FFCP PHASE1:Hg19::chr20:23342653..23342680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64412 | |EntrezGene=64412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15808 | |HGNC=15808 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2R0 | |UniProt=F5H2R0 | ||
|association_with_transcript=-106bp_to_ENST00000544236_5end | |association_with_transcript=-106bp_to_ENST00000544236_5end | ||
|cluster_id=chr20:23342653..23342680,+ | |||
|description=CAGE_peak_3_at_GZF1_5end | |description=CAGE_peak_3_at_GZF1_5end | ||
|id=chr20:23342653..23342680,+ | |id=chr20:23342653..23342680,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.25e-10!140;CL:0000037!5.55e-10!172;CL:0000566!5.55e-10!172;CL:0002031!1.57e-09!124;CL:0002087!1.93e-09!119;CL:0000791!2.42e-09!18;CL:0000789!2.42e-09!18;CL:0002420!2.42e-09!18;CL:0002419!2.42e-09!18;CL:0000790!2.42e-09!18;CL:0000988!2.45e-08!182;CL:0000838!3.95e-08!52;CL:0002032!5.25e-08!165;CL:0000837!5.25e-08!165;CL:0000542!1.03e-07!53;CL:0000051!1.03e-07!53;CL:0000084!8.76e-07!25;CL:0000827!8.76e-07!25 | |ontology_enrichment_celltype=CL:0000738!3.25e-10!140;CL:0000037!5.55e-10!172;CL:0000566!5.55e-10!172;CL:0002031!1.57e-09!124;CL:0002087!1.93e-09!119;CL:0000791!2.42e-09!18;CL:0000789!2.42e-09!18;CL:0002420!2.42e-09!18;CL:0002419!2.42e-09!18;CL:0000790!2.42e-09!18;CL:0000988!2.45e-08!182;CL:0000838!3.95e-08!52;CL:0002032!5.25e-08!165;CL:0000837!5.25e-08!165;CL:0000542!1.03e-07!53;CL:0000051!1.03e-07!53;CL:0000084!8.76e-07!25;CL:0000827!8.76e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.65e-11;18!CL:0000789;2.65e-11;18!CL:0002419;2.65e-11;18!CL:0000784;2.79e-09;3!CL:0000623;7.12e-09;3!CL:0000624;4.76e-08;6!CL:0000084;1.19e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.99e-11,18;CL:0000789,1.99e-11,18;CL:0002420,1.99e-11,18;CL:0002419,1.99e-11,18;CL:0000790,1.99e-11,18;CL:0000784,2.92e-09,3;CL:0000738,9.02e-09,136;CL:0000623,1.27e-08,3;CL:0000825,1.27e-08,3;CL:0000838,1.33e-08,52;CL:0000542,2.24e-08,53;CL:0000051,2.24e-08,53;CL:0000624,3.66e-08,6;CL:0000084,9.79e-08,25;CL:0000827,9.79e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.78e-15!57;UBERON:0005068!3.78e-15!57;UBERON:0006241!3.78e-15!57;UBERON:0007135!3.78e-15!57;UBERON:0000955!2.08e-13!69;UBERON:0006238!2.08e-13!69;UBERON:0001017!3.23e-13!82;UBERON:0002780!5.23e-13!41;UBERON:0001890!5.23e-13!41;UBERON:0006240!5.23e-13!41;UBERON:0005743!8.04e-13!86;UBERON:0002020!2.02e-12!34;UBERON:0003528!2.02e-12!34;UBERON:0003080!2.52e-12!42;UBERON:0001893!2.73e-12!34;UBERON:0002791!7.95e-12!33;UBERON:0002616!8.36e-12!59;UBERON:0001869!1.78e-11!32;UBERON:0000073!2.33e-11!94;UBERON:0001016!2.33e-11!94;UBERON:0007023!1.15e-10!115;UBERON:0001950!1.12e-09!20;UBERON:0002346!1.30e-09!90;UBERON:0002619!2.58e-09!22;UBERON:0000956!3.98e-09!25;UBERON:0000203!3.98e-09!25;UBERON:0003075!9.73e-09!86;UBERON:0007284!9.73e-09!86;UBERON:0003056!8.27e-08!61 | |ontology_enrichment_uberon=UBERON:0001049!3.78e-15!57;UBERON:0005068!3.78e-15!57;UBERON:0006241!3.78e-15!57;UBERON:0007135!3.78e-15!57;UBERON:0000955!2.08e-13!69;UBERON:0006238!2.08e-13!69;UBERON:0001017!3.23e-13!82;UBERON:0002780!5.23e-13!41;UBERON:0001890!5.23e-13!41;UBERON:0006240!5.23e-13!41;UBERON:0005743!8.04e-13!86;UBERON:0002020!2.02e-12!34;UBERON:0003528!2.02e-12!34;UBERON:0003080!2.52e-12!42;UBERON:0001893!2.73e-12!34;UBERON:0002791!7.95e-12!33;UBERON:0002616!8.36e-12!59;UBERON:0001869!1.78e-11!32;UBERON:0000073!2.33e-11!94;UBERON:0001016!2.33e-11!94;UBERON:0007023!1.15e-10!115;UBERON:0001950!1.12e-09!20;UBERON:0002346!1.30e-09!90;UBERON:0002619!2.58e-09!22;UBERON:0000956!3.98e-09!25;UBERON:0000203!3.98e-09!25;UBERON:0003075!9.73e-09!86;UBERON:0007284!9.73e-09!86;UBERON:0003056!8.27e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.95e-14;20!UBERON:0003528;2.81e-13;34!UBERON:0002020;2.81e-13;34!UBERON:0002619;1.59e-12;22!UBERON:0002791;3.00e-11;32!UBERON:0001869;3.01e-11;32!UBERON:0000956;8.37e-11;25!UBERON:0000203;8.37e-11;25!UBERON:0001893;2.02e-10;34!UBERON:0002780;3.70e-08;41!UBERON:0001890;3.70e-08;41!UBERON:0000955;3.93e-08;68!UBERON:0000073;2.43e-07;53!UBERON:0002616;2.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.72e-14,34;UBERON:0002020,1.72e-14,34;UBERON:0001950,4.16e-14,20;UBERON:0001017,1.71e-13,81;UBERON:0002791,1.87e-13,32;UBERON:0001869,1.87e-13,32;UBERON:0002619,1.15e-12,22;UBERON:0000955,1.54e-12,68;UBERON:0006238,1.54e-12,68;UBERON:0001893,1.71e-12,34;UBERON:0000073,2.12e-12,53;UBERON:0002616,2.12e-12,53;UBERON:0001016,1.42e-11,89;UBERON:0001049,1.64e-11,56;UBERON:0005068,1.64e-11,56;UBERON:0006241,1.64e-11,56;UBERON:0007135,1.64e-11,56;UBERON:0002780,1.84e-11,41;UBERON:0001890,1.84e-11,41;UBERON:0003080,1.84e-11,41;UBERON:0006240,1.84e-11,41;UBERON:0000956,6.32e-11,25;UBERON:0000203,6.32e-11,25;UBERON:0007023,2.67e-07,114 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.157421562627358,0,0.767658796194425,1.54816123316076,0,0,0,0.697204805222715,0.284338464974843,0.587200878669695,1.10799081706375,0.401088894940283,0.651032612147555,0,0.32389366601898,0,0.581592955118259,0.755751887377619,0,0.697287110717054,0,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,1.29096936716765,0,0.941211697713023,0.272906150057846,0.449446968890169,0.306083892370903,0,0.639337125799041,0.659702600373432,1.19678194572979,0.852449501065388,0.290209238628584,0,0,1.50749199154046,0.521482918420201,0.65156653411535,0.605399502633369,2.20966581592539,0.316462387440884,0,0,0,0.44931452458598,0,0.803627933485401,0,0.79566670879636,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,1.1384259382189,1.76171156811282,1.52909291250092,2.64342657158052,0,1.31692042387539,2.75393678159366,1.17903228824749,2.05601498999509,0,1.95553359980154,1.89379122293893,0,0.111410456885174,0.883817722424512,0.443067789167242,0,0,0.130059347559878,0,0,0,1.77943875794473,0.802622484269139,0,0.113309342697566,0.766440987203842,1.37450978193052,1.01207876807801,0.318565414324097,0,1.90090408889675,0.752875595388864,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,1.00803371612366,1.87208137048455,2.02754165435919,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.189069634328136,0,0,2.0956652079634,0,0.741568885568859,0,0.174129737299267,0,1.19245312152671,2.28797964312051,1.48583000531826,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0.397589304964456,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,1.7658523976586,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.463721619900307,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0.784596007954691,1.57624608161542,1.07813787429759,1.15508732651774,0,1.30139853857622,0,1.67516265334349,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0,0.620304078368662,0.215714200818617,1.17400313583789,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0.231046011313244,0,0,0.211103257785751,1.13733384070897,0,0,0,0,0,0,0,0.223874754722178,1.31555925987561,0.784306353074702,0,0.328014645699706,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0.952927101831156,0,0,0,0,0,0,0.490080431962063,0,0.28853842595289,0.284567373393656,0.478278818186467,0.199579371432817,0,0.423347165447766,0,0.561594356226918,0,0.313359791546046,0,0,0.321176150207399,0,0.425846237690326,0.343505344755765,0,0,0,0.390776190804081,0.556812347790485,0,0,0.66614393599564,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0.307160702099232,1.9882952955326,0.562677665642051,0.111308705022906,0,0.422250816255987,0.19924798825107,0,1.0077309914171,0.20453736500431,0.369254416383208,0.622079175323615,0.449341755736634,0,0.511572370226872,0.197286811273867,0,0,3.87733098438087,1.85536196323703,1.99613798001194,0.260427761085233,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0.347249989866585,1.77148277162768,0.482385754501632,0,0.995213339381022,3.54657142744257,1.97446857438575,0.10893846351899,0,0.461701551022782,0.569710279235006,0.46112780877612,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0.2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| ||
|short_description=p3@GZF1 | |short_description=p3@GZF1 | ||
}} | }} |
Latest revision as of 20:09, 24 September 2015
Short description: | p3@GZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GZF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -106bp_to_ENST00000544236_5end |
EntrezGene: | GZF1 |
HGNC: | 15808 |
UniProt: | F5H2R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.99e-11 | 18 |
alpha-beta T cell | 1.99e-11 | 18 |
immature T cell | 1.99e-11 | 18 |
mature T cell | 1.99e-11 | 18 |
immature alpha-beta T cell | 1.99e-11 | 18 |
plasmacytoid dendritic cell | 2.92e-09 | 3 |
leukocyte | 9.02e-09 | 136 |
natural killer cell | 1.27e-08 | 3 |
pro-NK cell | 1.27e-08 | 3 |
lymphoid lineage restricted progenitor cell | 1.33e-08 | 52 |
lymphocyte | 2.24e-08 | 53 |
common lymphoid progenitor | 2.24e-08 | 53 |
CD4-positive, alpha-beta T cell | 3.66e-08 | 6 |
T cell | 9.79e-08 | 25 |
pro-T cell | 9.79e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.72e-14 | 34 |
gray matter | 1.72e-14 | 34 |
neocortex | 4.16e-14 | 20 |
central nervous system | 1.71e-13 | 81 |
regional part of telencephalon | 1.87e-13 | 32 |
cerebral hemisphere | 1.87e-13 | 32 |
regional part of cerebral cortex | 1.15e-12 | 22 |
brain | 1.54e-12 | 68 |
future brain | 1.54e-12 | 68 |
telencephalon | 1.71e-12 | 34 |
regional part of nervous system | 2.12e-12 | 53 |
regional part of brain | 2.12e-12 | 53 |
nervous system | 1.42e-11 | 89 |
neural tube | 1.64e-11 | 56 |
neural rod | 1.64e-11 | 56 |
future spinal cord | 1.64e-11 | 56 |
neural keel | 1.64e-11 | 56 |
regional part of forebrain | 1.84e-11 | 41 |
forebrain | 1.84e-11 | 41 |
anterior neural tube | 1.84e-11 | 41 |
future forebrain | 1.84e-11 | 41 |
cerebral cortex | 6.32e-11 | 25 |
pallium | 6.32e-11 | 25 |
adult organism | 2.67e-07 | 114 |