FFCP PHASE1:Hg19::chr14:52327321..52327336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |EntrezGene=54331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |HGNC=4404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000557208_5end | |association_with_transcript=-22bp_to_ENST00000557208_5end | ||
|cluster_id=chr14:52327321..52327336,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_GNG2_5end | |description=CAGE_peak_1_at_GNG2_5end | ||
|id=chr14:52327321..52327336,+ | |id=chr14:52327321..52327336,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.15e-45!140;CL:0000037!7.73e-40!172;CL:0000566!7.73e-40!172;CL:0000988!2.67e-37!182;CL:0002032!7.99e-37!165;CL:0000837!7.99e-37!165;CL:0002031!2.08e-35!124;CL:0002087!1.31e-34!119;CL:0002057!5.07e-24!42;CL:0000766!7.47e-22!76;CL:0000860!2.20e-20!45;CL:0000763!1.52e-18!112;CL:0000049!1.52e-18!112;CL:0000557!2.05e-18!71;CL:0000542!7.97e-18!53;CL:0000051!7.97e-18!53;CL:0000838!1.87e-17!52;CL:0000048!7.98e-17!430;CL:0000839!1.09e-16!70;CL:0000134!1.11e-16!358;CL:0000034!2.83e-16!444;CL:0002009!5.47e-16!65;CL:0000219!6.24e-16!390;CL:0002320!7.63e-16!365;CL:0000723!1.17e-15!436;CL:0002194!4.20e-15!63;CL:0000576!4.20e-15!63;CL:0000040!4.20e-15!63;CL:0000559!4.20e-15!63;CL:0000084!2.79e-12!25;CL:0000827!2.79e-12!25;CL:0000791!4.97e-11!18;CL:0000789!4.97e-11!18;CL:0002420!4.97e-11!18;CL:0002419!4.97e-11!18;CL:0000790!4.97e-11!18;CL:0000625!2.06e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.15e-45!140;CL:0000037!7.73e-40!172;CL:0000566!7.73e-40!172;CL:0000988!2.67e-37!182;CL:0002032!7.99e-37!165;CL:0000837!7.99e-37!165;CL:0002031!2.08e-35!124;CL:0002087!1.31e-34!119;CL:0002057!5.07e-24!42;CL:0000766!7.47e-22!76;CL:0000860!2.20e-20!45;CL:0000763!1.52e-18!112;CL:0000049!1.52e-18!112;CL:0000557!2.05e-18!71;CL:0000542!7.97e-18!53;CL:0000051!7.97e-18!53;CL:0000838!1.87e-17!52;CL:0000048!7.98e-17!430;CL:0000839!1.09e-16!70;CL:0000134!1.11e-16!358;CL:0000034!2.83e-16!444;CL:0002009!5.47e-16!65;CL:0000219!6.24e-16!390;CL:0002320!7.63e-16!365;CL:0000723!1.17e-15!436;CL:0002194!4.20e-15!63;CL:0000576!4.20e-15!63;CL:0000040!4.20e-15!63;CL:0000559!4.20e-15!63;CL:0000084!2.79e-12!25;CL:0000827!2.79e-12!25;CL:0000791!4.97e-11!18;CL:0000789!4.97e-11!18;CL:0002420!4.97e-11!18;CL:0002419!4.97e-11!18;CL:0000790!4.97e-11!18;CL:0000625!2.06e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-18;33!CL:0002057;2.81e-18;33!CL:0000473;6.02e-14;39!CL:0000234;6.02e-14;39!CL:0000576;1.10e-13;48!CL:0002087;5.32e-13;104!CL:0000766;1.79e-12;69!CL:0000084;2.38e-12;25!CL:0000791;3.90e-11;18!CL:0000789;3.90e-11;18!CL:0002419;3.90e-11;18!CL:0000738;1.40e-10;136!CL:0000542;1.99e-10;53!CL:0000988;2.10e-08;177!CL:0000625;1.78e-07;11!CL:0000763;1.83e-07;100!CL:0000094;9.26e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.44e-49,136;CL:0000037,4.01e-43,168;CL:0000988,1.76e-40,177;CL:0002032,5.21e-40,161;CL:0000837,5.21e-40,161;CL:0002031,1.19e-38,120;CL:0002087,6.96e-38,115;CL:0000766,6.65e-25,72;CL:0000860,3.02e-24,42;CL:0002057,3.02e-24,42;CL:0000473,1.50e-22,48;CL:0000234,1.50e-22,48;CL:0000557,3.15e-21,67;CL:0000763,5.73e-21,108;CL:0000049,5.73e-21,108;CL:0000839,2.51e-19,66;CL:0002009,1.12e-18,61;CL:0000542,4.47e-18,53;CL:0000051,4.47e-18,53;CL:0000134,6.43e-18,354;CL:0002194,9.74e-18,59;CL:0000576,9.74e-18,59;CL:0000040,9.74e-18,59;CL:0000559,9.74e-18,59;CL:0000838,1.06e-17,52;CL:0000048,1.34e-17,427;CL:0000219,4.82e-17,386;CL:0002320,4.93e-17,361;CL:0000034,5.71e-17,441;CL:0000723,2.43e-16,433;CL:0000084,2.18e-12,25;CL:0000827,2.18e-12,25;CL:0000791,4.00e-11,18;CL:0000789,4.00e-11,18;CL:0002420,4.00e-11,18;CL:0002419,4.00e-11,18;CL:0000790,4.00e-11,18;CL:0000625,1.80e-07,11;CL:0000094,9.36e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.49e-18;42!CL:0000790;3.90e-11;18!CL:0000051;1.99e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.52e-22!102;UBERON:0003061!6.52e-22!102;UBERON:0002193!2.37e-20!112;UBERON:0002384!4.33e-15!375;UBERON:0002371!7.39e-15!80;UBERON:0001474!1.00e-13!86;UBERON:0004765!6.33e-11!101;UBERON:0001434!6.33e-11!101;UBERON:0002405!1.56e-10!115;UBERON:0007023!3.77e-10!115;UBERON:0002204!8.84e-08!167;UBERON:0002619!5.15e-07!22 | |ontology_enrichment_uberon=UBERON:0002390!6.52e-22!102;UBERON:0003061!6.52e-22!102;UBERON:0002193!2.37e-20!112;UBERON:0002384!4.33e-15!375;UBERON:0002371!7.39e-15!80;UBERON:0001474!1.00e-13!86;UBERON:0004765!6.33e-11!101;UBERON:0001434!6.33e-11!101;UBERON:0002405!1.56e-10!115;UBERON:0007023!3.77e-10!115;UBERON:0002204!8.84e-08!167;UBERON:0002619!5.15e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.72e-07;22!UBERON:0000178;9.03e-07;15!UBERON:0000179;9.03e-07;15!UBERON:0000463;9.03e-07;15 | |||
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| ||
|short_description=p1@GNG2 | |short_description=p1@GNG2 | ||
}} | }} |
Latest revision as of 05:38, 20 September 2015
Short description: | p1@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -22bp_to_ENST00000557208_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-24 | 98 |
blood island | 1.82e-24 | 98 |
hemolymphoid system | 2.42e-22 | 108 |
bone marrow | 3.81e-17 | 76 |
immune system | 5.32e-17 | 93 |
connective tissue | 2.99e-16 | 371 |
bone element | 7.46e-16 | 82 |
skeletal element | 1.45e-13 | 90 |
skeletal system | 8.31e-12 | 100 |
adult organism | 4.50e-10 | 114 |
musculoskeletal system | 3.59e-08 | 167 |
regional part of cerebral cortex | 4.54e-07 | 22 |
blood | 9.32e-07 | 15 |
haemolymphatic fluid | 9.32e-07 | 15 |
organism substance | 9.32e-07 | 15 |