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FFCP PHASE1:Mm9::chr16:5885062..5885141,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268859
|EntrezGene=268859
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JJ43
|UniProt=Q9JJ43
|association_with_transcript=176bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end
|association_with_transcript=176bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end
|cluster_id=chr16:5885062..5885141,+
|description=CAGE_peak_5_at_Rbfox1_5end
|description=CAGE_peak_5_at_Rbfox1_5end
|id=chr16:5885062..5885141,+
|id=chr16:5885062..5885141,+
|ontology_enrichment_celltype=CL:0000117!1.96e-12!23;CL:0000337!1.96e-12!23;CL:0000540!1.44e-11!33;CL:0000047!1.44e-11!33;CL:0000031!1.44e-11!33;CL:0000404!1.44e-11!33;CL:0000393!5.43e-08!39;CL:0000211!5.43e-08!39
|ontology_enrichment_celltype=CL:0000117!1.96e-12!23;CL:0000337!1.96e-12!23;CL:0000540!1.44e-11!33;CL:0000047!1.44e-11!33;CL:0000031!1.44e-11!33;CL:0000404!1.44e-11!33;CL:0000393!5.43e-08!39;CL:0000211!5.43e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.46e-18,23;CL:0000337,5.46e-18,23;CL:0000540,2.14e-11,33;CL:0000047,2.14e-11,33;CL:0000031,2.14e-11,33;CL:0000404,2.14e-11,33;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39;CL:0002319,3.12e-07,43;CL:0000221,6.26e-07,44;CL:0000133,6.26e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!2.65e-22!73;UBERON:0005743!2.65e-22!73;UBERON:0001049!3.85e-21!52;UBERON:0005068!3.85e-21!52;UBERON:0006241!3.85e-21!52;UBERON:0007135!3.85e-21!52;UBERON:0000073!5.55e-21!75;UBERON:0001016!5.55e-21!75;UBERON:0000955!2.77e-20!50;UBERON:0006238!2.77e-20!50;UBERON:0000033!4.78e-20!63;UBERON:0002616!1.65e-19!49;UBERON:0002020!8.96e-19!34;UBERON:0004121!2.23e-18!102;UBERON:0000924!2.23e-18!102;UBERON:0006601!2.23e-18!102;UBERON:0003056!3.78e-17!49;UBERON:0003080!2.39e-16!40;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0002780!1.15e-15!39;UBERON:0001890!1.15e-15!39;UBERON:0006240!1.15e-15!39;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0007811!8.80e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!3.33e-09!10;UBERON:0000411!3.33e-09!10;UBERON:0001950!3.33e-09!10;UBERON:0000153!1.12e-07!94
|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!2.65e-22!73;UBERON:0005743!2.65e-22!73;UBERON:0001049!3.85e-21!52;UBERON:0005068!3.85e-21!52;UBERON:0006241!3.85e-21!52;UBERON:0007135!3.85e-21!52;UBERON:0000073!5.55e-21!75;UBERON:0001016!5.55e-21!75;UBERON:0000955!2.77e-20!50;UBERON:0006238!2.77e-20!50;UBERON:0000033!4.78e-20!63;UBERON:0002616!1.65e-19!49;UBERON:0002020!8.96e-19!34;UBERON:0004121!2.23e-18!102;UBERON:0000924!2.23e-18!102;UBERON:0006601!2.23e-18!102;UBERON:0003056!3.78e-17!49;UBERON:0003080!2.39e-16!40;UBERON:0002791!6.31e-16!29;UBERON:0003528!6.31e-16!29;UBERON:0001893!6.31e-16!29;UBERON:0002780!1.15e-15!39;UBERON:0001890!1.15e-15!39;UBERON:0006240!1.15e-15!39;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0007811!8.80e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!3.33e-09!10;UBERON:0000411!3.33e-09!10;UBERON:0001950!3.33e-09!10;UBERON:0000153!1.12e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-29,54;UBERON:0002020,1.85e-28,34;UBERON:0001049,9.64e-28,52;UBERON:0005068,9.64e-28,52;UBERON:0006241,9.64e-28,52;UBERON:0007135,9.64e-28,52;UBERON:0001017,1.28e-25,73;UBERON:0001016,1.64e-24,75;UBERON:0003528,3.96e-24,29;UBERON:0002791,3.96e-24,29;UBERON:0001893,3.96e-24,29;UBERON:0000955,1.41e-23,47;UBERON:0006238,1.41e-23,47;UBERON:0002346,2.87e-23,64;UBERON:0003075,2.87e-23,64;UBERON:0007284,2.87e-23,64;UBERON:0002616,1.77e-22,46;UBERON:0003080,6.44e-20,40;UBERON:0002780,6.14e-19,39;UBERON:0001890,6.14e-19,39;UBERON:0006240,6.14e-19,39;UBERON:0010371,1.19e-18,73;UBERON:0000956,1.70e-18,21;UBERON:0001869,1.70e-18,21;UBERON:0000203,1.70e-18,21;UBERON:0004121,8.38e-18,95;UBERON:0000924,8.38e-18,95;UBERON:0006601,8.38e-18,95;UBERON:0003056,1.67e-16,49;UBERON:0002619,1.87e-14,17;UBERON:0010314,2.16e-13,92;UBERON:0002021,4.16e-13,10;UBERON:0000411,4.16e-13,10;UBERON:0001950,4.16e-13,10;UBERON:0003076,2.65e-08,12;UBERON:0003057,2.65e-08,12;UBERON:0002420,8.96e-07,8;UBERON:0007245,8.96e-07,8;UBERON:0010009,8.96e-07,8;UBERON:0010011,8.96e-07,8;UBERON:0000454,8.96e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,5.07065122804943,0,0,0,0,0.7104801149461,0,0,6.0139975138917,9.18040380655497,6.94072372459561,3.71346279724945,4.41737081903227,2.9397791811589,3.25874601462004,3.67687514644008,5.50579404996943,7.78892762319645,5.83704826373725,3.42904348098504,2.56165402086747,3.64639359389732,1.11673199600552,1.68828783009504,2.75036845998258,6.48182888042069,4.55589378557129,3.54158947068071,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,1.17588707135705,0,0,0,0,0,0,0,0,13.7606974595427,19.6879904404648,0.255457055208591,0,0,0,9.8861822007183,21.9600289352941,10.6806199295935,17.3824320192276,18.9229438424445,17.8697718321222,18.1710214635889,0.203678727700633,0,0,1.05220927943237,0,0.229902104433473,0.180062129805349,0.90422890701429,0.680364991513279,0.384341160854549,0.562210347358373,3.3631438196072,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,20.6084149592845,14.818264182617,0,0,0,0,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.407302655690628,0,0,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,8.18808008937739,9.14251155419185,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,18.6366363524648,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0,7.04616147639937,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.674321731924103,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7195773899168,23.476587061866,34.9466263198032,30.246160092489,21.2375581128899,19.6402413321322,16.8755625057951,12.158672487054,14.5005570874945,16.5683299760582,0.207574695168353,1.19707462020309,1.53660245178721,4.61902762429759,1.46729213839588,1.83843508450014,3.77819437262746,3.91466608753899,4.1719497246936,3.79045817645696,4.05566879824384,3.2066478035633,4.775716880964,4.09760975391163,3.33125719942557,0.952587382566147,2.78122382267653,3.27945674788299,4.12085900803307,2.64958056241915,3.08582327146874,2.12970967391205,5.7224685587357,4.50573891560218,2.82328141245992,2.96151127620868,4.024415403201,2.10455769150274,3.66671107383827,1.12228454331548,3.32178050747688,3.74317033027141,1.22769312950907,3.71848418846318,2.12197272079256,5.49583271463481,4.21076895201735,2.79332370262788,0.765153328275374,0.441182838239031,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,5.07065122804943,0,0,0,0,0.7104801149461,0,0,6.0139975138917,9.18040380655497,6.94072372459561,3.71346279724945,4.41737081903227,2.9397791811589,3.25874601462004,3.67687514644008,5.50579404996943,7.78892762319645,5.83704826373725,3.42904348098504,2.56165402086747,3.64639359389732,1.11673199600552,1.68828783009504,2.75036845998258,6.48182888042069,4.55589378557129,3.54158947068071,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,1.17588707135705,0,0,0,0,0,0,0,0,13.7606974595427,19.6879904404648,0.255457055208591,0,0,0,9.8861822007183,21.9600289352941,10.6806199295935,17.3824320192276,18.9229438424445,17.8697718321222,18.1710214635889,0.203678727700633,0,0,1.05220927943237,0,0.229902104433473,0.180062129805349,0.90422890701429,0.680364991513279,0.384341160854549,0.562210347358373,3.3631438196072,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,20.6084149592845,14.818264182617,0,0,0,0,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.407302655690628,0,0,0,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,8.18808008937739,9.14251155419185,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0,0.395287777946524,18.6366363524648,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0,7.04616147639937,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.674321731924103,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7195773899168,23.476587061866,34.9466263198032,30.246160092489,21.2375581128899,19.6402413321322,16.8755625057951,12.158672487054,14.5005570874945,16.5683299760582,0.207574695168353,1.19707462020309,1.53660245178721,4.61902762429759,1.46729213839588,1.83843508450014,3.77819437262746,3.91466608753899,4.1719497246936,3.79045817645696,4.05566879824384,3.2066478035633,4.775716880964,4.09760975391163,3.33125719942557,0.952587382566147,2.78122382267653,3.27945674788299,4.12085900803307,2.64958056241915,3.08582327146874,2.12970967391205,5.7224685587357,4.50573891560218,2.82328141245992,2.96151127620868,4.024415403201,2.10455769150274,3.66671107383827,1.12228454331548,3.32178050747688,3.74317033027141,1.22769312950907,3.71848418846318,2.12197272079256,5.49583271463481,4.21076895201735,2.79332370262788,0.765153328275374,0.441182838239031,0
|short_description=p5@Rbfox1
|short_description=p5@Rbfox1
}}
}}

Latest revision as of 16:53, 25 September 2015

Short description:p5@Rbfox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rbfox1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 176bp_to_NM_021477, uc007ycb.2, uc007ycc.2, uc012abb.1_5end
EntrezGene:Rbfox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Rbfox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F217.87
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G114.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A39.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.46e-1823
neuroblast (sensu Vertebrata)5.46e-1823
neuron2.14e-1133
neuronal stem cell2.14e-1133
neuroblast2.14e-1133
electrically signaling cell2.14e-1133
electrically responsive cell1.28e-0839
electrically active cell1.28e-0839
neural cell3.12e-0743
ectodermal cell6.26e-0744
neurectodermal cell6.26e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.04e-2954
gray matter1.85e-2834
neural tube9.64e-2852
neural rod9.64e-2852
future spinal cord9.64e-2852
neural keel9.64e-2852
central nervous system1.28e-2573
nervous system1.64e-2475
brain grey matter3.96e-2429
regional part of telencephalon3.96e-2429
telencephalon3.96e-2429
brain1.41e-2347
future brain1.41e-2347
neurectoderm2.87e-2364
neural plate2.87e-2364
presumptive neural plate2.87e-2364
regional part of brain1.77e-2246
anterior neural tube6.44e-2040
regional part of forebrain6.14e-1939
forebrain6.14e-1939
future forebrain6.14e-1939
ecto-epithelium1.19e-1873
cerebral cortex1.70e-1821
cerebral hemisphere1.70e-1821
pallium1.70e-1821
ectoderm-derived structure8.38e-1895
ectoderm8.38e-1895
presumptive ectoderm8.38e-1895
pre-chordal neural plate1.67e-1649
regional part of cerebral cortex1.87e-1417
structure with developmental contribution from neural crest2.16e-1392
occipital lobe4.16e-1310
visual cortex4.16e-1310
neocortex4.16e-1310
posterior neural tube2.65e-0812
chordal neural plate2.65e-0812
basal ganglion8.96e-078
nuclear complex of neuraxis8.96e-078
aggregate regional part of brain8.96e-078
collection of basal ganglia8.96e-078
cerebral subcortex8.96e-078
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