FFCP PHASE1:Hg19::chr12:71058417..71058442,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5801 | |EntrezGene=5801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9680 | |HGNC=9680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001swf.1,uc001swg.1_5end | |association_with_transcript=0bp_to_uc001swf.1,uc001swg.1_5end | ||
|cluster_id=chr12:71058417..71058442,- | |||
|description=CAGE_peak_5_at_PTPRR_5end | |description=CAGE_peak_5_at_PTPRR_5end | ||
|id=chr12:71058417..71058442,- | |id=chr12:71058417..71058442,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.10e-09;6!CL:0000404;3.10e-09;6!CL:0000064;3.12e-08;3!CL:0000067;3.12e-08;3!CL:0005012;3.12e-08;3!CL:0002304;3.12e-08;3!CL:0002319;5.10e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.54e-12,8;CL:0000540,3.42e-09,6;CL:0000031,3.42e-09,6;CL:0000404,3.42e-09,6;CL:0000064,2.08e-08,3;CL:0000067,2.08e-08,3;CL:0005012,2.08e-08,3;CL:0002304,2.08e-08,3;CL:0002319,4.96e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.10e-09;6!UBERON:0006238;3.98e-08;10!UBERON:0010227;3.78e-07;1!UBERON:0004140;8.72e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;8.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.14e-36!34;UBERON:0002791!9.76e-35!33;UBERON:0002619!1.64e-34!22;UBERON:0001869!4.96e-34!32;UBERON:0001950!2.80e-31!20;UBERON:0002020!3.87e-31!34;UBERON:0003528!3.87e-31!34;UBERON:0002780!6.17e-31!41;UBERON:0001890!6.17e-31!41;UBERON:0006240!6.17e-31!41;UBERON:0007023!3.89e-30!115;UBERON:0003080!5.46e-30!42;UBERON:0000956!1.10e-29!25;UBERON:0000203!1.10e-29!25;UBERON:0001017!1.28e-29!82;UBERON:0005743!3.00e-29!86;UBERON:0003056!8.09e-28!61;UBERON:0003075!7.46e-27!86;UBERON:0007284!7.46e-27!86;UBERON:0000955!6.03e-26!69;UBERON:0006238!6.03e-26!69;UBERON:0000073!3.09e-25!94;UBERON:0001016!3.09e-25!94;UBERON:0002346!4.40e-25!90;UBERON:0001049!3.89e-24!57;UBERON:0005068!3.89e-24!57;UBERON:0006241!3.89e-24!57;UBERON:0007135!3.89e-24!57;UBERON:0002616!5.45e-23!59;UBERON:0000033!2.15e-19!123;UBERON:0000153!7.18e-19!129;UBERON:0007811!7.18e-19!129;UBERON:0004121!2.93e-16!169;UBERON:0000924!1.52e-15!173;UBERON:0006601!1.52e-15!173;UBERON:0000025!1.83e-15!194;UBERON:0000477!4.20e-14!286;UBERON:0004111!2.85e-13!241;UBERON:0000200!3.19e-11!6;UBERON:0001871!1.70e-10!7;UBERON:0000483!6.73e-10!309;UBERON:0001872!1.01e-09!5;UBERON:0000119!1.22e-09!312;UBERON:0002021!3.37e-09!5;UBERON:0000349!4.08e-09!5;UBERON:0000064!1.42e-08!219;UBERON:0002420!3.35e-08!9;UBERON:0007245!3.35e-08!9;UBERON:0010009!3.35e-08!9;UBERON:0010011!3.35e-08!9;UBERON:0000454!3.35e-08!9;UBERON:0001009!1.01e-07!113;UBERON:0004535!8.11e-07!110 | |ontology_enrichment_uberon=UBERON:0001893!2.14e-36!34;UBERON:0002791!9.76e-35!33;UBERON:0002619!1.64e-34!22;UBERON:0001869!4.96e-34!32;UBERON:0001950!2.80e-31!20;UBERON:0002020!3.87e-31!34;UBERON:0003528!3.87e-31!34;UBERON:0002780!6.17e-31!41;UBERON:0001890!6.17e-31!41;UBERON:0006240!6.17e-31!41;UBERON:0007023!3.89e-30!115;UBERON:0003080!5.46e-30!42;UBERON:0000956!1.10e-29!25;UBERON:0000203!1.10e-29!25;UBERON:0001017!1.28e-29!82;UBERON:0005743!3.00e-29!86;UBERON:0003056!8.09e-28!61;UBERON:0003075!7.46e-27!86;UBERON:0007284!7.46e-27!86;UBERON:0000955!6.03e-26!69;UBERON:0006238!6.03e-26!69;UBERON:0000073!3.09e-25!94;UBERON:0001016!3.09e-25!94;UBERON:0002346!4.40e-25!90;UBERON:0001049!3.89e-24!57;UBERON:0005068!3.89e-24!57;UBERON:0006241!3.89e-24!57;UBERON:0007135!3.89e-24!57;UBERON:0002616!5.45e-23!59;UBERON:0000033!2.15e-19!123;UBERON:0000153!7.18e-19!129;UBERON:0007811!7.18e-19!129;UBERON:0004121!2.93e-16!169;UBERON:0000924!1.52e-15!173;UBERON:0006601!1.52e-15!173;UBERON:0000025!1.83e-15!194;UBERON:0000477!4.20e-14!286;UBERON:0004111!2.85e-13!241;UBERON:0000200!3.19e-11!6;UBERON:0001871!1.70e-10!7;UBERON:0000483!6.73e-10!309;UBERON:0001872!1.01e-09!5;UBERON:0000119!1.22e-09!312;UBERON:0002021!3.37e-09!5;UBERON:0000349!4.08e-09!5;UBERON:0000064!1.42e-08!219;UBERON:0002420!3.35e-08!9;UBERON:0007245!3.35e-08!9;UBERON:0010009!3.35e-08!9;UBERON:0010011!3.35e-08!9;UBERON:0000454!3.35e-08!9;UBERON:0001009!1.01e-07!113;UBERON:0004535!8.11e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.06e-32;22!UBERON:0001950;2.71e-30;20!UBERON:0000956;1.18e-28;25!UBERON:0000203;1.18e-28;25!UBERON:0001869;8.23e-24;32!UBERON:0001893;2.43e-21;34!UBERON:0002791;6.48e-20;32!UBERON:0003528;6.54e-20;34!UBERON:0002020;6.54e-20;34!UBERON:0001872;4.35e-18;5!UBERON:0002780;9.73e-16;41!UBERON:0001890;9.73e-16;41!UBERON:0000922;1.24e-09;49!UBERON:0000955;4.02e-09;68!UBERON:0001016;6.14e-09;83!UBERON:0000073;6.66e-09;53!UBERON:0002616;6.66e-09;53!UBERON:0000200;9.30e-09;6!UBERON:0001017;1.10e-08;75!UBERON:0001870;1.82e-08;3!UBERON:0001778;3.12e-08;3!UBERON:0001775;3.12e-08;3!UBERON:0002079;3.78e-07;1!UBERON:0002581;8.72e-07;1!UBERON:0002022;8.72e-07;1!UBERON:0003112;8.72e-07;1!UBERON:0011158;8.72e-07;1!UBERON:0007190;8.72e-07;1!UBERON:0003128;8.72e-07;1!UBERON:0001703;8.72e-07;1!UBERON:0002241;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.02e-32,22;UBERON:0001950,3.07e-30,20;UBERON:0000956,1.14e-28,25;UBERON:0000203,1.14e-28,25;UBERON:0001869,5.33e-26,32;UBERON:0001017,3.07e-25,81;UBERON:0001893,2.31e-24,34;UBERON:0001016,2.51e-22,89;UBERON:0002791,4.41e-22,32;UBERON:0003528,1.10e-20,34;UBERON:0002020,1.10e-20,34;UBERON:0002780,7.36e-20,41;UBERON:0001890,7.36e-20,41;UBERON:0003080,7.36e-20,41;UBERON:0006240,7.36e-20,41;UBERON:0000955,2.46e-19,68;UBERON:0006238,2.46e-19,68;UBERON:0001872,8.14e-18,5;UBERON:0003056,4.21e-17,61;UBERON:0000073,7.37e-15,53;UBERON:0002616,7.37e-15,53;UBERON:0001049,6.13e-14,56;UBERON:0005068,6.13e-14,56;UBERON:0006241,6.13e-14,56;UBERON:0007135,6.13e-14,56;UBERON:0004121,1.95e-13,171;UBERON:0000924,1.95e-13,171;UBERON:0006601,1.95e-13,171;UBERON:0003075,5.54e-12,82;UBERON:0007284,5.54e-12,82;UBERON:0002346,2.73e-11,86;UBERON:0010314,5.20e-11,132;UBERON:0011216,4.03e-09,223;UBERON:0000200,6.28e-09,6;UBERON:0010371,7.87e-09,104;UBERON:0001870,1.33e-08,3;UBERON:0001778,2.08e-08,3;UBERON:0001775,2.08e-08,3;UBERON:0002079,4.25e-07,1;UBERON:0002022,5.69e-07,1;UBERON:0002581,7.15e-07,1;UBERON:0007190,7.57e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0,1.93236528524877,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,3.86644406388848,3.51784157202132,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,1.28812398067792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,1.93866549219044,1.29875337426592,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0.611030144933625,4.74433805888995,5.43681331364613,5.74320722280005,0.134802265961354,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.54787429224455,0,0,0,0,0.264768380074501,0,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,1.35904206073614,1.67364554099733,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0.223171457441873,1.41085292222125,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,1.76173714308272,0,0.0788057072991982,0,0,0.179287339332845,0,2.1440859791201,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,2.8339315265117,0.159633859057151,0.205116364240755,3.27693205088234,0.414943514785307,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41828927698629,3.12431239445539,0.206686796501184,1.14148458349032,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,1.51277379194553,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,1.16969731731053,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0.143339583151451,0,1.01987235286372,2.18175345170189,0,0,0,0,0,0,0,0.203977659483963,0,2.02168778976659,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0.12729431655633,0.202117188958219,0.217716747896961,1.36893320434112,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0,1.93236528524877,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.927443239800615,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,3.86644406388848,3.51784157202132,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,1.28812398067792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,1.93866549219044,1.29875337426592,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0.611030144933625,4.74433805888995,5.43681331364613,5.74320722280005,0.134802265961354,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.54787429224455,0,0,0,0,0.264768380074501,0,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,1.35904206073614,1.67364554099733,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0.223171457441873,1.41085292222125,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,1.76173714308272,0,0.0788057072991982,0,0,0.179287339332845,0,2.1440859791201,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,2.8339315265117,0.159633859057151,0.205116364240755,3.27693205088234,0.414943514785307,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41828927698629,3.12431239445539,0.206686796501184,1.14148458349032,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,1.51277379194553,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,1.16969731731053,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0.143339583151451,0,1.01987235286372,2.18175345170189,0,0,0,0,0,0,0,0.203977659483963,0,2.02168778976659,0,0,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0.12729431655633,0.202117188958219,0.217716747896961,1.36893320434112,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p5@PTPRR | |short_description=p5@PTPRR | ||
}} | }} |
Latest revision as of 16:15, 24 September 2015
Short description: | p5@PTPRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPRR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001swf.1, uc001swg.1_5end |
EntrezGene: | PTPRR |
HGNC: | 9680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.54e-12 | 8 |
neuron | 3.42e-09 | 6 |
neuroblast | 3.42e-09 | 6 |
electrically signaling cell | 3.42e-09 | 6 |
ciliated cell | 2.08e-08 | 3 |
ciliated epithelial cell | 2.08e-08 | 3 |
multi-ciliated epithelial cell | 2.08e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.08e-08 | 3 |
neural cell | 4.96e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.76e-07 | 1 |