FFCP PHASE1:Hg19::chr9:117267717..117267738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16361 | |||
|TSSclassifier=strong | |||
|UniProt=B9EGE6,Q9P202 | |||
|association_with_transcript=0bp_to_ENST00000374057,NM_001173425,NM_015404,uc004biz.3,uc004bja.3,uc004bjb.2_5end | |||
|cluster_id=chr9:117267717..117267738,- | |||
|description=CAGE_peak_2_at_DFNB31_5end | |||
|id=chr9:117267717..117267738,- | |||
|ontology_enrichment_celltype=CL:0002057!6.35e-16!42;CL:0000860!1.01e-15!45;CL:0000738!5.30e-12!140;CL:0000766!5.56e-12!76;CL:0000557!1.26e-10!71;CL:0002009!2.35e-10!65;CL:0002087!7.75e-10!119;CL:0002194!8.70e-10!63;CL:0000576!8.70e-10!63;CL:0000040!8.70e-10!63;CL:0000559!8.70e-10!63;CL:0002031!1.42e-08!124;CL:0000839!1.45e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.14e-18;33!CL:0002057;3.14e-18;33!CL:0000473;5.69e-13;39!CL:0000234;5.69e-13;39!CL:0000576;6.52e-09;48!CL:0000766;8.98e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-16,42;CL:0002057,1.19e-16,42;CL:0000473,2.27e-14,48;CL:0000234,2.27e-14,48;CL:0000738,1.16e-13,136;CL:0000766,5.85e-13,72;CL:0002087,3.61e-12,115;CL:0000557,1.04e-11,67;CL:0002031,3.50e-11,120;CL:0002009,5.39e-11,61;CL:0002194,2.44e-10,59;CL:0000576,2.44e-10,59;CL:0000040,2.44e-10,59;CL:0000559,2.44e-10,59;CL:0000839,1.16e-09,66;CL:0000988,1.35e-07,177;CL:0000037,1.52e-07,168;CL:0002032,4.57e-07,161;CL:0000837,4.57e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;9.26e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-21!57;UBERON:0005068!1.89e-21!57;UBERON:0006241!1.89e-21!57;UBERON:0007135!1.89e-21!57;UBERON:0005743!2.20e-18!86;UBERON:0002780!1.03e-17!41;UBERON:0001890!1.03e-17!41;UBERON:0006240!1.03e-17!41;UBERON:0003080!1.28e-17!42;UBERON:0001017!1.47e-17!82;UBERON:0007023!1.57e-16!115;UBERON:0002616!3.53e-16!59;UBERON:0000073!4.75e-16!94;UBERON:0001016!4.75e-16!94;UBERON:0000955!4.79e-15!69;UBERON:0006238!4.79e-15!69;UBERON:0002346!3.27e-14!90;UBERON:0002020!6.20e-14!34;UBERON:0003528!6.20e-14!34;UBERON:0001893!7.64e-14!34;UBERON:0002791!1.78e-13!33;UBERON:0003075!4.46e-13!86;UBERON:0007284!4.46e-13!86;UBERON:0001869!1.33e-12!32;UBERON:0003056!6.48e-11!61;UBERON:0000956!9.98e-10!25;UBERON:0000203!9.98e-10!25;UBERON:0002619!2.56e-09!22;UBERON:0002390!1.02e-08!102;UBERON:0003061!1.02e-08!102;UBERON:0001950!1.60e-08!20;UBERON:0002371!1.70e-08!80;UBERON:0001474!4.08e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.65e-14;41!UBERON:0001890;1.65e-14;41!UBERON:0001893;1.41e-13;34!UBERON:0000073;2.10e-13;53!UBERON:0002616;2.10e-13;53!UBERON:0003528;3.77e-13;34!UBERON:0002020;3.77e-13;34!UBERON:0002791;6.66e-13;32!UBERON:0001869;1.10e-12;32!UBERON:0000956;1.47e-10;25!UBERON:0000203;1.47e-10;25!UBERON:0002619;4.00e-10;22!UBERON:0001950;3.16e-09;20!UBERON:0000955;8.33e-08;68!UBERON:0001017;8.82e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.71e-24,56;UBERON:0005068,4.71e-24,56;UBERON:0006241,4.71e-24,56;UBERON:0007135,4.71e-24,56;UBERON:0000073,7.52e-23,53;UBERON:0002616,7.52e-23,53;UBERON:0002780,4.43e-20,41;UBERON:0001890,4.43e-20,41;UBERON:0003080,4.43e-20,41;UBERON:0006240,4.43e-20,41;UBERON:0001017,3.64e-19,81;UBERON:0007023,2.69e-18,114;UBERON:0001016,4.08e-17,89;UBERON:0000955,3.01e-16,68;UBERON:0006238,3.01e-16,68;UBERON:0002346,3.29e-16,86;UBERON:0003528,1.10e-15,34;UBERON:0002020,1.10e-15,34;UBERON:0001893,1.41e-15,34;UBERON:0003075,7.06e-15,82;UBERON:0007284,7.06e-15,82;UBERON:0002791,2.05e-14,32;UBERON:0001869,3.87e-14,32;UBERON:0003056,3.52e-12,61;UBERON:0000956,8.57e-11,25;UBERON:0000203,8.57e-11,25;UBERON:0002390,2.15e-10,98;UBERON:0003061,2.15e-10,98;UBERON:0002619,2.63e-10,22;UBERON:0001950,2.22e-09,20;UBERON:0002371,3.75e-09,76;UBERON:0011216,1.51e-08,223;UBERON:0010371,1.64e-08,104;UBERON:0001474,3.23e-08,82;UBERON:0002405,7.45e-08,93;UBERON:0002193,8.87e-08,108 | |||
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| |||
|short_description=p2@DFNB31 | |||
}} |
Latest revision as of 15:38, 24 September 2015
Short description: | p2@DFNB31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DFNB31_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374057, NM_001173425, NM_015404, uc004biz.3, uc004bja.3, uc004bjb.2_5end |
EntrezGene: | DFNB31 |
HGNC: | 16361 |
UniProt: | B9EGE6Q9P202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-16 | 42 |
defensive cell | 2.27e-14 | 48 |
phagocyte | 2.27e-14 | 48 |
leukocyte | 1.16e-13 | 136 |
myeloid leukocyte | 5.85e-13 | 72 |
nongranular leukocyte | 3.61e-12 | 115 |
granulocyte monocyte progenitor cell | 1.04e-11 | 67 |
hematopoietic lineage restricted progenitor cell | 3.50e-11 | 120 |
macrophage dendritic cell progenitor | 5.39e-11 | 61 |
monopoietic cell | 2.44e-10 | 59 |
monocyte | 2.44e-10 | 59 |
monoblast | 2.44e-10 | 59 |
promonocyte | 2.44e-10 | 59 |
myeloid lineage restricted progenitor cell | 1.16e-09 | 66 |
hematopoietic cell | 1.35e-07 | 177 |
hematopoietic stem cell | 1.52e-07 | 168 |
hematopoietic oligopotent progenitor cell | 4.57e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.57e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.71e-24 | 56 |
neural rod | 4.71e-24 | 56 |
future spinal cord | 4.71e-24 | 56 |
neural keel | 4.71e-24 | 56 |
regional part of nervous system | 7.52e-23 | 53 |
regional part of brain | 7.52e-23 | 53 |
regional part of forebrain | 4.43e-20 | 41 |
forebrain | 4.43e-20 | 41 |
anterior neural tube | 4.43e-20 | 41 |
future forebrain | 4.43e-20 | 41 |
central nervous system | 3.64e-19 | 81 |
adult organism | 2.69e-18 | 114 |
nervous system | 4.08e-17 | 89 |
brain | 3.01e-16 | 68 |
future brain | 3.01e-16 | 68 |
neurectoderm | 3.29e-16 | 86 |
brain grey matter | 1.10e-15 | 34 |
gray matter | 1.10e-15 | 34 |
telencephalon | 1.41e-15 | 34 |
neural plate | 7.06e-15 | 82 |
presumptive neural plate | 7.06e-15 | 82 |
regional part of telencephalon | 2.05e-14 | 32 |
cerebral hemisphere | 3.87e-14 | 32 |
pre-chordal neural plate | 3.52e-12 | 61 |
cerebral cortex | 8.57e-11 | 25 |
pallium | 8.57e-11 | 25 |
hematopoietic system | 2.15e-10 | 98 |
blood island | 2.15e-10 | 98 |
regional part of cerebral cortex | 2.63e-10 | 22 |
neocortex | 2.22e-09 | 20 |
bone marrow | 3.75e-09 | 76 |
organ system subdivision | 1.51e-08 | 223 |
ecto-epithelium | 1.64e-08 | 104 |
bone element | 3.23e-08 | 82 |
immune system | 7.45e-08 | 93 |
hemolymphoid system | 8.87e-08 | 108 |