FFCP PHASE1:Hg19::chr22:39473269..39473296,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:39473269..39473296,+
|short_description=p1@APOBEC3G
|description=CAGE_peak_1_at_APOBEC3G_5end
|association_with_transcript=185bp_to_ENST00000480000_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60489 | |EntrezGene=60489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17357 | |HGNC=17357 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_ENST00000480000_5end | |||
|cluster_id=chr22:39473269..39473296,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_APOBEC3G_5end | |||
|id=chr22:39473269..39473296,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.97e-33!182;CL:0000037!2.66e-32!172;CL:0000566!2.66e-32!172;CL:0002032!5.71e-31!165;CL:0000837!5.71e-31!165;CL:0000738!1.04e-26!140;CL:0000542!1.18e-25!53;CL:0000051!1.18e-25!53;CL:0002087!2.37e-25!119;CL:0000838!3.16e-25!52;CL:0002031!1.21e-24!124;CL:0000134!2.67e-17!358;CL:0002320!9.41e-17!365;CL:0000048!1.36e-16!430;CL:0000723!5.23e-16!436;CL:0000034!6.90e-16!444;CL:0000084!1.59e-13!25;CL:0000827!1.59e-13!25;CL:0000219!1.02e-12!390;CL:0000791!3.29e-11!18;CL:0000789!3.29e-11!18;CL:0002420!3.29e-11!18;CL:0002419!3.29e-11!18;CL:0000790!3.29e-11!18;CL:0000945!5.70e-11!24;CL:0000826!5.70e-11!24;CL:0000763!6.31e-10!112;CL:0000049!6.31e-10!112;CL:0000625!8.98e-09!11;CL:0002371!2.63e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.41e-16;53!CL:0000084;5.23e-15;25!CL:0000791;1.46e-12;18!CL:0000789;1.46e-12;18!CL:0002419;1.46e-12;18!CL:0000945;5.04e-12;24!CL:0000625;7.25e-10;11!CL:0002087;7.51e-09;104!CL:0000988;8.28e-07;177!CL:0000738;9.78e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.03e-38,177;CL:0000037,1.54e-37,168;CL:0002032,1.57e-36,161;CL:0000837,1.57e-36,161;CL:0000738,1.58e-31,136;CL:0002087,1.35e-29,115;CL:0002031,3.16e-29,120;CL:0000542,4.74e-29,53;CL:0000051,4.74e-29,53;CL:0000838,1.46e-28,52;CL:0000134,4.15e-17,354;CL:0002320,3.67e-16,361;CL:0000084,3.33e-15,25;CL:0000827,3.33e-15,25;CL:0000048,1.22e-14,427;CL:0000723,3.12e-14,433;CL:0000034,6.80e-14,441;CL:0000791,1.46e-12,18;CL:0000789,1.46e-12,18;CL:0002420,1.46e-12,18;CL:0002419,1.46e-12,18;CL:0000790,1.46e-12,18;CL:0000945,2.72e-12,24;CL:0000826,2.72e-12,24;CL:0000219,3.76e-12,386;CL:0000763,6.83e-12,108;CL:0000049,6.83e-12,108;CL:0000625,8.71e-10,11;CL:0000766,1.51e-07,72;CL:0000236,1.90e-07,14;CL:0000839,4.17e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;1.41e-16;53!CL:0000790;1.46e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!6.23e-10!51;DOID:0060083!6.23e-10!51;DOID:1240!5.34e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.21e-10,51;DOID:0060083,4.21e-10,51;DOID:1240,1.30e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.70e-17!375;UBERON:0002390!5.76e-13!102;UBERON:0003061!5.76e-13!102;UBERON:0002193!1.28e-12!112;UBERON:0000178!3.70e-09!15;UBERON:0000179!3.70e-09!15;UBERON:0000463!3.70e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.38e-10;15!UBERON:0000179;3.38e-10;15!UBERON:0000463;3.38e-10;15!UBERON:0002390;5.29e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.86e-16,371;UBERON:0002390,6.73e-15,98;UBERON:0003061,6.73e-15,98;UBERON:0002193,1.36e-14,108;UBERON:0000178,3.17e-10,15;UBERON:0000179,3.17e-10,15;UBERON:0000463,3.17e-10,15;UBERON:0002405,1.62e-08,93 | |||
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| ||
|short_description=p1@APOBEC3G | |||
}} | }} |
Latest revision as of 17:53, 24 September 2015
Short description: | p1@APOBEC3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOBEC3G_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 185bp_to_ENST00000480000_5end |
EntrezGene: | APOBEC3G |
HGNC: | 17357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.86e-16 | 371 |
hematopoietic system | 6.73e-15 | 98 |
blood island | 6.73e-15 | 98 |
hemolymphoid system | 1.36e-14 | 108 |
blood | 3.17e-10 | 15 |
haemolymphatic fluid | 3.17e-10 | 15 |
organism substance | 3.17e-10 | 15 |
immune system | 1.62e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.21e-10 | 51 |
immune system cancer | 4.21e-10 | 51 |
leukemia | 1.30e-08 | 39 |