FFCP PHASE1:Hg19::chr9:118916228..118916241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |||
|TSSclassifier=strong | |||
|UniProt=Q13219 | |||
|association_with_transcript=145bp_to_ENST00000328252_5end | |||
|cluster_id=chr9:118916228..118916241,+ | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_18_at_PAPPA_5end | |||
|id=chr9:118916228..118916241,+ | |||
|ontology_enrichment_celltype=CL:0000192!2.06e-30!42;CL:0000514!2.06e-30!42;CL:0000187!1.20e-29!54;CL:0000359!1.04e-28!32;CL:0000680!1.70e-27!57;CL:0000056!1.70e-27!57;CL:0000355!1.70e-27!57;CL:0000183!3.47e-26!59;CL:0000393!1.45e-25!60;CL:0000211!1.45e-25!60;CL:0000055!3.43e-19!180;CL:0002539!1.06e-14!10;CL:0000222!5.26e-11!119;CL:0002594!2.82e-08!4;CL:0002494!7.32e-08!16;CL:0002541!5.02e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.80e-43;32!CL:0002539;2.36e-25;10!CL:0000192;2.25e-23;43!CL:0002541;1.17e-22;3!CL:0002592;1.06e-21;3!CL:0002589;2.15e-15;2!CL:0000187;1.03e-12;55!CL:0000393;1.40e-12;61!CL:0000211;1.40e-12;61!CL:0002494;7.42e-11;16!CL:0002591;2.20e-08;1!CL:0002594;3.86e-08;4!CL:0000569;5.61e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.63e-47,32;CL:0000192,3.39e-34,43;CL:0000514,3.39e-34,43;CL:0000187,4.01e-26,55;CL:0002539,2.48e-25,10;CL:0000680,1.26e-24,58;CL:0000056,1.26e-24,58;CL:0000355,1.26e-24,58;CL:0000393,2.82e-23,61;CL:0000211,2.82e-23,61;CL:0002541,7.56e-23,3;CL:0002592,1.58e-21,3;CL:0002589,3.46e-15,2;CL:0000222,5.95e-12,121;CL:0002494,8.90e-11,16;CL:0002594,2.75e-08,4;CL:0002591,3.06e-08,1;CL:0000569,6.25e-08,4;CL:0000011,6.25e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;2.25e-23;43!CL:0000355;4.05e-11;58!UBERON:0003124;5.58e-09;1!CL:0000011;5.61e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.55e-09;1!DOID:4549;7.55e-09;1!DOID:5861;7.55e-09;1!DOID:6496;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.56e-09,1;DOID:4549,7.56e-09,1;DOID:5861,7.56e-09,1;DOID:6496,7.56e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.58e-26!42;UBERON:0003509!6.58e-26!42;UBERON:0004572!6.58e-26!42;UBERON:0001134!5.77e-25!61;UBERON:0002036!5.77e-25!61;UBERON:0003082!5.77e-25!61;UBERON:0002385!7.99e-24!63;UBERON:0001015!7.99e-24!63;UBERON:0000383!7.99e-24!63;UBERON:0004290!8.63e-22!70;UBERON:0004573!3.07e-20!33;UBERON:0004571!3.07e-20!33;UBERON:0000914!3.68e-19!83;UBERON:0002329!3.68e-19!83;UBERON:0003077!3.68e-19!83;UBERON:0003059!3.68e-19!83;UBERON:0007282!3.68e-19!83;UBERON:0009618!3.68e-19!83;UBERON:0007285!3.68e-19!83;UBERON:0004872!3.24e-17!84;UBERON:0000486!5.15e-17!82;UBERON:0001135!6.12e-16!15;UBERON:0002049!7.30e-16!79;UBERON:0007798!7.30e-16!79;UBERON:0001981!1.68e-15!60;UBERON:0007500!1.68e-15!60;UBERON:0004537!1.68e-15!60;UBERON:0006965!1.68e-15!60;UBERON:0001009!4.27e-15!113;UBERON:0004535!6.90e-15!110;UBERON:0004237!1.06e-14!10;UBERON:0004695!1.06e-14!10;UBERON:0002111!1.06e-14!10;UBERON:0004178!1.06e-14!10;UBERON:0000055!2.09e-12!69;UBERON:0000947!1.21e-10!21;UBERON:0010191!1.21e-10!21;UBERON:0005256!2.15e-10!143;UBERON:0003914!7.99e-10!118;UBERON:0000490!8.26e-10!138;UBERON:0003498!1.64e-09!5;UBERON:0005985!1.64e-09!5;UBERON:0001310!2.82e-08!4;UBERON:0000948!4.17e-08!24;UBERON:0005498!4.17e-08!24;UBERON:0004140!4.17e-08!24;UBERON:0009881!4.17e-08!24;UBERON:0004141!4.17e-08!24;UBERON:0003084!4.17e-08!24;UBERON:0007005!4.17e-08!24;UBERON:0004139!4.17e-08!24;UBERON:0004291!4.17e-08!24;UBERON:0007100!4.36e-08!27;UBERON:0000476!5.02e-07!3;UBERON:0000920!5.02e-07!3;UBERON:0002100!9.08e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.28e-29;33!UBERON:0004571;1.28e-29;33!UBERON:0001637;2.90e-26;42!UBERON:0003509;2.90e-26;42!UBERON:0004572;2.90e-26;42!UBERON:0004237;2.36e-25;10!UBERON:0004695;2.36e-25;10!UBERON:0002111;2.36e-25;10!UBERON:0004178;2.36e-25;10!UBERON:0003124;1.17e-22;3!UBERON:0000920;1.17e-22;3!UBERON:0003498;1.06e-21;3!UBERON:0005985;1.06e-21;3!UBERON:0001621;1.06e-21;3!UBERON:0001135;9.30e-17;15!UBERON:0000947;4.63e-16;21!UBERON:0010191;4.63e-16;21!UBERON:0007500;7.81e-16;56!UBERON:0001981;7.81e-16;56!UBERON:0004537;7.81e-16;56!UBERON:0001529;2.15e-15;2!UBERON:0007204;2.15e-15;2!UBERON:0000055;8.60e-13;65!UBERON:0005631;7.58e-12;10!UBERON:0000158;7.58e-12;10!UBERON:0002049;1.63e-10;75!UBERON:0007798;1.63e-10;75!UBERON:0001310;3.86e-08;4!UBERON:0002385;6.74e-08;31!UBERON:0001015;6.74e-08;31!UBERON:0000383;6.74e-08;31!UBERON:0000948;7.63e-08;22!UBERON:0003914;7.72e-08;74!UBERON:0000478;1.81e-07;24!UBERON:0007100;7.06e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.06e-40,42;UBERON:0003509,3.06e-40,42;UBERON:0004572,3.06e-40,42;UBERON:0004573,6.33e-34,33;UBERON:0004571,6.33e-34,33;UBERON:0007500,8.85e-28,59;UBERON:0001981,8.85e-28,59;UBERON:0004537,8.85e-28,59;UBERON:0006965,8.85e-28,59;UBERON:0004872,2.31e-27,83;UBERON:0004237,2.48e-25,10;UBERON:0004695,2.48e-25,10;UBERON:0002111,2.48e-25,10;UBERON:0004178,2.48e-25,10;UBERON:0000055,1.06e-23,68;UBERON:0001134,7.45e-23,62;UBERON:0002036,7.45e-23,62;UBERON:0003082,7.45e-23,62;UBERON:0000920,7.56e-23,3;UBERON:0003498,1.77e-22,5;UBERON:0005985,1.77e-22,5;UBERON:0002385,4.73e-22,64;UBERON:0001015,4.73e-22,64;UBERON:0000383,4.73e-22,64;UBERON:0001621,1.58e-21,3;UBERON:0002049,2.85e-20,78;UBERON:0007798,2.85e-20,78;UBERON:0002329,1.34e-19,71;UBERON:0003059,1.34e-19,71;UBERON:0007282,1.34e-19,71;UBERON:0004290,1.34e-19,71;UBERON:0009618,1.34e-19,71;UBERON:0003077,2.75e-19,72;UBERON:0007285,2.75e-19,72;UBERON:0007524,5.53e-19,73;UBERON:0004535,1.18e-17,109;UBERON:0007503,1.39e-17,78;UBERON:0003124,2.78e-17,7;UBERON:0001009,4.34e-17,112;UBERON:0001135,9.59e-17,15;UBERON:0000486,2.36e-16,83;UBERON:0003914,3.27e-16,117;UBERON:0000947,4.81e-16,21;UBERON:0010191,4.81e-16,21;UBERON:0001529,3.46e-15,2;UBERON:0007204,3.46e-15,2;UBERON:0005631,5.52e-13,14;UBERON:0000158,5.52e-13,14;UBERON:0005256,3.21e-10,122;UBERON:0003081,3.58e-10,203;UBERON:0000948,5.54e-10,24;UBERON:0005498,5.54e-10,24;UBERON:0004140,5.54e-10,24;UBERON:0009881,5.54e-10,24;UBERON:0004141,5.54e-10,24;UBERON:0003084,5.54e-10,24;UBERON:0007005,5.54e-10,24;UBERON:0004139,5.54e-10,24;UBERON:0004291,5.54e-10,24;UBERON:0007100,8.08e-09,27;UBERON:0000025,1.79e-08,192;UBERON:0001310,2.75e-08,4;UBERON:0000490,6.24e-08,148;UBERON:0002204,8.86e-08,167;UBERON:0000478,1.75e-07,24;UBERON:0003104,3.97e-07,160;UBERON:0009142,3.97e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,3.36162573225888,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,5.16395805171553,0.573673241497627,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.404132016209064,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.38115775959256,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,5.98143458978216,0.6970372701606,0.616067160352178,1.06461206063404,1.73986598415015,1.11194531462352,2.00374841438788,0,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0.823611089208164,0.706874414074119,1.01091240786658,1.58510321173008,1.26377536871694,0,0.731140468893853,0,0,0.848432591722276,1.13008116620243,0,0.66343897524122,1.31535265576129,0.578775534266688,0,2.84074527747786,0.92947049429925,0.563391205064483,0,0,1.78335525740625,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82801391678303,1.64875668123352,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,4.23629408119201,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.76280561296425,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,1.08806040407946,1.47855149989634,0,0.449803112163605,0.621051827505038,0,0.265841714557995,0,0,0.380805212168795,0,0.545545977607678,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.71635536432595,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0.991486114072017,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,9.84596308805291,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@PAPPA | |||
}} |
Latest revision as of 17:52, 24 September 2015
Short description: | p18@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | 145bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.63e-47 | 32 |
smooth muscle cell | 3.39e-34 | 43 |
smooth muscle myoblast | 3.39e-34 | 43 |
muscle cell | 4.01e-26 | 55 |
aortic smooth muscle cell | 2.48e-25 | 10 |
muscle precursor cell | 1.26e-24 | 58 |
myoblast | 1.26e-24 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-24 | 58 |
electrically responsive cell | 2.82e-23 | 61 |
electrically active cell | 2.82e-23 | 61 |
chorionic membrane mesenchymal stem cell | 7.56e-23 | 3 |
smooth muscle cell of the coronary artery | 1.58e-21 | 3 |
smooth muscle cell of the brachiocephalic vasculature | 3.46e-15 | 2 |
mesodermal cell | 5.95e-12 | 121 |
cardiocyte | 8.90e-11 | 16 |
smooth muscle cell of the umbilical artery | 2.75e-08 | 4 |
smooth muscle cell of the pulmonary artery | 3.06e-08 | 1 |
cardiac mesenchymal cell | 6.25e-08 | 4 |
migratory trunk neural crest cell | 6.25e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.56e-09 | 1 |
extraosseous chondrosarcoma | 7.56e-09 | 1 |
myxoid chondrosarcoma | 7.56e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 7.56e-09 | 1 |