FFCP PHASE1:Hg19::chr16:1031520..1031620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64788 | |EntrezGene=64788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14154 | |HGNC=14154 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-202bp_to_NR_033645,NR_036442,uc002ckk.2_5end | |association_with_transcript=-202bp_to_NR_033645,NR_036442,uc002ckk.2_5end | ||
|cluster_id=chr16:1031520..1031620,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LMF1_5end | |description=CAGE_peak_1_at_LMF1_5end | ||
|id=chr16:1031520..1031620,- | |id=chr16:1031520..1031620,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.50e-13;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.17e-35!115;UBERON:0005743!6.53e-32!86;UBERON:0000073!2.77e-31!94;UBERON:0001016!2.77e-31!94;UBERON:0001017!9.38e-30!82;UBERON:0001049!5.53e-29!57;UBERON:0005068!5.53e-29!57;UBERON:0006241!5.53e-29!57;UBERON:0007135!5.53e-29!57;UBERON:0002346!7.22e-27!90;UBERON:0003075!1.32e-25!86;UBERON:0007284!1.32e-25!86;UBERON:0002780!3.93e-25!41;UBERON:0001890!3.93e-25!41;UBERON:0006240!3.93e-25!41;UBERON:0003080!4.69e-25!42;UBERON:0002616!1.49e-24!59;UBERON:0000955!2.32e-24!69;UBERON:0006238!2.32e-24!69;UBERON:0002020!1.33e-21!34;UBERON:0003528!1.33e-21!34;UBERON:0001893!1.46e-21!34;UBERON:0002791!5.86e-21!33;UBERON:0001869!2.91e-20!32;UBERON:0003056!1.54e-19!61;UBERON:0002619!5.15e-16!22;UBERON:0000956!1.80e-15!25;UBERON:0000203!1.80e-15!25;UBERON:0000153!9.02e-15!129;UBERON:0007811!9.02e-15!129;UBERON:0001950!1.04e-14!20;UBERON:0000924!1.10e-14!173;UBERON:0006601!1.10e-14!173;UBERON:0000033!2.95e-14!123;UBERON:0004121!1.09e-13!169;UBERON:0000025!3.67e-08!194;UBERON:0000475!5.06e-08!365;UBERON:0002420!9.96e-08!9;UBERON:0007245!9.96e-08!9;UBERON:0010009!9.96e-08!9;UBERON:0010011!9.96e-08!9;UBERON:0000454!9.96e-08!9;UBERON:0002308!1.22e-07!9;UBERON:0000125!1.22e-07!9;UBERON:0000483!2.24e-07!309;UBERON:0000119!2.52e-07!312;UBERON:0004111!6.40e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.03e-21;34!UBERON:0002020;2.03e-21;34!UBERON:0001893;2.17e-21;34!UBERON:0002791;2.77e-21;32!UBERON:0001869;3.13e-21;32!UBERON:0002780;3.73e-21;41!UBERON:0001890;3.73e-21;41!UBERON:0002619;1.58e-18;22!UBERON:0000073;1.97e-18;53!UBERON:0002616;1.97e-18;53!UBERON:0000956;7.49e-18;25!UBERON:0000203;7.49e-18;25!UBERON:0001950;5.35e-17;20!UBERON:0001016;3.53e-13;83!UBERON:0001017;3.81e-13;75!UBERON:0000955;7.68e-13;68!UBERON:0000922;4.58e-11;49!UBERON:0007023;6.57e-11;114!UBERON:0002420;8.41e-09;9!UBERON:0007245;8.41e-09;9!UBERON:0010009;8.41e-09;9!UBERON:0010011;8.41e-09;9!UBERON:0000454;8.41e-09;9!UBERON:0000125;1.07e-08;9!UBERON:0002308;1.07e-08;9!UBERON:0009663;3.27e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.95e-38,114;UBERON:0001049,4.97e-34,56;UBERON:0005068,4.97e-34,56;UBERON:0006241,4.97e-34,56;UBERON:0007135,4.97e-34,56;UBERON:0001017,1.25e-33,81;UBERON:0001016,7.48e-33,89;UBERON:0000073,1.03e-31,53;UBERON:0002616,1.03e-31,53;UBERON:0002346,2.86e-30,86;UBERON:0003075,2.64e-29,82;UBERON:0007284,2.64e-29,82;UBERON:0002780,3.55e-29,41;UBERON:0001890,3.55e-29,41;UBERON:0003080,3.55e-29,41;UBERON:0006240,3.55e-29,41;UBERON:0000955,2.46e-27,68;UBERON:0006238,2.46e-27,68;UBERON:0003528,4.91e-25,34;UBERON:0002020,4.91e-25,34;UBERON:0001893,5.47e-25,34;UBERON:0002791,1.66e-23,32;UBERON:0001869,1.82e-23,32;UBERON:0003056,1.85e-22,61;UBERON:0010371,4.95e-20,104;UBERON:0010314,8.05e-19,132;UBERON:0002619,1.74e-18,22;UBERON:0000956,7.54e-18,25;UBERON:0000203,7.54e-18,25;UBERON:0004121,4.90e-17,171;UBERON:0000924,4.90e-17,171;UBERON:0006601,4.90e-17,171;UBERON:0001950,5.86e-17,20;UBERON:0011216,1.21e-13,223;UBERON:0002420,8.73e-09,9;UBERON:0007245,8.73e-09,9;UBERON:0010009,8.73e-09,9;UBERON:0010011,8.73e-09,9;UBERON:0000454,8.73e-09,9;UBERON:0000125,1.10e-08,9;UBERON:0002308,1.10e-08,9;UBERON:0000025,7.65e-08,192;UBERON:0009663,3.37e-07,7 | |||
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| ||
|short_description=p1@LMF1 | |short_description=p1@LMF1 | ||
}} | }} |
Latest revision as of 04:16, 20 September 2015
Short description: | p1@LMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LMF1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -202bp_to_NR_033645, NR_036442, uc002ckk.2_5end |
EntrezGene: | LMF1 |
HGNC: | 14154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data