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FFCP PHASE1:Mm9::chr3:69120795..69120859,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:69120795..69120859,+
|DHSsupport=NA
|short_description=p1@Ppm1l
|DPIdataset=NA
|description=CAGE_peak_1_at_Ppm1l_5end
|association_with_transcript=0bp_to_NM_178726,uc008pmg.1_5end
|EntrezGene=242083
|EntrezGene=242083
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BHN0
|UniProt=Q8BHN0
|association_with_transcript=0bp_to_NM_178726,uc008pmg.1_5end
|cluster_id=chr3:69120795..69120859,+
|description=CAGE_peak_1_at_Ppm1l_5end
|id=chr3:69120795..69120859,+
|ontology_enrichment_celltype=CL:0000540!6.41e-14!33;CL:0000047!6.41e-14!33;CL:0000031!6.41e-14!33;CL:0000404!6.41e-14!33;CL:0000117!3.84e-13!23;CL:0000337!3.84e-13!23;CL:0000221!1.84e-11!44;CL:0000133!1.84e-11!44;CL:0002319!4.31e-11!43;CL:0000393!2.88e-10!39;CL:0000211!2.88e-10!39;CL:0000055!6.92e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.40e-14,33;CL:0000047,6.40e-14,33;CL:0000031,6.40e-14,33;CL:0000404,6.40e-14,33;CL:0000117,3.84e-13,23;CL:0000337,3.84e-13,23;CL:0000221,1.83e-11,44;CL:0000133,1.83e-11,44;CL:0002319,4.30e-11,43;CL:0000393,2.94e-10,39;CL:0000211,2.94e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.92e-27!75;UBERON:0001016!1.92e-27!75;UBERON:0001017!1.48e-26!73;UBERON:0005743!1.48e-26!73;UBERON:0001049!3.43e-23!52;UBERON:0005068!3.43e-23!52;UBERON:0006241!3.43e-23!52;UBERON:0007135!3.43e-23!52;UBERON:0000033!1.43e-22!63;UBERON:0000955!1.47e-22!50;UBERON:0006238!1.47e-22!50;UBERON:0002616!6.90e-22!49;UBERON:0004121!9.62e-21!102;UBERON:0000924!9.62e-21!102;UBERON:0006601!9.62e-21!102;UBERON:0002346!1.74e-19!71;UBERON:0003075!1.74e-19!71;UBERON:0007284!1.74e-19!71;UBERON:0003080!1.83e-18!40;UBERON:0002780!5.64e-18!39;UBERON:0001890!5.64e-18!39;UBERON:0006240!5.64e-18!39;UBERON:0002020!7.02e-18!34;UBERON:0003056!2.80e-17!49;UBERON:0002791!4.11e-15!29;UBERON:0003528!4.11e-15!29;UBERON:0001893!4.11e-15!29;UBERON:0004111!4.87e-14!122;UBERON:0007811!1.82e-13!86;UBERON:0000025!1.96e-13!114;UBERON:0000153!1.26e-12!94;UBERON:0000956!4.59e-11!21;UBERON:0001869!4.59e-11!21;UBERON:0000203!4.59e-11!21;UBERON:0000477!4.08e-09!154;UBERON:0002619!8.44e-09!17;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10;UBERON:0000479!9.95e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-27,75;UBERON:0001017,1.48e-26,73;UBERON:0000073,7.10e-25,54;UBERON:0001049,3.42e-23,52;UBERON:0005068,3.42e-23,52;UBERON:0006241,3.42e-23,52;UBERON:0007135,3.42e-23,52;UBERON:0004121,4.34e-23,95;UBERON:0000924,4.34e-23,95;UBERON:0006601,4.34e-23,95;UBERON:0002346,1.24e-22,64;UBERON:0003075,1.24e-22,64;UBERON:0007284,1.24e-22,64;UBERON:0000955,1.65e-20,47;UBERON:0006238,1.65e-20,47;UBERON:0002616,7.51e-20,46;UBERON:0010314,2.60e-19,92;UBERON:0003080,1.83e-18,40;UBERON:0002780,5.62e-18,39;UBERON:0001890,5.62e-18,39;UBERON:0006240,5.62e-18,39;UBERON:0002020,7.00e-18,34;UBERON:0010371,9.20e-18,73;UBERON:0003056,2.79e-17,49;UBERON:0003528,4.11e-15,29;UBERON:0002791,4.11e-15,29;UBERON:0001893,4.11e-15,29;UBERON:0004111,4.95e-14,122;UBERON:0000025,1.99e-13,114;UBERON:0000956,4.58e-11,21;UBERON:0001869,4.58e-11,21;UBERON:0000203,4.58e-11,21;UBERON:0002619,8.43e-09,17;UBERON:0002021,8.34e-08,10;UBERON:0000411,8.34e-08,10;UBERON:0001950,8.34e-08,10;UBERON:0011216,1.56e-07,194
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694427098,16.3653842336165,16.2288684030098,11.1468877030942,21.7468759580424,2.25477175473676,5.08356256549528,6.28742263736971,6.02798683866548,6.32883135040882,5.74450826668646,7.86293498926552,12.6298253298632,15.5191829750052,3.62376181239009,6.62469014393091,4.74016680942267,10.9471616256689,11.6063381596255,9.35429925440124,6.44496104402933,6.75516606256301,7.69250876927801,7.53216588590344,5.25025539730368,6.62999217898499,5.14213544197887,5.9449307251249,3.46362629905186,5.84384510907845,23.3532295123668,2.88581739386284,2.87084341150322,2.01461539636894,11.7845652359636,10.322536149815,14.8352815656485,18.0069438426415,4.51414893631827,33.3203587144069,29.9211403729665,38.956894913879,53.6181928912305,32.8839609489908,47.5898155355511,45.9015300157628,48.6346899482158,45.7673833074047,52.2937914869338,5.60451676954554,18.3551441764474,12.8050204315601,11.1829089851415,3.98265008993166,4.59608771125035,10.6678429344775,6.18105171716683,11.8740107548972,8.33900798820532,10.1391719956096,10.3744487762342,10.3005658216871,12.6129550237592,12.1188839496344,10.4784612082276,15.6443840025555,12.1532808892134,11.5384052224926,10.5983222496766,10.9718160763333,10.6485483695602,13.5908628269973,8.43009216467505,11.1990162694243,10.9152844180263,11.1586063452391,6.83981249738391,12.3581743599734,7.85599180320834,11.8635018124174,13.1996006383255,11.0492381655816,10.5357052006457,9.45242393807593,13.2399606307111,13.8019648982791,13.9666185131394,10.1382815996487,12.5737108898124,15.0714093153274
|phase1_expression=8.80818659076367,3.83872948403297,2.27499619694768,3.93203474698879,4.00716583957078,2.35030980676646,2.10251376535973,19.7558684865612,10.6999428835267,15.9163877898956,1.19852577757853,1.19658238493005,2.22560948910567,6.99363219351979,16.9885978525988,20.6524772737622,38.4759032970481,2.05050407482854,2.33094537129756,3.81950686618227,13.0966666832647,4.86525660884338,4.4403964153619,2.23989391910769,3.89995777814189,2.29692785646008,1.29228598847722,1.939241094173,0.760093677825496,0.756090389279792,0.443461021310609,8.25539875497521,8.61090702618398,0,3.17736781726402,3.49092755252834,3.67504841272264,0.418531630736908,0,0,1.17646297606203,0,0.485510353031154,6.54663453473002,8.41428529121971,22.2091570115635,9.38869613217647,7.63088047331563,7.68901639570651,9.52706505463989,6.15940255151595,4.31257693094915,2.68452169692378,7.25362142011344,6.04968838456435,0.514518872071894,1.43266719969378,2.57836046138721,22.0524942336962,33.3264316941381,21.5502677192101,3.38844532069132,8.89294796111139,0,0.988866362566974,1.4209602298922,6.89080254192331,8.83702102239575,31.2105733048518,30.3763361246304,32.3900440481128,29.4220513935918,22.5285911770646,21.313399063402,22.4278402182673,25.7381260250806,39.6417171597799,43.4136949489638,35.329502648936,28.0917792865313,27.3548054371205,28.129322010065,31.2684958881547,29.826418331679,28.5732723342635,33.5876587439981,31.4641414566017,30.5695091153493,18.4014649799637,19.7997487479778,7.24661221754194,2.58127163094416,7.47968467078526,13.4925797909454,11.0461990966104,11.6486990645307,10.9546647702766,9.54409806437123,7.01422212427746,9.18682893726885,20.281452447842,14.115912515575,7.64415719119937,7.11066703153331,3.68034769719064,4.30711771307668,4.54972000513305,7.87868770061514,1.55362730188303,8.75808620482466,6.24547176358089,7.00270600117925,6.22661842591358,7.08396410597326,9.64227398512779,6.91166252313215,6.92145909656247,4.77177877835708,8.84610551949874,21.0296904931632,18.1090045137523,12.1218813283806,1.86391761218122,39.2326267995473,49.4294228079754,6.13096932500619,1.67741174308288,0,1.14363204365758,24.4158742229861,22.8750301409313,26.2617595915887,42.9346070874923,47.8187905207718,29.5059023274575,32.4482526135515,5.90668310331835,8.33526703087623,3.0326731012041,20.8337437327609,8.06746746368763,6.66716102857071,7.02242306240862,9.0422890701429,11.4301318574231,11.2740073850668,13.118241438362,19.9201595469042,8.40715172438085,14.3720620927543,12.4925298156404,10.5213951565236,8.61946472599353,10.7958171621872,6.37924622864625,8.35943920637671,0.702213187313235,0.51469581422943,0.284163499395593,8.07790512888457,10.7881987591304,8.10279276574567,9.2330446878232,8.65762619688577,11.8785676923281,12.556833016522,16.0964040839772,13.8950757416932,17.4433440908289,12.148392341853,16.4569683378087,17.5439984910399,16.6858087621198,15.5679445762031,25.8656636733877,23.4622516224768,3.63460661282178,6.08236303326152,10.024547775156,11.147360249301,5.92790322081629,4.03367049246685,4.44756087689741,4.94586627892654,7.59246498471219,5.10566759644434,6.03204501120647,8.95304124185179,7.40863531052657,7.19055526923377,6.91641759599022,8.36393347668342,5.69003702859245,5.9409226557059,7.88954149711563,5.90588850751411,4.84881217919064,8.55657002661886,8.15751328902919,6.4948465111025,6.27994911365499,9.00799296629144,12.1545577105731,10.67808676583,13.7591296579242,11.9176919563972,13.9973483758067,13.2647437863829,11.4581633301639,7.48009957372108,11.1873306474774,8.78596522201861,2.87536413054709,8.18710084870708,9.04909252032226,5.30415643688935,4.84373016509163,9.64887042726734,9.79191907883005,6.44270800019648,6.35563408123901,5.60158783058121,5.86725620721255,6.70025029767263,9.28370199455454,18.1474292507753,6.14777062014145,7.75126413770712,7.49437412690189,8.84861899464985,7.42545422023351,9.25753974921674,1.50791283939272,3.26343410291226,3.93411418415229,3.86311444826625,18.3027672586083,25.4349359905081,11.4754461763673,32.0638077549554,12.304820557234,12.1036010731958,16.1567548299599,14.8160654730582,18.4922899488387,24.9107347094173,10.9298889452221,11.3979784585412,16.602086673754,37.9159153377732,15.329529202493,5.87616492101942,10.5876523579824,26.7251599215507,13.2745138339963,7.04063844849446,5.44182402536552,9.24164890803901,5.90603785761546,7.68587869859819,10.0787034335606,10.9060118843252,9.26893183800275,13.5895805912401,16.8669773719998,14.4389760547462,44.5975883537462,14.9450708045987,13.194585745841,10.7168517515796,15.9606210278046,16.5883000369926,16.9485491220185,14.0053876592716,1.64270195644597,2.96564899209348,2.8668691747145,3.62749756471256,6.62004149453213,7.47880269109133,4.29740438411291,4.26766339337159,8.16146342563582,20.025932617135,12.6444451790411,4.74689796315412,6.48180845793991,20.3437933565066,18.0436380591753,21.0475919350001,3.73952545986482,1.95932033253121,3.59319931891502,4.77335309007557,6.95939185878498,9.75933442208874,10.0444966964275,11.2907679847813,12.0099410060398,11.4634694427098,16.3653842336165,16.2288684030098,11.1468877030942,21.7468759580424,2.25477175473676,5.08356256549528,6.28742263736971,6.02798683866548,6.32883135040882,5.74450826668646,7.86293498926552,12.6298253298632,15.5191829750052,3.62376181239009,6.62469014393091,4.74016680942267,10.9471616256689,11.6063381596255,9.35429925440124,6.44496104402933,6.75516606256301,7.69250876927801,7.53216588590344,5.25025539730368,6.62999217898499,5.14213544197887,5.9449307251249,3.46362629905186,5.84384510907845,23.3532295123668,2.88581739386284,2.87084341150322,2.01461539636894,11.7845652359636,10.322536149815,14.8352815656485,18.0069438426415,4.51414893631827,33.3203587144069,29.9211403729665,38.956894913879,53.6181928912305,32.8839609489908,47.5898155355511,45.9015300157628,48.6346899482158,45.7673833074047,52.2937914869338,5.60451676954554,18.3551441764474,12.8050204315601,11.1829089851415,3.98265008993166,4.59608771125035,10.6678429344775,6.18105171716683,11.8740107548972,8.33900798820532,10.1391719956096,10.3744487762342,10.3005658216871,12.6129550237592,12.1188839496344,10.4784612082276,15.6443840025555,12.1532808892134,11.5384052224926,10.5983222496766,10.9718160763333,10.6485483695602,13.5908628269973,8.43009216467505,11.1990162694243,10.9152844180263,11.1586063452391,6.83981249738391,12.3581743599734,7.85599180320834,11.8635018124174,13.1996006383255,11.0492381655816,10.5357052006457,9.45242393807593,13.2399606307111,13.8019648982791,13.9666185131394,10.1382815996487,12.5737108898124,15.0714093153274
|short_description=p1@Ppm1l
}}
}}

Latest revision as of 16:34, 25 September 2015

Short description:p1@Ppm1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ppm1l_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_178726, uc008pmg.1_5end
EntrezGene:Ppm1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ppm1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.65
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A538.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.21
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C322.05
Mouse Granule cells, donor2.CNhs12357.11731-123E333.33
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.33
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.35
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.27
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.57
Mouse Schwann, donor1.CNhs12507.11728-123D918.40
Mouse Schwann, donor2.CNhs12573.11746-123F919.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D78.76
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C19.64
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F521.03
bone (os femoris), neonate N16.CNhs11225.1525-43A618.11
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B239.23
cerebellum, neonate N30.CNhs11135.1395-42I249.43
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A424.42
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F126.26
cortex, adult.CNhs10473.12-14D542.93
cortex, neonate N30.CNhs11107.1392-42F247.82
diencephalon, adult.CNhs10482.20-12F229.51
diencephalon, neonate N30.CNhs11201.1388-42B232.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.34
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G420.83
eyeball, embryo E12.CNhs11016.345-16C68.07
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D49.04
eyeball, neonate N00.CNhs11207.633-15C611.43
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A219.92
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H214.37
forelimb, embryo E13.CNhs10589.384-1E212.49
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I68.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E98.08
heart, embryo E12.CNhs11015.353-12F510.79
heart, embryo E13.CNhs11013.376-3I98.10
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C611.88
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G316.10
heart, neonate N00.CNhs11213.639-21E313.90
heart, neonate N03.CNhs11221.1349-25I217.44
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G116.46
heart, neonate N20.CNhs11127.821-26I617.54
heart, neonate N25.CNhs11196.1351-25D316.69
heart, neonate N30.CNhs11202.1390-42D215.57
hippocampus, adult.CNhs10478.13-16E825.87
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I510.02
intestine, embryo E13.CNhs11010.381-16D511.15
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G78.56
kidney, neonate N10.CNhs11206.758-6D58.16
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H19.01
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F810.68
liver, embryo E13.CNhs10524.378-3H613.76
liver, embryo E14.CNhs10594.409-16E111.92
liver, embryo E15.CNhs10520.433-16D714.00
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F411.19
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C618.15
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H29.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C218.30
medulla oblongata, neonate N30.CNhs11200.1396-42A325.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I937.92
ovary, adult.CNhs10507.91-2I715.33
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G626.73
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E59.24
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G844.60
pituitary gland, embryo E12.CNhs11018.346-16E614.95
pituitary gland, embryo E13.CNhs11009.370-44C713.19
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B915.96
pituitary gland, embryo E16.CNhs11036.449-43F616.59
pituitary gland, embryo E17.CNhs11039.1265-44F516.95
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H37.48
skin, neonate N06.CNhs11097.693-20I54.30
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C920.03
spleen, adult.CNhs10465.25-2G212.64
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D120.34
spleen, neonate N20.CNhs11112.824-19H118.04
spleen, neonate N25.CNhs11099.1354-25G321.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D410.04
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C612.01
stomach, neonate N03.CNhs11193.1340-24B811.46
stomach, neonate N07.CNhs11210.718-18A916.37
stomach, neonate N25.CNhs11104.1355-25E416.23
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B77.86
testis, neonate N07.CNhs11222.726-26I412.63
testis, neonate N10.CNhs11204.763-44D915.52
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I211.61
thymus, embryo E16.CNhs11002.456-26C59.35
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C45.25
thymus, neonate N07.CNhs11211.713-19D36.63
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A25.94
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G25.84
tongue, adult.CNhs10499.32-1B423.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E411.78
uterus, adult pregnant day19.CNhs10497.590-15F510.32
uterus, adult.CNhs10509.92-27E514.84
vagina, adult.CNhs10502.89-27D518.01
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.96
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D753.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A547.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A748.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A845.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A952.29
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C918.36
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B415.07





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.40e-1433
neuronal stem cell6.40e-1433
neuroblast6.40e-1433
electrically signaling cell6.40e-1433
CNS neuron (sensu Vertebrata)3.84e-1323
neuroblast (sensu Vertebrata)3.84e-1323
ectodermal cell1.83e-1144
neurectodermal cell1.83e-1144
neural cell4.30e-1143
electrically responsive cell2.94e-1039
electrically active cell2.94e-1039

Uber anatomy
Ontology termp-valuen
nervous system1.92e-2775
central nervous system1.48e-2673
regional part of nervous system7.10e-2554
neural tube3.42e-2352
neural rod3.42e-2352
future spinal cord3.42e-2352
neural keel3.42e-2352
ectoderm-derived structure4.34e-2395
ectoderm4.34e-2395
presumptive ectoderm4.34e-2395
neurectoderm1.24e-2264
neural plate1.24e-2264
presumptive neural plate1.24e-2264
brain1.65e-2047
future brain1.65e-2047
regional part of brain7.51e-2046
structure with developmental contribution from neural crest2.60e-1992
anterior neural tube1.83e-1840
regional part of forebrain5.62e-1839
forebrain5.62e-1839
future forebrain5.62e-1839
gray matter7.00e-1834
ecto-epithelium9.20e-1873
pre-chordal neural plate2.79e-1749
brain grey matter4.11e-1529
regional part of telencephalon4.11e-1529
telencephalon4.11e-1529
anatomical conduit4.95e-14122
tube1.99e-13114
cerebral cortex4.58e-1121
cerebral hemisphere4.58e-1121
pallium4.58e-1121
regional part of cerebral cortex8.43e-0917
occipital lobe8.34e-0810
visual cortex8.34e-0810
neocortex8.34e-0810
organ system subdivision1.56e-07194
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