FFCP PHASE1:Hg19::chr3:130612961..130612972,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:130612961..130612972,+
|short_description=p10@ATP2C1
|description=CAGE_peak_10_at_ATP2C1_5end
|association_with_transcript=-49bp_to_ENST00000504948,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27032 | |EntrezGene=27032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13211 | |HGNC=13211 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000504948,ENST00000513801,uc003enk.2,uc003enl.2,uc003enm.2,uc003enn.2_5end | |||
|cluster_id=chr3:130612961..130612972,+ | |||
|description=CAGE_peak_10_at_ATP2C1_5end | |||
|id=chr3:130612961..130612972,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.29e-13!180;CL:0000359!1.18e-11!32;CL:0000192!2.21e-08!42;CL:0000514!2.21e-08!42;CL:0000057!7.16e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.48e-16;32!CL:0002494;1.39e-10;16!CL:0000192;8.16e-10;43!CL:0002539;3.87e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.66e-18,32;CL:0000192,1.57e-13,43;CL:0000514,1.57e-13,43;CL:0002494,8.79e-11,16;CL:0000680,1.11e-10,58;CL:0000056,1.11e-10,58;CL:0000355,1.11e-10,58;CL:0000187,2.43e-10,55;CL:0000048,4.75e-10,427;CL:0000723,1.92e-09,433;CL:0000034,4.73e-09,441;CL:0000393,2.04e-08,61;CL:0000211,2.04e-08,61;CL:0002539,1.68e-07,10;CL:0000057,4.48e-07,76;CL:0000222,8.58e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;8.16e-10;43 | |||
|ontology_enrichment_disease=DOID:193!4.52e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:193;6.42e-09;29!DOID:2394;1.92e-08;14!DOID:120;1.50e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,6.11e-09,29;DOID:2394,2.27e-08,14;DOID:120,1.51e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.47e-11!42;UBERON:0003509!2.47e-11!42;UBERON:0004572!2.47e-11!42;UBERON:0004872!4.10e-11!84;UBERON:0004573!3.39e-10!33;UBERON:0004571!3.39e-10!33;UBERON:0002049!1.10e-09!79;UBERON:0007798!1.10e-09!79;UBERON:0001981!5.77e-09!60;UBERON:0007500!5.77e-09!60;UBERON:0004537!5.77e-09!60;UBERON:0006965!5.77e-09!60;UBERON:0000914!1.05e-08!83;UBERON:0002329!1.05e-08!83;UBERON:0003077!1.05e-08!83;UBERON:0003059!1.05e-08!83;UBERON:0007282!1.05e-08!83;UBERON:0009618!1.05e-08!83;UBERON:0007285!1.05e-08!83;UBERON:0000055!3.70e-08!69;UBERON:0000486!7.55e-08!82;UBERON:0005256!1.15e-07!143;UBERON:0000477!1.16e-07!286;UBERON:0004535!1.91e-07!110;UBERON:0003914!2.64e-07!118;UBERON:0004290!2.79e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.40e-13;33!UBERON:0004571;5.40e-13;33!UBERON:0001637;2.17e-10;42!UBERON:0003509;2.17e-10;42!UBERON:0004572;2.17e-10;42!UBERON:0000948;7.44e-08;22!UBERON:0000947;8.94e-08;21!UBERON:0010191;8.94e-08;21!UBERON:0004237;3.87e-07;10!UBERON:0004695;3.87e-07;10!UBERON:0002111;3.87e-07;10!UBERON:0004178;3.87e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.69e-16,83;UBERON:0001637,1.32e-15,42;UBERON:0003509,1.32e-15,42;UBERON:0004572,1.32e-15,42;UBERON:0004573,2.52e-14,33;UBERON:0004571,2.52e-14,33;UBERON:0003914,4.06e-13,117;UBERON:0000486,4.05e-12,83;UBERON:0007500,5.26e-12,59;UBERON:0001981,5.26e-12,59;UBERON:0004537,5.26e-12,59;UBERON:0006965,5.26e-12,59;UBERON:0005256,8.25e-12,122;UBERON:0002329,8.80e-12,71;UBERON:0003059,8.80e-12,71;UBERON:0007282,8.80e-12,71;UBERON:0004290,8.80e-12,71;UBERON:0009618,8.80e-12,71;UBERON:0003077,1.88e-11,72;UBERON:0007285,1.88e-11,72;UBERON:0007524,3.91e-11,73;UBERON:0001134,4.41e-10,62;UBERON:0002036,4.41e-10,62;UBERON:0003082,4.41e-10,62;UBERON:0004535,4.88e-10,109;UBERON:0007503,1.11e-09,78;UBERON:0000490,1.14e-09,148;UBERON:0000055,1.14e-09,68;UBERON:0002049,1.28e-09,78;UBERON:0007798,1.28e-09,78;UBERON:0002385,1.87e-09,64;UBERON:0001015,1.87e-09,64;UBERON:0000383,1.87e-09,64;UBERON:0001009,2.13e-09,112;UBERON:0000948,3.75e-08,24;UBERON:0005498,3.75e-08,24;UBERON:0004140,3.75e-08,24;UBERON:0009881,3.75e-08,24;UBERON:0004141,3.75e-08,24;UBERON:0003084,3.75e-08,24;UBERON:0007005,3.75e-08,24;UBERON:0004139,3.75e-08,24;UBERON:0004291,3.75e-08,24;UBERON:0000947,1.17e-07,21;UBERON:0010191,1.17e-07,21;UBERON:0003104,1.44e-07,160;UBERON:0009142,1.44e-07,160;UBERON:0004237,1.68e-07,10;UBERON:0004695,1.68e-07,10;UBERON:0002111,1.68e-07,10;UBERON:0004178,1.68e-07,10;UBERON:0003102,5.05e-07,99;UBERON:0004111,7.96e-07,240 | |||
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| ||
|short_description=p10@ATP2C1 | |||
}} | }} |
Latest revision as of 19:09, 24 September 2015
Short description: | p10@ATP2C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ATP2C1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000504948, ENST00000513801, uc003enk.2, uc003enl.2, uc003enm.2, uc003enn.2_5end |
EntrezGene: | ATP2C1 |
HGNC: | 13211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.66e-18 | 32 |
smooth muscle cell | 1.57e-13 | 43 |
smooth muscle myoblast | 1.57e-13 | 43 |
cardiocyte | 8.79e-11 | 16 |
muscle precursor cell | 1.11e-10 | 58 |
myoblast | 1.11e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-10 | 58 |
muscle cell | 2.43e-10 | 55 |
multi fate stem cell | 4.75e-10 | 427 |
somatic stem cell | 1.92e-09 | 433 |
stem cell | 4.73e-09 | 441 |
electrically responsive cell | 2.04e-08 | 61 |
electrically active cell | 2.04e-08 | 61 |
aortic smooth muscle cell | 1.68e-07 | 10 |
fibroblast | 4.48e-07 | 76 |
mesodermal cell | 8.58e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 6.11e-09 | 29 |
ovarian cancer | 2.27e-08 | 14 |
female reproductive organ cancer | 1.51e-07 | 27 |