FFCP PHASE1:Hg19::chr18:9102592..9102603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4729 | |EntrezGene=4729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7717 | |HGNC=7717 | ||
|TSSclassifier=strong | |||
|UniProt=P19404 | |UniProt=P19404 | ||
|association_with_transcript=-24bp_to_ENST00000318388,NM_021074_5end | |association_with_transcript=-24bp_to_ENST00000318388,NM_021074_5end | ||
|cluster_id=chr18:9102592..9102603,+ | |||
|description=CAGE_peak_2_at_NDUFV2_5end | |description=CAGE_peak_2_at_NDUFV2_5end | ||
|id=chr18:9102592..9102603,+ | |id=chr18:9102592..9102603,+ | ||
|ontology_enrichment_celltype=CL:0000393!2.64e-16!60;CL:0000211!2.64e-16!60;CL:0000680!2.23e-15!57;CL:0000056!2.23e-15!57;CL:0000355!2.23e-15!57;CL:0000187!1.78e-14!54;CL:0000183!4.18e-13!59;CL:0000192!1.41e-12!42;CL:0000514!1.41e-12!42;CL:0000055!4.07e-10!180;CL:0000359!2.69e-09!32;CL:0000222!4.50e-09!119;CL:0002321!7.52e-08!248;CL:0000220!1.35e-07!246 | |ontology_enrichment_celltype=CL:0000393!2.64e-16!60;CL:0000211!2.64e-16!60;CL:0000680!2.23e-15!57;CL:0000056!2.23e-15!57;CL:0000355!2.23e-15!57;CL:0000187!1.78e-14!54;CL:0000183!4.18e-13!59;CL:0000192!1.41e-12!42;CL:0000514!1.41e-12!42;CL:0000055!4.07e-10!180;CL:0000359!2.69e-09!32;CL:0000222!4.50e-09!119;CL:0002321!7.52e-08!248;CL:0000220!1.35e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.98e-09;55!CL:0000359;5.61e-09;32!CL:0000192;1.56e-08;43!CL:0000393;5.21e-08;61!CL:0000211;5.21e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.79e-16,61;CL:0000211,7.79e-16,61;CL:0000680,6.80e-15,58;CL:0000056,6.80e-15,58;CL:0000355,6.80e-15,58;CL:0000187,5.60e-14,55;CL:0000192,3.63e-12,43;CL:0000514,3.63e-12,43;CL:0000359,1.20e-09,32;CL:0000222,8.02e-09,121;CL:0002321,3.18e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.56e-08;43!CL:0000355;1.80e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.01e-19!70;UBERON:0000914!1.47e-18!83;UBERON:0002329!1.47e-18!83;UBERON:0003077!1.47e-18!83;UBERON:0003059!1.47e-18!83;UBERON:0007282!1.47e-18!83;UBERON:0009618!1.47e-18!83;UBERON:0007285!1.47e-18!83;UBERON:0000486!3.04e-18!82;UBERON:0001134!1.03e-16!61;UBERON:0002036!1.03e-16!61;UBERON:0003082!1.03e-16!61;UBERON:0002385!2.30e-15!63;UBERON:0001015!2.30e-15!63;UBERON:0000383!2.30e-15!63;UBERON:0005256!2.04e-10!143;UBERON:0000119!8.47e-09!312;UBERON:0000490!1.02e-08!138;UBERON:0000483!1.74e-08!309;UBERON:0000922!4.28e-08!612;UBERON:0002204!4.84e-08!167;UBERON:0000923!9.91e-08!604;UBERON:0005291!9.91e-08!604;UBERON:0006598!9.91e-08!604;UBERON:0002532!9.91e-08!604;UBERON:0002050!1.16e-07!605;UBERON:0005423!1.16e-07!605;UBERON:0004872!2.62e-07!84;UBERON:0002100!3.62e-07!216;UBERON:0001637!4.16e-07!42;UBERON:0003509!4.16e-07!42;UBERON:0004572!4.16e-07!42;UBERON:0000481!5.50e-07!347;UBERON:0002049!7.32e-07!79;UBERON:0007798!7.32e-07!79;UBERON:0000468!7.47e-07!659;UBERON:0001981!7.66e-07!60;UBERON:0007500!7.66e-07!60;UBERON:0004537!7.66e-07!60;UBERON:0006965!7.66e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.30e-08;31!UBERON:0001015;1.30e-08;31!UBERON:0000383;1.30e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.30e-18,71;UBERON:0003059,1.30e-18,71;UBERON:0007282,1.30e-18,71;UBERON:0004290,1.30e-18,71;UBERON:0009618,1.30e-18,71;UBERON:0003077,1.51e-18,72;UBERON:0007285,1.51e-18,72;UBERON:0000486,8.20e-18,83;UBERON:0007524,9.19e-18,73;UBERON:0007503,2.09e-16,78;UBERON:0001134,3.02e-16,62;UBERON:0002036,3.02e-16,62;UBERON:0003082,3.02e-16,62;UBERON:0002385,4.64e-15,64;UBERON:0001015,4.64e-15,64;UBERON:0000383,4.64e-15,64;UBERON:0005256,2.86e-10,122;UBERON:0000490,6.11e-10,148;UBERON:0003104,2.67e-09,160;UBERON:0009142,2.67e-09,160;UBERON:0002204,3.29e-09,167;UBERON:0005423,1.56e-08,581;UBERON:0000923,1.81e-08,560;UBERON:0010316,1.81e-08,560;UBERON:0005291,1.81e-08,560;UBERON:0006598,1.81e-08,560;UBERON:0010317,1.81e-08,560;UBERON:0002532,1.81e-08,560;UBERON:0002050,2.81e-08,564;UBERON:0000922,3.11e-08,592;UBERON:0000119,1.01e-07,309;UBERON:0000926,1.28e-07,315;UBERON:0004120,1.28e-07,315;UBERON:0006603,1.28e-07,315;UBERON:0000483,1.99e-07,306;UBERON:0001637,2.81e-07,42;UBERON:0003509,2.81e-07,42;UBERON:0004572,2.81e-07,42;UBERON:0004872,3.02e-07,83;UBERON:0002100,4.63e-07,199;UBERON:0002049,7.01e-07,78;UBERON:0007798,7.01e-07,78;UBERON:0007500,7.36e-07,59;UBERON:0001981,7.36e-07,59;UBERON:0004537,7.36e-07,59;UBERON:0006965,7.36e-07,59 | |||
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| ||
|short_description=p2@NDUFV2 | |short_description=p2@NDUFV2 | ||
}} | }} |
Latest revision as of 21:26, 24 September 2015
Short description: | p2@NDUFV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDUFV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000318388, NM_021074_5end |
EntrezGene: | NDUFV2 |
HGNC: | 7717 |
UniProt: | P19404 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.79e-16 | 61 |
electrically active cell | 7.79e-16 | 61 |
muscle precursor cell | 6.80e-15 | 58 |
myoblast | 6.80e-15 | 58 |
multi-potent skeletal muscle stem cell | 6.80e-15 | 58 |
muscle cell | 5.60e-14 | 55 |
smooth muscle cell | 3.63e-12 | 43 |
smooth muscle myoblast | 3.63e-12 | 43 |
vascular associated smooth muscle cell | 1.20e-09 | 32 |
mesodermal cell | 8.02e-09 | 121 |
embryonic cell | 3.18e-07 | 250 |