FFCP PHASE1:Hg19::chr9:116356398..116356445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000497435_5end | |association_with_transcript=0bp_to_ENST00000497435_5end | ||
|cluster_id=chr9:116356398..116356445,+ | |||
|description=CAGE_peak_1_at_RGS3_5end | |description=CAGE_peak_1_at_RGS3_5end | ||
|id=chr9:116356398..116356445,+ | |id=chr9:116356398..116356445,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.58e-34!180;CL:0000222!3.25e-30!119;CL:0000220!2.25e-21!246;CL:0002321!3.08e-21!248;CL:0000213!1.90e-15!57;CL:0000215!1.90e-15!57;CL:0002078!1.38e-14!44;CL:0000183!1.99e-14!59;CL:0002139!1.44e-13!24;CL:0000680!2.38e-13!57;CL:0000056!2.38e-13!57;CL:0000355!2.38e-13!57;CL:0000187!8.13e-13!54;CL:0000115!1.15e-12!35;CL:0000057!1.86e-12!75;CL:0000359!2.41e-12!32;CL:0000192!3.26e-12!42;CL:0000514!3.26e-12!42;CL:0000393!3.73e-12!60;CL:0000211!3.73e-12!60;CL:0000071!4.53e-10!18;CL:0002546!4.53e-10!18 | |ontology_enrichment_celltype=CL:0000055!1.58e-34!180;CL:0000222!3.25e-30!119;CL:0000220!2.25e-21!246;CL:0002321!3.08e-21!248;CL:0000213!1.90e-15!57;CL:0000215!1.90e-15!57;CL:0002078!1.38e-14!44;CL:0000183!1.99e-14!59;CL:0002139!1.44e-13!24;CL:0000680!2.38e-13!57;CL:0000056!2.38e-13!57;CL:0000355!2.38e-13!57;CL:0000187!8.13e-13!54;CL:0000115!1.15e-12!35;CL:0000057!1.86e-12!75;CL:0000359!2.41e-12!32;CL:0000192!3.26e-12!42;CL:0000514!3.26e-12!42;CL:0000393!3.73e-12!60;CL:0000211!3.73e-12!60;CL:0000071!4.53e-10!18;CL:0002546!4.53e-10!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.95e-14;24!CL:0000359;5.11e-12;32!CL:0000115;8.88e-12;36!CL:0002078;1.06e-10;45!CL:0000071;2.97e-10;18!CL:0000213;1.88e-09;58!CL:0000215;1.88e-09;58!CL:0000192;2.89e-09;43!CL:0000187;2.23e-07;55!CL:1000413;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.02e-31,121;CL:0002321,2.24e-21,250;CL:0000213,3.07e-16,58;CL:0000215,3.07e-16,58;CL:0002078,1.55e-15,45;CL:0002139,7.88e-14,24;CL:0000680,1.23e-13,58;CL:0000056,1.23e-13,58;CL:0000355,1.23e-13,58;CL:0000115,1.40e-13,36;CL:0000187,4.31e-13,55;CL:0000057,4.79e-13,76;CL:0000359,1.40e-12,32;CL:0000192,1.88e-12,43;CL:0000514,1.88e-12,43;CL:0000393,1.98e-12,61;CL:0000211,1.98e-12,61;CL:0000071,2.96e-10,18;CL:0002546,2.96e-10,18;CL:1000413,8.52e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.97e-10;18!CL:0000514;2.89e-09;43!CL:0000222;1.13e-08;121!CL:0000355;2.49e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.24e-29!79;UBERON:0007798!7.24e-29!79;UBERON:0000055!8.96e-28!69;UBERON:0003914!4.67e-27!118;UBERON:0004872!6.12e-26!84;UBERON:0001981!2.99e-25!60;UBERON:0007500!2.99e-25!60;UBERON:0004537!2.99e-25!60;UBERON:0006965!2.99e-25!60;UBERON:0001009!8.98e-25!113;UBERON:0004535!4.61e-24!110;UBERON:0000119!2.23e-21!312;UBERON:0000483!4.86e-21!309;UBERON:0001637!5.00e-19!42;UBERON:0003509!5.00e-19!42;UBERON:0004572!5.00e-19!42;UBERON:0000914!1.14e-18!83;UBERON:0002329!1.14e-18!83;UBERON:0003077!1.14e-18!83;UBERON:0003059!1.14e-18!83;UBERON:0007282!1.14e-18!83;UBERON:0009618!1.14e-18!83;UBERON:0007285!1.14e-18!83;UBERON:0005256!1.88e-18!143;UBERON:0004111!5.63e-17!241;UBERON:0004290!1.20e-16!70;UBERON:0000025!2.76e-16!194;UBERON:0000477!5.16e-16!286;UBERON:0000475!9.83e-16!365;UBERON:0004573!1.55e-15!33;UBERON:0004571!1.55e-15!33;UBERON:0000486!1.93e-15!82;UBERON:0000490!2.02e-14!138;UBERON:0001134!2.10e-13!61;UBERON:0002036!2.10e-13!61;UBERON:0003082!2.10e-13!61;UBERON:0002385!6.73e-13!63;UBERON:0001015!6.73e-13!63;UBERON:0000383!6.73e-13!63;UBERON:0002100!7.61e-13!216;UBERON:0000481!1.77e-11!347;UBERON:0000468!5.27e-11!659;UBERON:0006914!4.46e-10!25;UBERON:0001986!4.53e-10!18;UBERON:0004638!4.53e-10!18;UBERON:0004852!4.53e-10!18;UBERON:0000947!5.98e-10!21;UBERON:0010191!5.98e-10!21;UBERON:0003103!1.17e-09!69;UBERON:0000487!2.18e-09!22;UBERON:0000467!5.05e-09!625;UBERON:0007100!6.96e-09!27;UBERON:0000480!8.77e-09!626;UBERON:0000948!2.62e-08!24;UBERON:0005498!2.62e-08!24;UBERON:0004140!2.62e-08!24;UBERON:0009881!2.62e-08!24;UBERON:0004141!2.62e-08!24;UBERON:0003084!2.62e-08!24;UBERON:0007005!2.62e-08!24;UBERON:0004139!2.62e-08!24;UBERON:0004291!2.62e-08!24;UBERON:0003104!1.72e-07!238;UBERON:0009142!1.72e-07!238 | |ontology_enrichment_uberon=UBERON:0002049!7.24e-29!79;UBERON:0007798!7.24e-29!79;UBERON:0000055!8.96e-28!69;UBERON:0003914!4.67e-27!118;UBERON:0004872!6.12e-26!84;UBERON:0001981!2.99e-25!60;UBERON:0007500!2.99e-25!60;UBERON:0004537!2.99e-25!60;UBERON:0006965!2.99e-25!60;UBERON:0001009!8.98e-25!113;UBERON:0004535!4.61e-24!110;UBERON:0000119!2.23e-21!312;UBERON:0000483!4.86e-21!309;UBERON:0001637!5.00e-19!42;UBERON:0003509!5.00e-19!42;UBERON:0004572!5.00e-19!42;UBERON:0000914!1.14e-18!83;UBERON:0002329!1.14e-18!83;UBERON:0003077!1.14e-18!83;UBERON:0003059!1.14e-18!83;UBERON:0007282!1.14e-18!83;UBERON:0009618!1.14e-18!83;UBERON:0007285!1.14e-18!83;UBERON:0005256!1.88e-18!143;UBERON:0004111!5.63e-17!241;UBERON:0004290!1.20e-16!70;UBERON:0000025!2.76e-16!194;UBERON:0000477!5.16e-16!286;UBERON:0000475!9.83e-16!365;UBERON:0004573!1.55e-15!33;UBERON:0004571!1.55e-15!33;UBERON:0000486!1.93e-15!82;UBERON:0000490!2.02e-14!138;UBERON:0001134!2.10e-13!61;UBERON:0002036!2.10e-13!61;UBERON:0003082!2.10e-13!61;UBERON:0002385!6.73e-13!63;UBERON:0001015!6.73e-13!63;UBERON:0000383!6.73e-13!63;UBERON:0002100!7.61e-13!216;UBERON:0000481!1.77e-11!347;UBERON:0000468!5.27e-11!659;UBERON:0006914!4.46e-10!25;UBERON:0001986!4.53e-10!18;UBERON:0004638!4.53e-10!18;UBERON:0004852!4.53e-10!18;UBERON:0000947!5.98e-10!21;UBERON:0010191!5.98e-10!21;UBERON:0003103!1.17e-09!69;UBERON:0000487!2.18e-09!22;UBERON:0000467!5.05e-09!625;UBERON:0007100!6.96e-09!27;UBERON:0000480!8.77e-09!626;UBERON:0000948!2.62e-08!24;UBERON:0005498!2.62e-08!24;UBERON:0004140!2.62e-08!24;UBERON:0009881!2.62e-08!24;UBERON:0004141!2.62e-08!24;UBERON:0003084!2.62e-08!24;UBERON:0007005!2.62e-08!24;UBERON:0004139!2.62e-08!24;UBERON:0004291!2.62e-08!24;UBERON:0003104!1.72e-07!238;UBERON:0009142!1.72e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.48e-14;42!UBERON:0003509;1.48e-14;42!UBERON:0004572;1.48e-14;42!UBERON:0004573;1.61e-14;33!UBERON:0004571;1.61e-14;33!UBERON:0007500;2.62e-13;56!UBERON:0001981;2.62e-13;56!UBERON:0004537;2.62e-13;56!UBERON:0000055;6.06e-13;65!UBERON:0003914;9.59e-12;74!UBERON:0002049;2.15e-11;75!UBERON:0007798;2.15e-11;75!UBERON:0004638;2.97e-10;18!UBERON:0001986;2.97e-10;18!UBERON:0004852;2.97e-10;18!UBERON:0000947;3.76e-10;21!UBERON:0010191;3.76e-10;21!UBERON:0006914;5.75e-10;25!UBERON:0000487;3.00e-09;22!UBERON:0007100;1.91e-08;25!UBERON:0000948;7.35e-08;22!UBERON:0001009;1.87e-07;112!UBERON:0004535;3.86e-07;109!UBERON:0003915;8.58e-07;9!UBERON:0004700;8.58e-07;9!UBERON:0001917;8.58e-07;9 | |||
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| ||
|short_description=p1@RGS3 | |short_description=p1@RGS3 | ||
}} | }} |
Latest revision as of 07:26, 20 September 2015
Short description: | p1@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000497435_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.02e-31 | 121 |
embryonic cell | 2.24e-21 | 250 |
lining cell | 3.07e-16 | 58 |
barrier cell | 3.07e-16 | 58 |
meso-epithelial cell | 1.55e-15 | 45 |
endothelial cell of vascular tree | 7.88e-14 | 24 |
muscle precursor cell | 1.23e-13 | 58 |
myoblast | 1.23e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-13 | 58 |
endothelial cell | 1.40e-13 | 36 |
muscle cell | 4.31e-13 | 55 |
fibroblast | 4.79e-13 | 76 |
vascular associated smooth muscle cell | 1.40e-12 | 32 |
smooth muscle cell | 1.88e-12 | 43 |
smooth muscle myoblast | 1.88e-12 | 43 |
electrically responsive cell | 1.98e-12 | 61 |
electrically active cell | 1.98e-12 | 61 |
blood vessel endothelial cell | 2.96e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.96e-10 | 18 |
endothelial cell of artery | 8.52e-07 | 9 |