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FFCP PHASE1:Mm9::chr3:80606711..80606762,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:80606711..80606762,-
|DHSsupport=NA
|short_description=p2@Gria2
|DPIdataset=NA
|description=CAGE_peak_2_at_Gria2_5end
|association_with_transcript=0bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|EntrezGene=14800
|EntrezGene=14800
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|association_with_transcript=0bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|cluster_id=chr3:80606711..80606762,-
|description=CAGE_peak_2_at_Gria2_5end
|id=chr3:80606711..80606762,-
|ontology_enrichment_celltype=CL:0000540!7.31e-14!33;CL:0000047!7.31e-14!33;CL:0000031!7.31e-14!33;CL:0000404!7.31e-14!33;CL:0000117!2.05e-12!23;CL:0000337!2.05e-12!23;CL:0002319!8.62e-12!43;CL:0000221!9.54e-12!44;CL:0000133!9.54e-12!44;CL:0000393!2.30e-09!39;CL:0000211!2.30e-09!39;CL:0000055!7.17e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.87e-16,33;CL:0000047,2.87e-16,33;CL:0000031,2.87e-16,33;CL:0000404,2.87e-16,33;CL:0000117,4.43e-15,23;CL:0000337,4.43e-15,23;CL:0000393,5.45e-12,39;CL:0000211,5.45e-12,39;CL:0002319,2.57e-11,43;CL:0000221,8.40e-11,44;CL:0000133,8.40e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.97e-30!102;UBERON:0000924!2.97e-30!102;UBERON:0006601!2.97e-30!102;UBERON:0001017!4.57e-30!73;UBERON:0005743!4.57e-30!73;UBERON:0000073!1.16e-29!75;UBERON:0001016!1.16e-29!75;UBERON:0002346!2.59e-29!71;UBERON:0003075!2.59e-29!71;UBERON:0007284!2.59e-29!71;UBERON:0000033!4.55e-25!63;UBERON:0001049!5.95e-25!52;UBERON:0005068!5.95e-25!52;UBERON:0006241!5.95e-25!52;UBERON:0007135!5.95e-25!52;UBERON:0000955!2.98e-24!50;UBERON:0006238!2.98e-24!50;UBERON:0002616!1.76e-23!49;UBERON:0003056!1.06e-21!49;UBERON:0002020!5.21e-20!34;UBERON:0003080!1.41e-19!40;UBERON:0002780!7.54e-19!39;UBERON:0001890!7.54e-19!39;UBERON:0006240!7.54e-19!39;UBERON:0002791!2.20e-17!29;UBERON:0003528!2.20e-17!29;UBERON:0001893!2.20e-17!29;UBERON:0000956!1.06e-12!21;UBERON:0001869!1.06e-12!21;UBERON:0000203!1.06e-12!21;UBERON:0007811!4.97e-12!86;UBERON:0000153!8.00e-12!94;UBERON:0002619!2.19e-10!17;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.44e-33,73;UBERON:0001016,5.53e-32,75;UBERON:0002346,4.14e-31,64;UBERON:0003075,4.14e-31,64;UBERON:0007284,4.14e-31,64;UBERON:0000073,1.31e-30,54;UBERON:0001049,6.72e-29,52;UBERON:0005068,6.72e-29,52;UBERON:0006241,6.72e-29,52;UBERON:0007135,6.72e-29,52;UBERON:0004121,8.48e-27,95;UBERON:0000924,8.48e-27,95;UBERON:0006601,8.48e-27,95;UBERON:0000955,1.56e-25,47;UBERON:0006238,1.56e-25,47;UBERON:0002616,1.31e-24,46;UBERON:0010371,1.99e-24,73;UBERON:0003056,5.30e-23,49;UBERON:0002020,5.79e-23,34;UBERON:0003080,5.95e-22,40;UBERON:0002780,4.58e-21,39;UBERON:0001890,4.58e-21,39;UBERON:0006240,4.58e-21,39;UBERON:0003528,1.06e-19,29;UBERON:0002791,1.06e-19,29;UBERON:0001893,1.06e-19,29;UBERON:0010314,1.66e-18,92;UBERON:0000956,6.56e-14,21;UBERON:0001869,6.56e-14,21;UBERON:0000203,6.56e-14,21;UBERON:0002619,4.67e-11,17;UBERON:0002021,2.23e-10,10;UBERON:0000411,2.23e-10,10;UBERON:0001950,2.23e-10,10;UBERON:0003076,2.32e-07,12;UBERON:0003057,2.32e-07,12;UBERON:0002420,5.43e-07,8;UBERON:0007245,5.43e-07,8;UBERON:0010009,5.43e-07,8;UBERON:0010011,5.43e-07,8;UBERON:0000454,5.43e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,6.27181028664753,6.87688273053643,5.70448263155561,0,0,0,0,0,0.599200221036809,1.92109152660777,15.4497522339632,9.45041568321835,10.9368979902719,6.28432165688368,10.6016899656774,9.67677313798137,7.85932862349538,7.35375029288017,33.0347642998166,44.8182556679009,41.4737639791857,9.10015385338338,10.1551284398675,11.9810075228055,20.6595419261022,34.3285192119325,40.1859391653011,24.1595440088408,28.3319644790215,12.4887628702951,0.302904773332736,0.226714680320357,0,0,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0,0,0,1.48439043634778,0,4.60170631100957,1.38788261412909,3.34912026143355,0.922461989024234,2.56228488939458,4.58595957829249,0.879666139307728,0,0,0,0,0,0,0,64.9973369365635,58.0167377873271,0,0,0,0,77.5915512116982,75.0300988622547,33.8010207183605,93.8651329038293,100.49617473082,53.1937394072474,70.5749494344746,0.101839363850316,0.995255764880744,6.57079171927554,3.57751155007006,0.910843100738926,0.689706313300419,1.62055916824814,5.27466862425003,6.5995404176788,8.32739181851524,5.528401749024,9.31332134660456,0,0.945530400839096,1.40760899331159,1.31517439456545,1.39023624612799,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,84.9571392199074,38.3834204174731,0.330418782983798,0,1.49301775374664,1.16118335930219,1.03093969057675,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.974820435595601,0,0,0.398282546508734,0,1.02823661348756,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,46.2385699164841,57.9025731765484,0,0,1.89304931649754,3.51394869866975,5.60100834105277,2.38968797952552,2.67358408898873,1.13230612315533,1.61924280669958,6.13737301613755,8.69633111482352,79.6876864726081,0,1.06839362200353,1.14020871547503,0.164970122972535,0,0,0,1.13163047853539,0.590603785761546,0.614870295887855,0.258428293168221,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,11.9153862013826,1.26042765821917,0,0.857348140126369,3.3694644392032,3.74574516964348,5.43011767986999,2.13125464380219,0,0,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0.492422699235184,0.582961673259701,34.4891061739548,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.414599921413271,0,0.632671987162271,0.406638934253697,0.324016022465404,1.04544148007234,0,0.674321731924103,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.469428954583016,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,101.655331671072,78.7156154427272,81.9240584218337,60.8360265496654,82.8949848922477,84.6041165076465,83.7027900287439,70.7004289062026,91.0816242058251,80.7706086332839,1.03787347584177,3.19219898720825,6.4878770186571,5.59145449257076,4.19226325255965,3.30918315210025,10.6678429344775,8.03536723231687,8.66481865897901,6.06473308233114,6.84394109703647,6.60192194851267,8.05316964240989,7.81106859339405,9.70659425349864,6.66811167796303,10.0819363572024,8.29509647993932,4.53294490883637,7.80154276712306,6.85738504770831,8.69631450180754,6.19934093863034,8.28474574804273,7.52875043322645,7.1922416707925,10.6098224266208,8.94437018888666,7.19761803383067,8.97827634652382,7.3553711236988,7.97886307242064,7.7753898202241,6.35241048862461,6.36591816237767,5.74564329257276,4.91256377735358,5.15690529715916,1.72159498861959,0.882365676478062,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,6.27181028664753,6.87688273053643,5.70448263155561,0,0,0,0,0,0.599200221036809,1.92109152660777,15.4497522339632,9.45041568321835,10.9368979902719,6.28432165688368,10.6016899656774,9.67677313798137,7.85932862349538,7.35375029288017,33.0347642998166,44.8182556679009,41.4737639791857,9.10015385338338,10.1551284398675,11.9810075228055,20.6595419261022,34.3285192119325,40.1859391653011,24.1595440088408,28.3319644790215,12.4887628702951,0.302904773332736,0.226714680320357,0,0,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0,0,0,1.48439043634778,0,4.60170631100957,1.38788261412909,3.34912026143355,0.922461989024234,2.56228488939458,4.58595957829249,0.879666139307728,0,0,0,0,0,0,0,64.9973369365635,58.0167377873271,0,0,0,0,77.5915512116982,75.0300988622547,33.8010207183605,93.8651329038293,100.49617473082,53.1937394072474,70.5749494344746,0.101839363850316,0.995255764880744,6.57079171927554,3.57751155007006,0.910843100738926,0.689706313300419,1.62055916824814,5.27466862425003,6.5995404176788,8.32739181851524,5.528401749024,9.31332134660456,0,0.945530400839096,1.40760899331159,1.31517439456545,1.39023624612799,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,84.9571392199074,38.3834204174731,0.330418782983798,0,1.49301775374664,1.16118335930219,1.03093969057675,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.974820435595601,0,0,0.398282546508734,0,1.02823661348756,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,46.2385699164841,57.9025731765484,0,0,1.89304931649754,3.51394869866975,5.60100834105277,2.38968797952552,2.67358408898873,1.13230612315533,1.61924280669958,6.13737301613755,8.69633111482352,79.6876864726081,0,1.06839362200353,1.14020871547503,0.164970122972535,0,0,0,1.13163047853539,0.590603785761546,0.614870295887855,0.258428293168221,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,11.9153862013826,1.26042765821917,0,0.857348140126369,3.3694644392032,3.74574516964348,5.43011767986999,2.13125464380219,0,0,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0.492422699235184,0.582961673259701,34.4891061739548,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.414599921413271,0,0.632671987162271,0.406638934253697,0.324016022465404,1.04544148007234,0,0.674321731924103,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.469428954583016,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,101.655331671072,78.7156154427272,81.9240584218337,60.8360265496654,82.8949848922477,84.6041165076465,83.7027900287439,70.7004289062026,91.0816242058251,80.7706086332839,1.03787347584177,3.19219898720825,6.4878770186571,5.59145449257076,4.19226325255965,3.30918315210025,10.6678429344775,8.03536723231687,8.66481865897901,6.06473308233114,6.84394109703647,6.60192194851267,8.05316964240989,7.81106859339405,9.70659425349864,6.66811167796303,10.0819363572024,8.29509647993932,4.53294490883637,7.80154276712306,6.85738504770831,8.69631450180754,6.19934093863034,8.28474574804273,7.52875043322645,7.1922416707925,10.6098224266208,8.94437018888666,7.19761803383067,8.97827634652382,7.3553711236988,7.97886307242064,7.7753898202241,6.35241048862461,6.36591816237767,5.74564329257276,4.91256377735358,5.15690529715916,1.72159498861959,0.882365676478062,0.927471342481686
|short_description=p2@Gria2
}}
}}

Latest revision as of 17:45, 25 September 2015

Short description:p2@Gria2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gria2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000075316, ENSMUST00000107745, ENSMUST00000107746, NM_001039195, NM_001083806, NM_013540, uc008poa.1, uc008pob.1, uc008poc.1, uc008pod.1, uc008poe.1_5end
EntrezGene:Gria2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gria2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F344.82
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D741.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.16
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B265.00
cerebellum, neonate N30.CNhs11135.1395-42I258.02
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A477.59
corpus striatum, adult.CNhs10487.19-21D875.03
corpus striatum, neonate N00.CNhs11226.630-43F133.80
cortex, adult.CNhs10473.12-14D593.87
cortex, neonate N30.CNhs11107.1392-42F2100.50
diencephalon, adult.CNhs10482.20-12F253.19
diencephalon, neonate N30.CNhs11201.1388-42B270.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E78.33
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E884.96
hippocampus, neonate N00.CNhs11228.627-43G138.38
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C246.24
medulla oblongata, neonate N30.CNhs11200.1396-42A357.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I979.69
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C934.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1101.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A278.72
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A381.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D760.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A482.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A584.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A683.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A770.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A980.77
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.87e-1633
neuronal stem cell2.87e-1633
neuroblast2.87e-1633
electrically signaling cell2.87e-1633
CNS neuron (sensu Vertebrata)4.43e-1523
neuroblast (sensu Vertebrata)4.43e-1523
electrically responsive cell5.45e-1239
electrically active cell5.45e-1239
neural cell2.57e-1143
ectodermal cell8.40e-1144
neurectodermal cell8.40e-1144

Uber anatomy
Ontology termp-valuen
central nervous system1.44e-3373
nervous system5.53e-3275
neurectoderm4.14e-3164
neural plate4.14e-3164
presumptive neural plate4.14e-3164
regional part of nervous system1.31e-3054
neural tube6.72e-2952
neural rod6.72e-2952
future spinal cord6.72e-2952
neural keel6.72e-2952
ectoderm-derived structure8.48e-2795
ectoderm8.48e-2795
presumptive ectoderm8.48e-2795
brain1.56e-2547
future brain1.56e-2547
regional part of brain1.31e-2446
ecto-epithelium1.99e-2473
pre-chordal neural plate5.30e-2349
gray matter5.79e-2334
anterior neural tube5.95e-2240
regional part of forebrain4.58e-2139
forebrain4.58e-2139
future forebrain4.58e-2139
brain grey matter1.06e-1929
regional part of telencephalon1.06e-1929
telencephalon1.06e-1929
structure with developmental contribution from neural crest1.66e-1892
cerebral cortex6.56e-1421
cerebral hemisphere6.56e-1421
pallium6.56e-1421
regional part of cerebral cortex4.67e-1117
occipital lobe2.23e-1010
visual cortex2.23e-1010
neocortex2.23e-1010
posterior neural tube2.32e-0712
chordal neural plate2.32e-0712
basal ganglion5.43e-078
nuclear complex of neuraxis5.43e-078
aggregate regional part of brain5.43e-078
collection of basal ganglia5.43e-078
cerebral subcortex5.43e-078
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