FFCP PHASE1:Hg19::chr9:120466661..120466687,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000472304_5end | |||
|cluster_id=chr9:120466661..120466687,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_TLR4_5end | |||
|id=chr9:120466661..120466687,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.32e-32!76;CL:0002194!1.21e-29!63;CL:0000576!1.21e-29!63;CL:0000040!1.21e-29!63;CL:0000559!1.21e-29!63;CL:0002009!1.20e-28!65;CL:0002057!1.15e-27!42;CL:0000839!4.63e-27!70;CL:0000557!9.78e-27!71;CL:0000860!1.86e-24!45;CL:0000763!2.48e-19!112;CL:0000049!2.48e-19!112;CL:0000738!1.40e-14!140;CL:0002087!8.48e-14!119;CL:0002031!1.00e-11!124;CL:0000037!4.80e-11!172;CL:0000566!4.80e-11!172;CL:0002032!1.99e-10!165;CL:0000837!1.99e-10!165;CL:0000988!7.22e-10!182;CL:0002139!8.91e-09!24;CL:0000115!1.24e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-21;33!CL:0002057;1.36e-21;33!CL:0000473;2.85e-21;39!CL:0000234;2.85e-21;39!CL:0000576;1.39e-19;48!CL:0000766;1.65e-15;69!CL:0002139;4.30e-09;24!CL:0000115;1.06e-07;36!CL:0000763;2.37e-07;100!CL:0000071;9.21e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.03e-36,72;CL:0002194,5.41e-34,59;CL:0000576,5.41e-34,59;CL:0000040,5.41e-34,59;CL:0000559,5.41e-34,59;CL:0000473,7.29e-33,48;CL:0000234,7.29e-33,48;CL:0002009,2.26e-32,61;CL:0000839,4.09e-30,66;CL:0000557,2.38e-29,67;CL:0000860,5.14e-29,42;CL:0002057,5.14e-29,42;CL:0000763,5.15e-21,108;CL:0000049,5.15e-21,108;CL:0000738,1.01e-15,136;CL:0002087,2.35e-15,115;CL:0002031,1.62e-12,120;CL:0000037,6.47e-12,168;CL:0002032,3.45e-11,161;CL:0000837,3.45e-11,161;CL:0000988,2.97e-10,177;CL:0002139,3.78e-09,24;CL:0000115,5.44e-09,36;CL:0000071,8.12e-07,18;CL:0002546,8.12e-07,18;CL:0002393,9.21e-07,9;CL:0002397,9.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.96e-21;42!CL:0000049;2.87e-07;108!CL:0002546;9.21e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.08e-30!216;UBERON:0002193!1.77e-29!112;UBERON:0002390!1.19e-27!102;UBERON:0003061!1.19e-27!102;UBERON:0002371!1.77e-25!80;UBERON:0001474!2.56e-22!86;UBERON:0007023!2.70e-22!115;UBERON:0002405!3.00e-22!115;UBERON:0004765!1.23e-15!101;UBERON:0001434!1.23e-15!101;UBERON:0001009!1.88e-15!113;UBERON:0004535!6.49e-15!110;UBERON:0002204!3.62e-13!167;UBERON:0002049!6.26e-10!79;UBERON:0007798!6.26e-10!79;UBERON:0000479!1.30e-09!787;UBERON:0000467!2.06e-09!625;UBERON:0004872!2.94e-09!84;UBERON:0000480!3.57e-09!626;UBERON:0000055!4.11e-09!69;UBERON:0000468!7.93e-09!659;UBERON:0001981!1.49e-08!60;UBERON:0007500!1.49e-08!60;UBERON:0004537!1.49e-08!60;UBERON:0006965!1.49e-08!60;UBERON:0000025!6.62e-08!194;UBERON:0001049!1.79e-07!57;UBERON:0005068!1.79e-07!57;UBERON:0006241!1.79e-07!57;UBERON:0007135!1.79e-07!57;UBERON:0000926!1.83e-07!448;UBERON:0004120!1.83e-07!448;UBERON:0006603!1.83e-07!448;UBERON:0002050!1.98e-07!605;UBERON:0005423!1.98e-07!605;UBERON:0002616!2.23e-07!59;UBERON:0000923!2.57e-07!604;UBERON:0005291!2.57e-07!604;UBERON:0006598!2.57e-07!604;UBERON:0002532!2.57e-07!604;UBERON:0000922!2.58e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.21e-07;18!UBERON:0001986;9.21e-07;18!UBERON:0004852;9.21e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.52e-35,203;UBERON:0002193,4.15e-32,108;UBERON:0002390,1.98e-30,98;UBERON:0003061,1.98e-30,98;UBERON:0002405,7.83e-28,93;UBERON:0002371,8.56e-28,76;UBERON:0001474,1.11e-24,82;UBERON:0007023,4.87e-23,114;UBERON:0004765,3.52e-21,90;UBERON:0000926,2.10e-20,315;UBERON:0004120,2.10e-20,315;UBERON:0006603,2.10e-20,315;UBERON:0001434,2.91e-17,100;UBERON:0001009,2.63e-15,112;UBERON:0004535,9.50e-15,109;UBERON:0002204,1.33e-12,167;UBERON:0000923,2.37e-10,560;UBERON:0010316,2.37e-10,560;UBERON:0005291,2.37e-10,560;UBERON:0006598,2.37e-10,560;UBERON:0010317,2.37e-10,560;UBERON:0002532,2.37e-10,560;UBERON:0002050,6.66e-10,564;UBERON:0004872,2.10e-09,83;UBERON:0002049,2.59e-09,78;UBERON:0007798,2.59e-09,78;UBERON:0000922,7.02e-09,592;UBERON:0000055,7.64e-09,68;UBERON:0000479,1.91e-08,773;UBERON:0007500,2.84e-08,59;UBERON:0001981,2.84e-08,59;UBERON:0004537,2.84e-08,59;UBERON:0006965,2.84e-08,59;UBERON:0005423,5.30e-08,581;UBERON:0000025,1.63e-07,192;UBERON:0001049,2.81e-07,56;UBERON:0005068,2.81e-07,56;UBERON:0006241,2.81e-07,56;UBERON:0007135,2.81e-07,56;UBERON:0004638,8.12e-07,18;UBERON:0001986,8.12e-07,18;UBERON:0004852,8.12e-07,18 | |||
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| |||
|short_description=p1@TLR4 | |||
}} |
Latest revision as of 18:53, 24 September 2015
Short description: | p1@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000472304_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.03e-36 | 72 |
monopoietic cell | 5.41e-34 | 59 |
monocyte | 5.41e-34 | 59 |
monoblast | 5.41e-34 | 59 |
promonocyte | 5.41e-34 | 59 |
defensive cell | 7.29e-33 | 48 |
phagocyte | 7.29e-33 | 48 |
macrophage dendritic cell progenitor | 2.26e-32 | 61 |
myeloid lineage restricted progenitor cell | 4.09e-30 | 66 |
granulocyte monocyte progenitor cell | 2.38e-29 | 67 |
classical monocyte | 5.14e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.14e-29 | 42 |
myeloid cell | 5.15e-21 | 108 |
common myeloid progenitor | 5.15e-21 | 108 |
leukocyte | 1.01e-15 | 136 |
nongranular leukocyte | 2.35e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.62e-12 | 120 |
hematopoietic stem cell | 6.47e-12 | 168 |
hematopoietic oligopotent progenitor cell | 3.45e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-11 | 161 |
hematopoietic cell | 2.97e-10 | 177 |
endothelial cell of vascular tree | 3.78e-09 | 24 |
endothelial cell | 5.44e-09 | 36 |
blood vessel endothelial cell | 8.12e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.12e-07 | 18 |
intermediate monocyte | 9.21e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.21e-07 | 9 |