FFCP PHASE1:Hg19::chr17:46692318..46692362,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |||
|TSSclassifier=strong | |||
|UniProt=P17481,Q8N8T3 | |||
|association_with_transcript=-17bp_to_NM_024016,uc002inw.2_5end | |||
|cluster_id=chr17:46692318..46692362,- | |||
|coexpression_cluster_id=C3646 | |||
|description=CAGE_peak_5_at_HOXB8_5end | |||
|id=chr17:46692318..46692362,- | |||
|ontology_enrichment_celltype=CL:1000449!9.67e-15!16;CL:1000497!1.29e-14!18;CL:0002518!1.29e-14!18;CL:1000507!2.49e-13!12;CL:1000494!2.49e-13!12;CL:0002681!1.34e-11!13;CL:0002584!1.34e-11!13;CL:0000066!2.30e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.64e-23;17!CL:0002518;2.64e-23;17!CL:1000449;1.01e-22;15!CL:1000507;7.79e-20;10!CL:1000494;7.79e-20;10!CL:0002681;4.06e-16;12!CL:0002584;4.06e-16;12!CL:1000746;4.28e-09;7!CL:1000612;4.28e-09;7!CL:0000239;1.37e-08;3!CL:1000615;1.37e-08;3!CL:0002306;1.37e-08;3!CL:0002564;6.09e-08;3!CL:0002579;8.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.31e-23,17;CL:0002518,3.31e-23,17;CL:1000449,1.41e-22,15;CL:1000507,1.02e-19,10;CL:1000494,1.02e-19,10;CL:0002681,5.39e-16,12;CL:0002584,5.39e-16,12;CL:1000746,4.86e-09,7;CL:1000612,4.86e-09,7;CL:0000239,1.65e-08,3;CL:1000615,1.65e-08,3;CL:0002306,1.65e-08,3;CL:0002564,7.63e-08,3;CL:0002579,9.73e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.59e-09;3!UBERON:0003057;1.59e-09;3 | |||
|ontology_enrichment_disease=DOID:0050687!9.53e-10!143;DOID:14566!1.65e-08!239;DOID:162!3.63e-08!235;DOID:305!1.03e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.60e-20!32;UBERON:0000080!7.04e-17!18;UBERON:0002120!7.04e-17!18;UBERON:0004875!7.04e-17!18;UBERON:0005721!7.04e-17!18;UBERON:0005754!7.04e-17!18;UBERON:0007297!7.04e-17!18;UBERON:0002113!2.38e-16!27;UBERON:0003918!2.38e-16!27;UBERON:0005095!2.38e-16!27;UBERON:0007687!2.38e-16!27;UBERON:0006555!9.37e-16!17;UBERON:0005103!9.37e-16!17;UBERON:0000083!9.37e-16!17;UBERON:0009201!9.37e-16!17;UBERON:0004819!9.37e-16!17;UBERON:0006553!9.37e-16!17;UBERON:0003074!9.37e-16!17;UBERON:0003060!9.37e-16!17;UBERON:0003887!7.11e-15!21;UBERON:0003886!7.38e-15!63;UBERON:0004211!9.67e-15!16;UBERON:0001285!9.67e-15!16;UBERON:0007684!9.67e-15!16;UBERON:0003220!9.67e-15!16;UBERON:0004208!9.67e-15!16;UBERON:0004876!1.47e-14!20;UBERON:0000058!1.78e-14!26;UBERON:0006554!2.43e-13!44;UBERON:0009773!2.49e-13!12;UBERON:0001231!2.49e-13!12;UBERON:0004810!2.49e-13!12;UBERON:0001008!7.84e-13!45;UBERON:0002553!3.76e-12!70;UBERON:0002417!3.98e-12!61;UBERON:0000916!3.98e-12!61;UBERON:0005177!5.49e-12!107;UBERON:0001225!1.34e-11!13;UBERON:0008987!1.34e-11!13;UBERON:0000464!6.66e-11!104;UBERON:0001851!5.74e-10!16;UBERON:0003064!5.14e-09!37;UBERON:0009569!5.38e-09!113;UBERON:0005172!1.27e-08!55;UBERON:0005173!1.27e-08!55;UBERON:0000466!2.16e-08!126;UBERON:0001473!3.46e-08!8;UBERON:0004536!3.46e-08!8;UBERON:0006558!3.46e-08!8;UBERON:0000353!5.73e-08!17;UBERON:0005174!5.56e-07!5;UBERON:0001137!5.56e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.01e-22;15!UBERON:0004819;1.01e-22;15!UBERON:0001285;1.01e-22;15!UBERON:0007684;1.01e-22;15!UBERON:0000489;3.00e-22;29!UBERON:0004211;7.79e-20;10!UBERON:0009773;7.79e-20;10!UBERON:0001231;7.79e-20;10!UBERON:0004810;7.79e-20;10!UBERON:0002113;5.39e-18;24!UBERON:0011143;5.39e-18;24!UBERON:0001225;4.06e-16;12!UBERON:0008987;4.06e-16;12!UBERON:0006554;1.10e-13;30!UBERON:0001008;1.10e-13;30!UBERON:0001851;1.61e-12;15!UBERON:0000353;1.61e-12;15!UBERON:0011135;7.14e-12;5!UBERON:0002216;7.14e-12;5!UBERON:0011134;7.14e-12;5!UBERON:0002209;7.14e-12;5!UBERON:0002213;7.14e-12;5!UBERON:0007844;7.14e-12;5!UBERON:0011138;7.14e-12;5!UBERON:0001130;7.14e-12;5!UBERON:0001066;7.14e-12;5!UBERON:0001468;7.14e-12;5!UBERON:0004905;3.30e-10;8!UBERON:0000982;3.30e-10;8!UBERON:0004770;3.30e-10;8!UBERON:0002240;1.59e-09;3!UBERON:0005174;1.59e-09;3!UBERON:0001137;1.59e-09;3!UBERON:0000074;4.28e-09;7!UBERON:0001229;4.28e-09;7!UBERON:0006947;7.15e-09;3!UBERON:0004054;7.15e-09;3!UBERON:0006853;1.37e-08;3!UBERON:0007685;1.37e-08;3!UBERON:0004134;1.37e-08;3!UBERON:0002242;6.09e-08;3!UBERON:0002417;8.23e-08;58!UBERON:0000916;8.23e-08;58!UBERON:0005172;1.73e-07;52!UBERON:0005173;1.73e-07;52!UBERON:0001473;2.34e-07;8!UBERON:0004536;2.34e-07;8!UBERON:0006558;2.34e-07;8!UBERON:0005904;9.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,3.62e-26,31;UBERON:0006555,9.81e-25,16;UBERON:0004819,9.81e-25,16;UBERON:0004211,1.41e-22,15;UBERON:0009773,1.41e-22,15;UBERON:0001231,1.41e-22,15;UBERON:0001285,1.41e-22,15;UBERON:0007684,1.41e-22,15;UBERON:0004208,1.41e-22,15;UBERON:0002113,7.58e-22,26;UBERON:0003918,7.58e-22,26;UBERON:0011143,7.58e-22,26;UBERON:0005095,7.58e-22,26;UBERON:0007687,7.58e-22,26;UBERON:0004810,1.02e-19,10;UBERON:0002417,2.04e-16,60;UBERON:0000916,2.04e-16,60;UBERON:0001225,5.39e-16,12;UBERON:0008987,5.39e-16,12;UBERON:0000080,2.18e-13,9;UBERON:0002120,2.18e-13,9;UBERON:0004875,2.18e-13,9;UBERON:0005721,2.18e-13,9;UBERON:0005754,2.18e-13,9;UBERON:0007297,2.18e-13,9;UBERON:0005172,1.57e-12,54;UBERON:0005173,1.57e-12,54;UBERON:0001851,2.01e-12,15;UBERON:0000353,2.01e-12,15;UBERON:0011135,8.09e-12,5;UBERON:0002216,8.09e-12,5;UBERON:0011134,8.09e-12,5;UBERON:0002209,8.09e-12,5;UBERON:0002213,8.09e-12,5;UBERON:0005856,8.09e-12,5;UBERON:0005866,8.09e-12,5;UBERON:0005863,8.09e-12,5;UBERON:0007844,8.09e-12,5;UBERON:0011138,8.09e-12,5;UBERON:0001130,8.09e-12,5;UBERON:0001066,8.09e-12,5;UBERON:0001468,8.09e-12,5;UBERON:0005103,4.28e-11,8;UBERON:0000083,4.28e-11,8;UBERON:0009201,4.28e-11,8;UBERON:0006553,4.28e-11,8;UBERON:0003074,4.28e-11,8;UBERON:0003060,4.28e-11,8;UBERON:0004876,9.56e-11,11;UBERON:0004905,2.88e-10,8;UBERON:0000982,2.88e-10,8;UBERON:0004770,2.88e-10,8;UBERON:0006554,3.12e-10,47;UBERON:0001008,6.15e-10,48;UBERON:0003887,9.35e-10,12;UBERON:0000058,9.74e-10,19;UBERON:0002240,1.51e-09,3;UBERON:0005174,1.51e-09,3;UBERON:0001137,1.51e-09,3;UBERON:0003103,3.65e-09,68;UBERON:0010532,4.86e-09,7;UBERON:0000074,4.86e-09,7;UBERON:0001229,4.86e-09,7;UBERON:0001230,4.86e-09,7;UBERON:0003220,4.86e-09,7;UBERON:0005749,4.86e-09,7;UBERON:0004199,4.86e-09,7;UBERON:0004209,4.86e-09,7;UBERON:0004198,4.86e-09,7;UBERON:0006947,6.63e-09,3;UBERON:0004054,6.63e-09,3;UBERON:0009569,9.94e-09,112;UBERON:0005177,1.24e-08,101;UBERON:0006853,1.65e-08,3;UBERON:0007685,1.65e-08,3;UBERON:0004134,1.65e-08,3;UBERON:0003886,5.89e-08,54;UBERON:0002242,7.63e-08,3;UBERON:0003068,7.63e-08,3;UBERON:0002328,7.63e-08,3;UBERON:0004880,7.63e-08,3;UBERON:0001473,1.96e-07,8;UBERON:0004536,1.96e-07,8;UBERON:0006558,1.96e-07,8;UBERON:0005904,9.41e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,1.0007329835313,0.893922188854576,0,0,1.26343974685366,0.261185628199839,0.737201809504527,0,0,0,1.36142988256051,1.32558950291166,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29208379584664,0.71153252537342,1.33888245105868,1.20848795132744,6.0821768457481,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.587172493218824,0.809364721840658,0.421352420106746,0,0,0,0,0,4.55080680969013,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0126579934476,0.974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,3.00102312635806,1.35632511849868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,1.66580894032411,1.02341449813341,2.2519548960105,0,0.771048469013278,0,1.39616165223476,0,0.348631135379878,0,0,0,0,0,0,3.15839729035188,0.770153371044148,6.27479815341484,5.84556898613043,1.26661954671451,2.27466768141793,3.2317804002538,0.647747748306418,3.08454505380579,1.35473218771926,3.01013864312912,3.05851527654046,3.3243040357149,2.23874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,19.6053941296425,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0.409074730008619,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.784250137270958,0.335643173951685,0.569261198172555,0,0.421996129056054,0,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0.617819694732514,1.04421949505455,0.067401132980677,0,0,0,0,4.12726645207958,4.73501283419269,0,0,0,0.150323419414493,0,0,0.992975867626496,0.313932918407225,1.19472429772959,4.55375273647668,0,0,0,0,2.62090002363045,6.53546923392143,0,0,0,0,0,0,1.37041924646751,0.19871461170299,0,3.32437350649165,0.240476460754601,0,0,0.864542502924636,8.36117152011184,3.26030495937733,0.14405479798815,0.621262677827163,0.235694034616795,17.5316425834962,15.062809868976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0,0,0,1.57483970423598,0,0,0,0,0,0,0,0,0,0,0.945668487590378,1.83591058472493,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0,1.92498849118289,0,0,0,0.570930667089935,0,0,1.1593682288866,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,1.06336685823198,0,0.450772826991655,0.761610424337591,0.813741466409323,0,0,0,0,0,1.03018711554838,0.673498977531838,0,0.192619830407303,0,0.260994291965212,0,0.926089897295336,0.244736704506468,0,0,0.219284049578707,2.29695889729645,0,0,0,0,0,0,0,0,0,2.29326894192489,0,3.80361822045529,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,1.91317428091515,0.247871528518004,2.79322458986622,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,2.7614397042404,0.198916222116275,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0.156986185701028,0,4.76462677633441,0,0,3.8220135030964,0,0,7.55569264892814,2.26015753993353,0,0,0,0,0,2.01164401241961,1.02256085710989,5.08064460229115,0,4.6530957849648,4.77769469488717,0,0.294450700845729,0,0,0,0,0,2.57333409808316,0.596852325484105,0.356760272332706,0.22589216407792,0,7.85006786546702,0,0.437119121007915,2.82190377816914,0,8.72003224276016,17.86407050746,5.94092800654172,11.4117046447518,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0.0802413666891683,1.46067277649303,0,0,1.89325874631822,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,1.07185652062471,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0.244209805832924,0.213454691755431,0,0.17965040421317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| |||
|short_description=p5@HOXB8 | |||
}} |
Latest revision as of 07:34, 25 September 2015
Short description: | p5@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXB8_5end |
Coexpression cluster: | C3646_spinal_alveolar_glioblastoma_somatostatinoma_Endothelial_rhabdomyosarcoma_nonsmall |
Association with transcript: | -17bp_to_NM_024016, uc002inw.2_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | P17481Q8N8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.31e-23 | 17 |
kidney epithelial cell | 3.31e-23 | 17 |
epithelial cell of nephron | 1.41e-22 | 15 |
kidney tubule cell | 1.02e-19 | 10 |
nephron tubule epithelial cell | 1.02e-19 | 10 |
kidney cortical cell | 5.39e-16 | 12 |
renal cortical epithelial cell | 5.39e-16 | 12 |
glomerular cell | 4.86e-09 | 7 |
kidney corpuscule cell | 4.86e-09 | 7 |
brush border epithelial cell | 1.65e-08 | 3 |
kidney cortex tubule cell | 1.65e-08 | 3 |
epithelial cell of proximal tubule | 1.65e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 7.63e-08 | 3 |
omentum preadipocyte | 9.73e-08 | 3 |