FFCP PHASE1:Hg19::chr17:40273348..40273397,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2648 | |EntrezGene=2648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4201 | |HGNC=4201 | ||
|TSSclassifier=strong | |||
|UniProt=Q92830 | |UniProt=Q92830 | ||
|association_with_transcript=0bp_to_ENST00000225916,NM_021078,uc002hyx.2_5end | |association_with_transcript=0bp_to_ENST00000225916,NM_021078,uc002hyx.2_5end | ||
|cluster_id=chr17:40273348..40273397,- | |||
|description=CAGE_peak_1_at_KAT2A_5end | |description=CAGE_peak_1_at_KAT2A_5end | ||
|id=chr17:40273348..40273397,- | |id=chr17:40273348..40273397,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:1240;2.12e-07;39!DOID:8692;2.65e-07;31 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001893;5.16e-10;34!UBERON:0003528;6.33e-10;34!UBERON:0002020;6.33e-10;34!UBERON:0002780;6.93e-10;41!UBERON:0001890;6.93e-10;41!UBERON:0002791;7.07e-10;32!UBERON:0001869;1.46e-09;32!UBERON:0002619;1.71e-09;22!UBERON:0001950;7.71e-09;20!UBERON:0000073;1.38e-08;53!UBERON:0002616;1.38e-08;53!UBERON:0000956;5.76e-08;25!UBERON:0000203;5.76e-08;25 | |ontology_enrichment_development_v019=UBERON:0006601;2.55e-07;82 | ||
|ontology_enrichment_disease=DOID:162!6.52e-29!235;DOID:14566!2.56e-27!239;DOID:0050687!2.06e-17!143;DOID:0050686!1.50e-13!137;DOID:305!1.12e-12!106;DOID:2531!1.01e-09!51;DOID:0060083!1.01e-09!51;DOID:1240!3.39e-09!39;DOID:8692!1.65e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.12e-07;39!DOID:8692;2.65e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.50e-29,235;DOID:14566,2.55e-27,239;DOID:0050687,2.05e-17,143;DOID:0050686,1.50e-13,137;DOID:305,1.12e-12,106;DOID:2531,1.01e-09,51;DOID:0060083,1.01e-09,51;DOID:1240,3.39e-09,39;DOID:8692,1.65e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-15!57;UBERON:0005068!1.20e-15!57;UBERON:0006241!1.20e-15!57;UBERON:0007135!1.20e-15!57;UBERON:0002346!1.38e-15!90;UBERON:0003075!1.02e-13!86;UBERON:0007284!1.02e-13!86;UBERON:0003080!1.93e-13!42;UBERON:0000073!6.02e-13!94;UBERON:0001016!6.02e-13!94;UBERON:0000955!6.33e-13!69;UBERON:0006238!6.33e-13!69;UBERON:0002780!6.67e-13!41;UBERON:0001890!6.67e-13!41;UBERON:0006240!6.67e-13!41;UBERON:0002020!1.12e-11!34;UBERON:0003528!1.12e-11!34;UBERON:0001017!1.24e-11!82;UBERON:0005743!1.41e-11!86;UBERON:0001893!1.60e-11!34;UBERON:0002616!2.79e-11!59;UBERON:0002791!3.21e-11!33;UBERON:0003056!9.07e-11!61;UBERON:0001869!1.44e-10!32;UBERON:0007023!2.55e-10!115;UBERON:0002619!2.03e-09!22;UBERON:0000064!2.26e-09!219;UBERON:0000924!6.87e-09!173;UBERON:0006601!6.87e-09!173;UBERON:0001950!9.27e-09!20;UBERON:0000956!6.85e-08!25;UBERON:0000203!6.85e-08!25;UBERON:0000153!9.01e-08!129;UBERON:0007811!9.01e-08!129;UBERON:0001041!1.02e-07!98;UBERON:0004121!1.06e-07!169;UBERON:0005177!1.26e-07!107;UBERON:0000033!1.45e-07!123;UBERON:0004921!6.04e-07!129;UBERON:0004185!6.04e-07!129;UBERON:0000077!6.68e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.16e-10;34!UBERON:0003528;6.33e-10;34!UBERON:0002020;6.33e-10;34!UBERON:0002780;6.93e-10;41!UBERON:0001890;6.93e-10;41!UBERON:0002791;7.07e-10;32!UBERON:0001869;1.46e-09;32!UBERON:0002619;1.71e-09;22!UBERON:0001950;7.71e-09;20!UBERON:0000073;1.38e-08;53!UBERON:0002616;1.38e-08;53!UBERON:0000956;5.76e-08;25!UBERON:0000203;5.76e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.05e-15,56;UBERON:0005068,4.05e-15,56;UBERON:0006241,4.05e-15,56;UBERON:0007135,4.05e-15,56;UBERON:0002346,1.61e-14,86;UBERON:0011216,3.30e-14,223;UBERON:0000073,4.03e-14,53;UBERON:0002616,4.03e-14,53;UBERON:0002780,6.67e-13,41;UBERON:0001890,6.67e-13,41;UBERON:0003080,6.67e-13,41;UBERON:0006240,6.67e-13,41;UBERON:0003075,1.11e-12,82;UBERON:0007284,1.11e-12,82;UBERON:0001016,1.46e-12,89;UBERON:0000955,1.87e-12,68;UBERON:0006238,1.87e-12,68;UBERON:0003528,1.12e-11,34;UBERON:0002020,1.12e-11,34;UBERON:0001893,1.60e-11,34;UBERON:0001017,3.35e-11,81;UBERON:0002791,7.46e-11,32;UBERON:0001869,1.44e-10,32;UBERON:0003056,3.49e-10,61;UBERON:0007023,6.42e-10,114;UBERON:0002619,2.03e-09,22;UBERON:0001950,9.27e-09,20;UBERON:0010371,2.25e-08,104;UBERON:0005177,4.58e-08,101;UBERON:0000956,6.85e-08,25;UBERON:0000203,6.85e-08,25;UBERON:0004121,8.21e-08,171;UBERON:0000924,8.21e-08,171;UBERON:0006601,8.21e-08,171;UBERON:0001041,2.75e-07,87 | |||
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| ||
|short_description=p1@KAT2A | |short_description=p1@KAT2A | ||
}} | }} |
Latest revision as of 13:37, 24 September 2015
Short description: | p1@KAT2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KAT2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000225916, NM_021078, uc002hyx.2_5end |
EntrezGene: | KAT2A |
HGNC: | 4201 |
UniProt: | Q92830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.05e-15 | 56 |
neural rod | 4.05e-15 | 56 |
future spinal cord | 4.05e-15 | 56 |
neural keel | 4.05e-15 | 56 |
neurectoderm | 1.61e-14 | 86 |
organ system subdivision | 3.30e-14 | 223 |
regional part of nervous system | 4.03e-14 | 53 |
regional part of brain | 4.03e-14 | 53 |
regional part of forebrain | 6.67e-13 | 41 |
forebrain | 6.67e-13 | 41 |
anterior neural tube | 6.67e-13 | 41 |
future forebrain | 6.67e-13 | 41 |
neural plate | 1.11e-12 | 82 |
presumptive neural plate | 1.11e-12 | 82 |
nervous system | 1.46e-12 | 89 |
brain | 1.87e-12 | 68 |
future brain | 1.87e-12 | 68 |
brain grey matter | 1.12e-11 | 34 |
gray matter | 1.12e-11 | 34 |
telencephalon | 1.60e-11 | 34 |
central nervous system | 3.35e-11 | 81 |
regional part of telencephalon | 7.46e-11 | 32 |
cerebral hemisphere | 1.44e-10 | 32 |
pre-chordal neural plate | 3.49e-10 | 61 |
adult organism | 6.42e-10 | 114 |
regional part of cerebral cortex | 2.03e-09 | 22 |
neocortex | 9.27e-09 | 20 |
ecto-epithelium | 2.25e-08 | 104 |
trunk region element | 4.58e-08 | 101 |
cerebral cortex | 6.85e-08 | 25 |
pallium | 6.85e-08 | 25 |
ectoderm-derived structure | 8.21e-08 | 171 |
ectoderm | 8.21e-08 | 171 |
presumptive ectoderm | 8.21e-08 | 171 |
foregut | 2.75e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.50e-29 | 235 |
disease of cellular proliferation | 2.55e-27 | 239 |
cell type cancer | 2.05e-17 | 143 |
organ system cancer | 1.50e-13 | 137 |
carcinoma | 1.12e-12 | 106 |
hematologic cancer | 1.01e-09 | 51 |
immune system cancer | 1.01e-09 | 51 |
leukemia | 3.39e-09 | 39 |
myeloid leukemia | 1.65e-07 | 31 |