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FFCP PHASE1:Mm9::chr3:68376386..68376397,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:68376386..68376397,+
|DHSsupport=NA
|short_description=p4@Iqcj-schip1,p5@Schip1
|DPIdataset=NA
|description=CAGE_peak_4_at_Iqcj-schip1_5end,CAGE_peak_5_at_Schip1_5end
|association_with_transcript=-85bp_to_ENSMUST00000166910_5end
|EntrezGene=100505386,30953
|EntrezGene=100505386,30953
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q8E6
|UniProt=E9Q8E6
|association_with_transcript=-85bp_to_ENSMUST00000166910_5end
|cluster_id=chr3:68376386..68376397,+
|description=CAGE_peak_4_at_Iqcj-schip1_5end,CAGE_peak_5_at_Schip1_5end
|id=chr3:68376386..68376397,+
|ontology_enrichment_celltype=CL:0000540!3.24e-15!33;CL:0000047!3.24e-15!33;CL:0000031!3.24e-15!33;CL:0000404!3.24e-15!33;CL:0000221!2.94e-13!44;CL:0000133!2.94e-13!44;CL:0002319!9.00e-13!43;CL:0000393!2.88e-10!39;CL:0000211!2.88e-10!39;CL:0000117!1.11e-09!23;CL:0000337!1.11e-09!23;CL:0000055!1.68e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,8.13e-22,33;CL:0000047,8.13e-22,33;CL:0000031,8.13e-22,33;CL:0000404,8.13e-22,33;CL:0000393,8.59e-17,39;CL:0000211,8.59e-17,39;CL:0000221,5.77e-16,44;CL:0000133,5.77e-16,44;CL:0002319,2.85e-15,43;CL:0000117,1.78e-13,23;CL:0000337,1.78e-13,23;CL:0000107,6.81e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.45e-29!75;UBERON:0001016!1.45e-29!75;UBERON:0001017!5.87e-29!73;UBERON:0005743!5.87e-29!73;UBERON:0004121!4.10e-23!102;UBERON:0000924!4.10e-23!102;UBERON:0006601!4.10e-23!102;UBERON:0002346!3.18e-22!71;UBERON:0003075!3.18e-22!71;UBERON:0007284!3.18e-22!71;UBERON:0000033!1.20e-21!63;UBERON:0001049!3.21e-21!52;UBERON:0005068!3.21e-21!52;UBERON:0006241!3.21e-21!52;UBERON:0007135!3.21e-21!52;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002616!5.09e-20!49;UBERON:0003056!6.82e-18!49;UBERON:0002020!1.97e-17!34;UBERON:0003080!1.90e-16!40;UBERON:0002780!8.00e-16!39;UBERON:0001890!8.00e-16!39;UBERON:0006240!8.00e-16!39;UBERON:0002791!4.03e-15!29;UBERON:0003528!4.03e-15!29;UBERON:0001893!4.03e-15!29;UBERON:0000956!4.98e-11!21;UBERON:0001869!4.98e-11!21;UBERON:0000203!4.98e-11!21;UBERON:0007811!9.93e-10!86;UBERON:0002619!5.33e-09!17;UBERON:0002021!9.77e-09!10;UBERON:0000411!9.77e-09!10;UBERON:0001950!9.77e-09!10;UBERON:0000153!3.12e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-36,73;UBERON:0001016,4.17e-36,75;UBERON:0004121,3.06e-31,95;UBERON:0000924,3.06e-31,95;UBERON:0006601,3.06e-31,95;UBERON:0002346,7.02e-29,64;UBERON:0003075,7.02e-29,64;UBERON:0007284,7.02e-29,64;UBERON:0000073,4.43e-28,54;UBERON:0001049,3.36e-26,52;UBERON:0005068,3.36e-26,52;UBERON:0006241,3.36e-26,52;UBERON:0007135,3.36e-26,52;UBERON:0010371,8.34e-26,73;UBERON:0002020,1.95e-24,34;UBERON:0000955,1.01e-22,47;UBERON:0006238,1.01e-22,47;UBERON:0002616,9.43e-22,46;UBERON:0003528,6.09e-21,29;UBERON:0002791,6.09e-21,29;UBERON:0001893,6.09e-21,29;UBERON:0003056,1.60e-19,49;UBERON:0003080,1.65e-19,40;UBERON:0002780,1.29e-18,39;UBERON:0001890,1.29e-18,39;UBERON:0006240,1.29e-18,39;UBERON:0010314,7.74e-17,92;UBERON:0000956,8.75e-15,21;UBERON:0001869,8.75e-15,21;UBERON:0000203,8.75e-15,21;UBERON:0002021,2.08e-12,10;UBERON:0000411,2.08e-12,10;UBERON:0001950,2.08e-12,10;UBERON:0002619,9.62e-12,17;UBERON:0002410,6.81e-09,9;UBERON:0000010,4.29e-08,11;UBERON:0002420,2.47e-07,8;UBERON:0007245,2.47e-07,8;UBERON:0010009,2.47e-07,8;UBERON:0010011,2.47e-07,8;UBERON:0000454,2.47e-07,8;UBERON:0003076,3.28e-07,12;UBERON:0003057,3.28e-07,12
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,2.90330914463737,2.97013064329719,3.99617426567626,1.99955689082663,2.42955395046775,4.16468717330844,2.39613677545591,0,5.50579404996943,5.74593021383345,7.0659005297872,1.97829431595291,1.73826522844578,2.6045668527838,6.97957497503452,9.00420176050688,6.26472815884921,4.71405736757868,4.41352210477219,3.72798891650601,0.984440513331393,1.20914496170857,0,0,0,0,0,0,0.842666520790511,0,0,0,4.22530259330042,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,0,0.304465478312141,0,0.452167921657868,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,13.7606974595427,10.6817820474862,0,0,0,0,6.89036941262184,5.49000723382352,6.15706325353036,15.4703644971126,11.5071955798649,5.194701113989,9.73447578406546,0.101839363850316,0,0,1.05220927943237,0.910843100738926,0,0.720248519221397,0.90422890701429,1.29269348387523,2.69038812598185,2.52994656311268,4.65666067330228,0.646703978798527,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0,14.5100064509248,5.35103984372279,0,0,0,1.16118335930219,0.902072229254653,0.403367049246685,0.22237804384487,0.190225626112559,0,1.15289268306808,0.754005626400808,0.198956472041151,0,0,0,0.796565093017469,0.948339504765408,1.02823661348756,3.38123207019241,1.01825663922657,0.775809948670503,2.03393877681924,0.885311519739602,0.442830443938806,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0.568474235311454,0.162964976442026,0,0.704070744865506,0.670025029767263,0.238043640886014,0.195133647857799,0.788175720530955,0.44292937929755,0.797273843287435,0.81931657357869,0.518054945597687,0.723245292907558,0,0,0,0,6.42202359951168,7.73597131508541,0,0.504941854408746,3.78609863299508,5.0757036758563,7.10897212518236,5.01834475700359,6.68396022247182,5.66153061577665,6.47697122679831,4.9683495844923,8.30104333687699,9.63963949265421,0,0,0.162886959353576,0.164970122972535,0,1.21390318077491,1.51161778482376,1.69744571780308,0.590603785761546,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,4.76615448055303,0.900305470156551,0.388076051348264,0,0.354680467284547,0.535106452806212,0.987294123612726,1.522324745573,2.81606049676452,0,0.220528398054962,0,0,0.120625849856312,0,0,0.291480836629851,5.56275906031529,0,0.82554747185289,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.632671987162271,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.578574190077352,0,0.129614973291793,0,2.25477175473676,1.94371509857172,0.496375471371293,1.36115831840833,1.03327858782185,0.675824501963113,1.17357238645754,2.21347454234715,4.19437377702843,1.93267296660805,1.15212002503146,0,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,19.7939851698086,21.7700295106971,17.1853182343688,19.8673930733486,15.107877947794,20.2506750069542,20.7147753483141,14.9536994964788,13.4617681055473,0.726511433089237,1.99512436700516,0.512200817262403,0.729320151204882,0.628839487883947,0.551530525350042,2.22246727801615,1.03017528619447,1.60459604795908,0.505394423527595,1.01391719956096,1.50901073108861,1.03005658216871,0.384150914429216,1.09127391015665,0.476293691283074,0.347652977834566,1.54327376370964,0.412085900803307,1.76638704161277,0.685738504770831,1.4198064492747,0.715308569841963,0.872078499793971,0.564656282491984,1.09998990259179,1.64635175585495,0.263069711437843,1.08643291076689,0,0.593175090620871,0.689531376628944,0.818462086339379,0.464810523557898,0.385813221962283,2.24829520144151,0.233931608445408,1.07435527024149,0.57386499620653,0.220591419119515,0.927471342481686
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,2.90330914463737,2.97013064329719,3.99617426567626,1.99955689082663,2.42955395046775,4.16468717330844,2.39613677545591,0,5.50579404996943,5.74593021383345,7.0659005297872,1.97829431595291,1.73826522844578,2.6045668527838,6.97957497503452,9.00420176050688,6.26472815884921,4.71405736757868,4.41352210477219,3.72798891650601,0.984440513331393,1.20914496170857,0,0,0,0,0,0,0.842666520790511,0,0,0,4.22530259330042,0,0,0,0,0,0,0.91347103775248,0,0.742210695324124,0,0.304465478312141,0,0.452167921657868,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,13.7606974595427,10.6817820474862,0,0,0,0,6.89036941262184,5.49000723382352,6.15706325353036,15.4703644971126,11.5071955798649,5.194701113989,9.73447578406546,0.101839363850316,0,0,1.05220927943237,0.910843100738926,0,0.720248519221397,0.90422890701429,1.29269348387523,2.69038812598185,2.52994656311268,4.65666067330228,0.646703978798527,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0,14.5100064509248,5.35103984372279,0,0,0,1.16118335930219,0.902072229254653,0.403367049246685,0.22237804384487,0.190225626112559,0,1.15289268306808,0.754005626400808,0.198956472041151,0,0,0,0.796565093017469,0.948339504765408,1.02823661348756,3.38123207019241,1.01825663922657,0.775809948670503,2.03393877681924,0.885311519739602,0.442830443938806,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0.568474235311454,0.162964976442026,0,0.704070744865506,0.670025029767263,0.238043640886014,0.195133647857799,0.788175720530955,0.44292937929755,0.797273843287435,0.81931657357869,0.518054945597687,0.723245292907558,0,0,0,0,6.42202359951168,7.73597131508541,0,0.504941854408746,3.78609863299508,5.0757036758563,7.10897212518236,5.01834475700359,6.68396022247182,5.66153061577665,6.47697122679831,4.9683495844923,8.30104333687699,9.63963949265421,0,0,0.162886959353576,0.164970122972535,0,1.21390318077491,1.51161778482376,1.69744571780308,0.590603785761546,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,4.76615448055303,0.900305470156551,0.388076051348264,0,0.354680467284547,0.535106452806212,0.987294123612726,1.522324745573,2.81606049676452,0,0.220528398054962,0,0,0.120625849856312,0,0,0.291480836629851,5.56275906031529,0,0.82554747185289,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.632671987162271,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.578574190077352,0,0.129614973291793,0,2.25477175473676,1.94371509857172,0.496375471371293,1.36115831840833,1.03327858782185,0.675824501963113,1.17357238645754,2.21347454234715,4.19437377702843,1.93267296660805,1.15212002503146,0,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,19.7939851698086,21.7700295106971,17.1853182343688,19.8673930733486,15.107877947794,20.2506750069542,20.7147753483141,14.9536994964788,13.4617681055473,0.726511433089237,1.99512436700516,0.512200817262403,0.729320151204882,0.628839487883947,0.551530525350042,2.22246727801615,1.03017528619447,1.60459604795908,0.505394423527595,1.01391719956096,1.50901073108861,1.03005658216871,0.384150914429216,1.09127391015665,0.476293691283074,0.347652977834566,1.54327376370964,0.412085900803307,1.76638704161277,0.685738504770831,1.4198064492747,0.715308569841963,0.872078499793971,0.564656282491984,1.09998990259179,1.64635175585495,0.263069711437843,1.08643291076689,0,0.593175090620871,0.689531376628944,0.818462086339379,0.464810523557898,0.385813221962283,2.24829520144151,0.233931608445408,1.07435527024149,0.57386499620653,0.220591419119515,0.927471342481686
|short_description=p4@Iqcj-schip1,p5@Schip1
}}
}}

Latest revision as of 16:12, 25 September 2015

Short description:p4@Iqcj-schip1, p5@Schip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Iqcj-schip1_5end, CAGE_peak_5_at_Schip1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -85bp_to_ENSMUST00000166910_5end
EntrezGene:100505386,30953
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Iqcj-schip1p5@Schip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.51
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.43e-3673
nervous system4.17e-3675
ectoderm-derived structure3.06e-3195
ectoderm3.06e-3195
presumptive ectoderm3.06e-3195
neurectoderm7.02e-2964
neural plate7.02e-2964
presumptive neural plate7.02e-2964
regional part of nervous system4.43e-2854
neural tube3.36e-2652
neural rod3.36e-2652
future spinal cord3.36e-2652
neural keel3.36e-2652
ecto-epithelium8.34e-2673
gray matter1.95e-2434
brain1.01e-2247
future brain1.01e-2247
regional part of brain9.43e-2246
brain grey matter6.09e-2129
regional part of telencephalon6.09e-2129
telencephalon6.09e-2129
pre-chordal neural plate1.60e-1949
anterior neural tube1.65e-1940
regional part of forebrain1.29e-1839
forebrain1.29e-1839
future forebrain1.29e-1839
structure with developmental contribution from neural crest7.74e-1792
cerebral cortex8.75e-1521
cerebral hemisphere8.75e-1521
pallium8.75e-1521
occipital lobe2.08e-1210
visual cortex2.08e-1210
neocortex2.08e-1210
regional part of cerebral cortex9.62e-1217
autonomic nervous system6.81e-099
peripheral nervous system4.29e-0811
basal ganglion2.47e-078
nuclear complex of neuraxis2.47e-078
aggregate regional part of brain2.47e-078
collection of basal ganglia2.47e-078
cerebral subcortex2.47e-078
posterior neural tube3.28e-0712
chordal neural plate3.28e-0712
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