-07 | 28 |