FFCP PHASE1:Hg19::chr9:115913314..115913325,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11017 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z3D2 | |||
|association_with_transcript=4bp_to_ENST00000374220_5end | |||
|cluster_id=chr9:115913314..115913325,+ | |||
|coexpression_cluster_id=C2936 | |||
|description=CAGE_peak_3_at_SLC31A2_5end | |||
|id=chr9:115913314..115913325,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.75e-26!42;CL:0002009!1.17e-23!65;CL:0000860!2.93e-23!45;CL:0002194!1.58e-22!63;CL:0000576!1.58e-22!63;CL:0000040!1.58e-22!63;CL:0000559!1.58e-22!63;CL:0000557!6.41e-21!71;CL:0000766!2.65e-20!76;CL:0000839!4.39e-19!70;CL:0000763!1.23e-13!112;CL:0000049!1.23e-13!112;CL:0000738!3.87e-08!140;CL:0002087!2.15e-07!119;CL:0002031!7.34e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-32;33!CL:0002057;1.48e-32;33!CL:0000473;3.64e-28;39!CL:0000234;3.64e-28;39!CL:0000576;1.00e-26;48!CL:0000766;1.79e-16;69!CL:0000763;4.53e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.65e-43,48;CL:0000234,2.65e-43,48;CL:0000860,7.25e-43,42;CL:0002057,7.25e-43,42;CL:0002009,1.11e-42,61;CL:0002194,1.05e-40,59;CL:0000576,1.05e-40,59;CL:0000040,1.05e-40,59;CL:0000559,1.05e-40,59;CL:0000557,4.84e-37,67;CL:0000766,8.37e-36,72;CL:0000839,2.51e-34,66;CL:0000763,1.13e-22,108;CL:0000049,1.13e-22,108;CL:0000738,3.99e-15,136;CL:0002087,4.58e-14,115;CL:0002031,3.66e-13,120;CL:0000037,2.88e-10,168;CL:0002032,1.60e-09,161;CL:0000837,1.60e-09,161;CL:0000988,3.02e-09,177;CL:0002393,8.92e-09,9;CL:0002397,8.92e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-31;42!CL:0000049;2.85e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.19e-20!102;UBERON:0003061!4.19e-20!102;UBERON:0002371!7.09e-20!80;UBERON:0002193!6.07e-19!112;UBERON:0001474!6.24e-17!86;UBERON:0004765!4.62e-16!101;UBERON:0001434!4.62e-16!101;UBERON:0002405!5.75e-14!115;UBERON:0007023!1.21e-11!115;UBERON:0002204!1.48e-07!167;UBERON:0001049!7.09e-07!57;UBERON:0005068!7.09e-07!57;UBERON:0006241!7.09e-07!57;UBERON:0007135!7.09e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.44e-33,76;UBERON:0002390,4.56e-30,98;UBERON:0003061,4.56e-30,98;UBERON:0001474,5.71e-29,82;UBERON:0004765,8.20e-29,90;UBERON:0002193,3.61e-26,108;UBERON:0002405,4.05e-26,93;UBERON:0001434,7.99e-26,100;UBERON:0002204,2.77e-11,167;UBERON:0007023,8.29e-11,114;UBERON:0002050,6.15e-10,564;UBERON:0005423,7.34e-09,581;UBERON:0000923,8.16e-09,560;UBERON:0010316,8.16e-09,560;UBERON:0005291,8.16e-09,560;UBERON:0006598,8.16e-09,560;UBERON:0010317,8.16e-09,560;UBERON:0002532,8.16e-09,560;UBERON:0000922,2.89e-08,592;UBERON:0001049,8.61e-08,56;UBERON:0005068,8.61e-08,56;UBERON:0006241,8.61e-08,56;UBERON:0007135,8.61e-08,56;UBERON:0010371,5.07e-07,104;UBERON:0003081,9.48e-07,203 | |||
|phase1_expression=2.18014055124668,1.71280419112787,2.11431606143957,0,0,1.74467704820074,0,0,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.251085279189606,0,0,0,2.36018566109342,1.15148819429164,5.41856431606266,1.83884244895785,1.8072355126695,0.739508020333575,0.0774672005803016,0,2.64240395401362,3.87796785972314,2.60707781711184,4.99125002646459,1.79132379391939,4.21061765824673,2.83333124397605,7.4153101777578,8.69114670484262,6.54976965207104,5.81072592264212,3.70051099219643,4.02618282163635,18.4123131086176,22.5421421745609,18.9185783910868,11.721353145045,4.51839278508678,2.70852973188684,7.71793592124679,4.09359225086769,4.04502272001152,9.18251677112708,4.17207735198922,4.47535988059329,13.5239033076554,26.9275937789203,21.3112375266347,10.7377418292576,5.6738522469114,4.9825779919646,10.3011952755265,22.9452484104889,19.3298071787554,4.84319602106695,5.89244217580104,6.0127853613768,2.5350634357433,3.18906449947565,3.56419697364239,2.13424399178341,2.10247649978109,1.12507910687956,3.70516566863623,5.37075028437543,1.0959849225878,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0.790152254325231,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0.32592226663359,0,1.94826728407911,0,0,0,0,0.128091319725675,0.390178042679635,0,0.276350017785848,0,0.14828656316206,0,0,0,0.766440987203842,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.087834785693126,2.29213382120997,1.82147644146271,1.48313777113772,1.62273696827342,1.56716763569341,1.99436940778298,0,1.14398982156026,0,0,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,1.74437620857014,2.48485975847659,0,1.05927344650575,0,0,0,0,0.74000264525148,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0.597794722207204,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,1.43723628363248,0.168336113954066,0,0,0,0.30648779579902,0.901428353439581,0.340296549480063,0,0,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,5.60456474173561,5.72766853240753,3.44165514466805,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.653638332277218,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0,5.48751427043128,7.86812272803337,2.91534019993729,1.20364978706088,0,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,1.23108503043699,4.21207677250628,3.26988557035202,8.43604505880993,5.71139235876122,5.2456785979683,6.17953806649653,2.3250715081117,2.30029607499127,0,0.088048434013226,0.207328115540772,0.576479813667846,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0,0,4.35766729300147,2.59929777073348,3.64871341923571,0.502257091432126,0,0.239624855491583,0,1.42636905040718,1.59259437334337,0.410952645100767,2.50685348535854,0,0,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0.36807447515742,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,1.02943027143257,0.413536052245775,1.2942852049117,1.38745825144478,0.303127571446259,0,0,2.23297027036899,1.53461973288062,0.841980283299221,3.97231362692673,2.04682899626681,1.44768529029247,0,0.616838775210622,1.42049380250502,0.98552587216571,0,0.929683027679674,0.120859449591622,8.82228469334453,0.920809889358963,0.459257792658427,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,1.44257416306811,0.366277859273374,0.082509499920588,4.59412430396938,3.90036147621913,0,0.580024309752732,0.154048617114644,0,0.137836572484531,0.537101224341368,0.145016693914229,0.340906509664404,0.178064071293475,2.97512847649761,3.65161127993702,2.29702882490251,1.51736671283325,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,1.14378116354295,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0,1.21856744815642,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.709522128141196,1.05553817648832,0.329294892959902,0,0,1.82822014178473,2.01090682660736,0,1.7887322147588,2.15252686335615,0,1.33029046061003,2.06751060186264,1.52234282769651,1.52927441428475,1.13929437434833,2.85878130549347,2.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202056159043763,0.502055437748735,0.332660356546013,0.569822880276821,0.320182037633146,0,0,0,0.244482888365733,0,0,0.603821380773079,0 | |||
|short_description=p3@SLC31A2 | |||
}} |
Latest revision as of 06:18, 20 September 2015
Short description: | p3@SLC31A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC31A2_5end |
Coexpression cluster: | C2936_CD14_parotid_salivary_submaxillary_corpus_Mallassezderived_substantia |
Association with transcript: | 4bp_to_ENST00000374220_5end |
EntrezGene: | SLC31A2 |
HGNC: | 11017 |
UniProt: | F2Z3D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.65e-43 | 48 |
phagocyte | 2.65e-43 | 48 |
classical monocyte | 7.25e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.25e-43 | 42 |
macrophage dendritic cell progenitor | 1.11e-42 | 61 |
monopoietic cell | 1.05e-40 | 59 |
monocyte | 1.05e-40 | 59 |
monoblast | 1.05e-40 | 59 |
promonocyte | 1.05e-40 | 59 |
granulocyte monocyte progenitor cell | 4.84e-37 | 67 |
myeloid leukocyte | 8.37e-36 | 72 |
myeloid lineage restricted progenitor cell | 2.51e-34 | 66 |
myeloid cell | 1.13e-22 | 108 |
common myeloid progenitor | 1.13e-22 | 108 |
leukocyte | 3.99e-15 | 136 |
nongranular leukocyte | 4.58e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.66e-13 | 120 |
hematopoietic stem cell | 2.88e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.60e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-09 | 161 |
hematopoietic cell | 3.02e-09 | 177 |
intermediate monocyte | 8.92e-09 | 9 |
CD14-positive, CD16-positive monocyte | 8.92e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.44e-33 | 76 |
hematopoietic system | 4.56e-30 | 98 |
blood island | 4.56e-30 | 98 |
bone element | 5.71e-29 | 82 |
skeletal element | 8.20e-29 | 90 |
hemolymphoid system | 3.61e-26 | 108 |
immune system | 4.05e-26 | 93 |
skeletal system | 7.99e-26 | 100 |
musculoskeletal system | 2.77e-11 | 167 |
adult organism | 8.29e-11 | 114 |
embryonic structure | 6.15e-10 | 564 |
developing anatomical structure | 7.34e-09 | 581 |
germ layer | 8.16e-09 | 560 |
germ layer / neural crest | 8.16e-09 | 560 |
embryonic tissue | 8.16e-09 | 560 |
presumptive structure | 8.16e-09 | 560 |
germ layer / neural crest derived structure | 8.16e-09 | 560 |
epiblast (generic) | 8.16e-09 | 560 |
embryo | 2.89e-08 | 592 |
neural tube | 8.61e-08 | 56 |
neural rod | 8.61e-08 | 56 |
future spinal cord | 8.61e-08 | 56 |
neural keel | 8.61e-08 | 56 |
ecto-epithelium | 5.07e-07 | 104 |
lateral plate mesoderm | 9.48e-07 | 203 |