FFCP PHASE1:Mm9::chr16:67621125..67621167,-: Difference between revisions
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{{FFCP|EntrezGene=239857|HGNC=|MCL_coexpression_id=1|UniProt=Q8BLQ9|association_with_transcript=0bp_to_ENSMUST00000114292,ENSMUST00000120898,NM_001145977,NM_178721,uc007zqn.2,uc007zqo.2_5end|description=CAGE_peak_1_at_Cadm2_5end|id=chr16:67621125..67621167,-|ontology_enrichment_celltype=CL:0000221!4.07e-13!44;CL:0000133!4.07e-13!44;CL:0002319!5.55e-13!43;CL:0000540!7.38e-13!33;CL:0000047!7.38e-13!33;CL:0000031!7.38e-13!33;CL:0000404!7.38e-13!33;CL:0000117!1.52e-12!23;CL:0000337!1.52e-12!23;CL:0000393!3.33e-10!39;CL:0000211!3.33e-10!39;CL:0000055!4.60e-10!50|ontology_enrichment_celltype_v019_2=CL:0000221,9.34e-15,44;CL:0000133,9.34e-15,44;CL:0002319,1.32e-14,43;CL:0000540,3.12e-14,33;CL:0000047,3.12e-14,33;CL:0000031,3.12e-14,33;CL:0000404,3.12e-14,33;CL:0000117,7.03e-14,23;CL:0000337,7.03e-14,23;CL:0000393,1.49e-11,39;CL:0000211,1.49e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.08e-30!75;UBERON:0001016!1.08e-30!75;UBERON:0001017!1.09e-30!73;UBERON:0005743!1.09e-30!73;UBERON:0000033!2.95e-28!63;UBERON:0004121!3.97e-28!102;UBERON:0000924!3.97e-28!102;UBERON:0006601!3.97e-28!102;UBERON:0002346!9.95e-26!71;UBERON:0003075!9.95e-26!71;UBERON:0007284!9.95e-26!71;UBERON:0001049!1.75e-25!52;UBERON:0005068!1.75e-25!52;UBERON:0006241!1.75e-25!52;UBERON:0007135!1.75e-25!52;UBERON:0000955!1.62e-24!50;UBERON:0006238!1.62e-24!50;UBERON:0002616!8.65e-24!49;UBERON:0003056!2.27e-23!49;UBERON:0002020!1.46e-19!34;UBERON:0003080!1.79e-19!40;UBERON:0002780!7.30e-19!39;UBERON:0001890!7.30e-19!39;UBERON:0006240!7.30e-19!39;UBERON:0002791!1.27e-16!29;UBERON:0003528!1.27e-16!29;UBERON:0001893!1.27e-16!29;UBERON:0000153!1.03e-15!94;UBERON:0007811!9.54e-15!86;UBERON:0000956!2.33e-12!21;UBERON:0001869!2.33e-12!21;UBERON:0000203!2.33e-12!21;UBERON:0002619!1.50e-10!17;UBERON:0002021!2.49e-08!10;UBERON:0000411!2.49e-08!10;UBERON:0001950!2.49e-08!10;UBERON:0004111!5.37e-08!122;UBERON:0000468!1.04e-07!333;UBERON:0000025!1.73e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.05e-34,95;UBERON:0000924,1.05e-34,95;UBERON:0006601,1.05e-34,95;UBERON:0001016,1.49e-34,75;UBERON:0001017,1.50e-34,73;UBERON:0002346,1.15e-33,64;UBERON:0003075,1.15e-33,64;UBERON:0007284,1.15e-33,64;UBERON:0000073,4.54e-30,54;UBERON:0010371,3.99e-29,73;UBERON:0001049,2.09e-28,52;UBERON:0005068,2.09e-28,52;UBERON:0006241,2.09e-28,52;UBERON:0007135,2.09e-28,52;UBERON:0003056,4.94e-26,49;UBERON:0000955,5.15e-25,47;UBERON:0006238,5.15e-25,47;UBERON:0002616,3.25e-24,46;UBERON:0002020,9.35e-22,34;UBERON:0003080,1.17e-21,40;UBERON:0002780,5.69e-21,39;UBERON:0001890,5.69e-21,39;UBERON:0006240,5.69e-21,39;UBERON:0010314,7.28e-19,92;UBERON:0003528,1.86e-18,29;UBERON:0002791,1.86e-18,29;UBERON:0001893,1.86e-18,29;UBERON:0000956,1.13e-13,21;UBERON:0001869,1.13e-13,21;UBERON:0000203,1.13e-13,21;UBERON:0002619,1.21e-11,17;UBERON:0002021,3.73e-09,10;UBERON:0000411,3.73e-09,10;UBERON:0001950,3.73e-09,10;UBERON:0004111,6.30e-09,122;UBERON:0000025,2.36e-08,114;UBERON:0003076,3.45e-07,12;UBERON:0003057,3.45e-07,12|phase1_expression=2.08193501236232,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,46.6037230027862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.31790010585369,2.75320128242522,1.56478268869608,6.32272953503295,7.24964403023757,13.4156630361256,3.21968769738334,0,0,0.725362142011344,0,0,0.286533439938757,0,88.4122933956442,69.2978182846363,106.483675789038,1.0165335962074,0.889294796111139,0.449949858640699,0,0,34.7536128201349,22.6688800139717,46.6603255388149,25.7861342213529,37.8584930432488,148.538511889978,127.441148129081,56.2232768396639,22.5236856892855,66.1837526359215,263.176955588539,215.791601363967,210.133737494541,95.3537860289301,50.0437410505181,91.159839847433,119.769506571592,126.621587257128,158.604581192329,228.042525156619,182.378123103651,108.857276361976,1.8931548333296,3.70300644523249,0.579728977403356,0,0,0,0,0,7.72444310724635,0,0,0,7.04217098883402,0,0,0,0.432982082022428,0,0,4.22480354960522,0.776813650941515,0.593768556259299,0.520455980298408,0,0.461230994512117,0.753613202763113,1.52865319276416,0,0,2.4581890676385,0,0.970601099684455,0.883366073841574,0,0,204.946557908083,165.881791796256,0,0,0,0,170.162166363879,255.742836975612,174.15693202843,310.102587223021,310.694280656352,162.698038890136,196.636410838122,1.01839363850316,0.124406970610093,1.51633655060205,73.2337658484929,10.4096354370163,14.0240283704418,22.3277040958633,34.8128129200502,70.2817036233217,87.6297846748373,106.819965998091,192.992714571306,3.01795190105979,12.2918952109083,10.205165201509,2.6303487891309,6.39508673218875,4.87553033131033,2.88094990971121,0.398068533636986,0,0,0,1.65700618028402,0.234526059981096,0.540186184383045,1.65721314909647,0.787056926989615,0.308534225774757,0.465067889500816,0.268273401399619,0.116765342367169,0.658239399653922,0.164167464079095,1.21603214318784,1.75439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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239857 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLQ9 | |||
|association_with_transcript=0bp_to_ENSMUST00000114292,ENSMUST00000120898,NM_001145977,NM_178721,uc007zqn.2,uc007zqo.2_5end | |||
|cluster_id=chr16:67621125..67621167,- | |||
|description=CAGE_peak_1_at_Cadm2_5end | |||
|id=chr16:67621125..67621167,- | |||
|ontology_enrichment_celltype=CL:0000221!4.07e-13!44;CL:0000133!4.07e-13!44;CL:0002319!5.55e-13!43;CL:0000540!7.38e-13!33;CL:0000047!7.38e-13!33;CL:0000031!7.38e-13!33;CL:0000404!7.38e-13!33;CL:0000117!1.52e-12!23;CL:0000337!1.52e-12!23;CL:0000393!3.33e-10!39;CL:0000211!3.33e-10!39;CL:0000055!4.60e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.34e-15,44;CL:0000133,9.34e-15,44;CL:0002319,1.32e-14,43;CL:0000540,3.12e-14,33;CL:0000047,3.12e-14,33;CL:0000031,3.12e-14,33;CL:0000404,3.12e-14,33;CL:0000117,7.03e-14,23;CL:0000337,7.03e-14,23;CL:0000393,1.49e-11,39;CL:0000211,1.49e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.08e-30!75;UBERON:0001016!1.08e-30!75;UBERON:0001017!1.09e-30!73;UBERON:0005743!1.09e-30!73;UBERON:0000033!2.95e-28!63;UBERON:0004121!3.97e-28!102;UBERON:0000924!3.97e-28!102;UBERON:0006601!3.97e-28!102;UBERON:0002346!9.95e-26!71;UBERON:0003075!9.95e-26!71;UBERON:0007284!9.95e-26!71;UBERON:0001049!1.75e-25!52;UBERON:0005068!1.75e-25!52;UBERON:0006241!1.75e-25!52;UBERON:0007135!1.75e-25!52;UBERON:0000955!1.62e-24!50;UBERON:0006238!1.62e-24!50;UBERON:0002616!8.65e-24!49;UBERON:0003056!2.27e-23!49;UBERON:0002020!1.46e-19!34;UBERON:0003080!1.79e-19!40;UBERON:0002780!7.30e-19!39;UBERON:0001890!7.30e-19!39;UBERON:0006240!7.30e-19!39;UBERON:0002791!1.27e-16!29;UBERON:0003528!1.27e-16!29;UBERON:0001893!1.27e-16!29;UBERON:0000153!1.03e-15!94;UBERON:0007811!9.54e-15!86;UBERON:0000956!2.33e-12!21;UBERON:0001869!2.33e-12!21;UBERON:0000203!2.33e-12!21;UBERON:0002619!1.50e-10!17;UBERON:0002021!2.49e-08!10;UBERON:0000411!2.49e-08!10;UBERON:0001950!2.49e-08!10;UBERON:0004111!5.37e-08!122;UBERON:0000468!1.04e-07!333;UBERON:0000025!1.73e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.05e-34,95;UBERON:0000924,1.05e-34,95;UBERON:0006601,1.05e-34,95;UBERON:0001016,1.49e-34,75;UBERON:0001017,1.50e-34,73;UBERON:0002346,1.15e-33,64;UBERON:0003075,1.15e-33,64;UBERON:0007284,1.15e-33,64;UBERON:0000073,4.54e-30,54;UBERON:0010371,3.99e-29,73;UBERON:0001049,2.09e-28,52;UBERON:0005068,2.09e-28,52;UBERON:0006241,2.09e-28,52;UBERON:0007135,2.09e-28,52;UBERON:0003056,4.94e-26,49;UBERON:0000955,5.15e-25,47;UBERON:0006238,5.15e-25,47;UBERON:0002616,3.25e-24,46;UBERON:0002020,9.35e-22,34;UBERON:0003080,1.17e-21,40;UBERON:0002780,5.69e-21,39;UBERON:0001890,5.69e-21,39;UBERON:0006240,5.69e-21,39;UBERON:0010314,7.28e-19,92;UBERON:0003528,1.86e-18,29;UBERON:0002791,1.86e-18,29;UBERON:0001893,1.86e-18,29;UBERON:0000956,1.13e-13,21;UBERON:0001869,1.13e-13,21;UBERON:0000203,1.13e-13,21;UBERON:0002619,1.21e-11,17;UBERON:0002021,3.73e-09,10;UBERON:0000411,3.73e-09,10;UBERON:0001950,3.73e-09,10;UBERON:0004111,6.30e-09,122;UBERON:0000025,2.36e-08,114;UBERON:0003076,3.45e-07,12;UBERON:0003057,3.45e-07,12 | |||
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37,22.5700734847935,31.4761328201812,21.0538447600868,21.0573632967332,9.94699326757986,6.39715115446595,8.34724208233517 | |||
|short_description=p1@Cadm2 | |||
}} |
Latest revision as of 17:26, 25 September 2015
Short description: | p1@Cadm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cadm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000114292, ENSMUST00000120898, NM_001145977, NM_178721, uc007zqn.2, uc007zqo.2_5end |
EntrezGene: | Cadm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.34e-15 | 44 |
neurectodermal cell | 9.34e-15 | 44 |
neural cell | 1.32e-14 | 43 |
neuron | 3.12e-14 | 33 |
neuronal stem cell | 3.12e-14 | 33 |
neuroblast | 3.12e-14 | 33 |
electrically signaling cell | 3.12e-14 | 33 |
CNS neuron (sensu Vertebrata) | 7.03e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.03e-14 | 23 |
electrically responsive cell | 1.49e-11 | 39 |
electrically active cell | 1.49e-11 | 39 |