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FFCP PHASE1:Mm9::chr19:4712118..4712173,+: Difference between revisions

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(Created page with "{{FFCP |id=chr19:4712118..4712173,+ |short_description=p2@Spnb3 |description=CAGE_peak_2_at_Spnb3_5end |association_with_transcript=-234bp_to_uc008gao.1_5end |EntrezGene=...")
 
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{{FFCP
{{FFCP
|id=chr19:4712118..4712173,+
|DHSsupport=NA
|short_description=p2@Spnb3
|DPIdataset=NA
|description=CAGE_peak_2_at_Spnb3_5end
|association_with_transcript=-234bp_to_uc008gao.1_5end
|EntrezGene=20743
|EntrezGene=20743
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-234bp_to_uc008gao.1_5end
|cluster_id=chr19:4712118..4712173,+
|description=CAGE_peak_2_at_Spnb3_5end
|id=chr19:4712118..4712173,+
|ontology_enrichment_celltype=CL:0000117!8.59e-18!23;CL:0000337!8.59e-18!23;CL:0000540!1.64e-16!33;CL:0000047!1.64e-16!33;CL:0000031!1.64e-16!33;CL:0000404!1.64e-16!33;CL:0000393!1.55e-11!39;CL:0000211!1.55e-11!39;CL:0000221!6.39e-11!44;CL:0000133!6.39e-11!44;CL:0002319!8.81e-11!43;CL:0000055!2.82e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.93e-23,23;CL:0000337,9.93e-23,23;CL:0000540,7.31e-16,33;CL:0000047,7.31e-16,33;CL:0000031,7.31e-16,33;CL:0000404,7.31e-16,33;CL:0000393,7.58e-12,39;CL:0000211,7.58e-12,39;CL:0002319,7.59e-10,43;CL:0000221,2.07e-09,44;CL:0000133,2.07e-09,44;CL:0002609,3.10e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.66e-28!71;UBERON:0003075!3.66e-28!71;UBERON:0007284!3.66e-28!71;UBERON:0001017!1.26e-26!73;UBERON:0005743!1.26e-26!73;UBERON:0000073!1.80e-26!75;UBERON:0001016!1.80e-26!75;UBERON:0004121!2.35e-25!102;UBERON:0000924!2.35e-25!102;UBERON:0006601!2.35e-25!102;UBERON:0000033!3.33e-25!63;UBERON:0001049!8.67e-24!52;UBERON:0005068!8.67e-24!52;UBERON:0006241!8.67e-24!52;UBERON:0007135!8.67e-24!52;UBERON:0003056!1.76e-23!49;UBERON:0000955!2.29e-22!50;UBERON:0006238!2.29e-22!50;UBERON:0002616!7.66e-22!49;UBERON:0002020!1.05e-19!34;UBERON:0003080!3.45e-19!40;UBERON:0002780!1.80e-18!39;UBERON:0001890!1.80e-18!39;UBERON:0006240!1.80e-18!39;UBERON:0002791!2.57e-16!29;UBERON:0003528!2.57e-16!29;UBERON:0001893!2.57e-16!29;UBERON:0007811!2.12e-12!86;UBERON:0000153!4.91e-11!94;UBERON:0000956!7.64e-11!21;UBERON:0001869!7.64e-11!21;UBERON:0000203!7.64e-11!21;UBERON:0002619!3.07e-08!17;UBERON:0002021!5.06e-07!10;UBERON:0000411!5.06e-07!10;UBERON:0001950!5.06e-07!10;UBERON:0002420!7.58e-07!8;UBERON:0007245!7.58e-07!8;UBERON:0010009!7.58e-07!8;UBERON:0010011!7.58e-07!8;UBERON:0000454!7.58e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.33e-37,64;UBERON:0003075,8.33e-37,64;UBERON:0007284,8.33e-37,64;UBERON:0000073,6.10e-32,54;UBERON:0001049,7.32e-30,52;UBERON:0005068,7.32e-30,52;UBERON:0006241,7.32e-30,52;UBERON:0007135,7.32e-30,52;UBERON:0010371,1.55e-29,73;UBERON:0003056,7.58e-29,49;UBERON:0001017,9.64e-29,73;UBERON:0001016,2.12e-27,75;UBERON:0004121,9.57e-27,95;UBERON:0000924,9.57e-27,95;UBERON:0006601,9.57e-27,95;UBERON:0002020,6.93e-26,34;UBERON:0000955,2.67e-25,47;UBERON:0006238,2.67e-25,47;UBERON:0002616,1.24e-24,46;UBERON:0003080,2.88e-23,40;UBERON:0002780,2.43e-22,39;UBERON:0001890,2.43e-22,39;UBERON:0006240,2.43e-22,39;UBERON:0003528,1.93e-21,29;UBERON:0002791,1.93e-21,29;UBERON:0001893,1.93e-21,29;UBERON:0010314,2.38e-21,92;UBERON:0000956,2.96e-14,21;UBERON:0001869,2.96e-14,21;UBERON:0000203,2.96e-14,21;UBERON:0002619,7.86e-11,17;UBERON:0002021,1.09e-08,10;UBERON:0000411,1.09e-08,10;UBERON:0001950,1.09e-08,10;UBERON:0002420,1.85e-08,8;UBERON:0007245,1.85e-08,8;UBERON:0010009,1.85e-08,8;UBERON:0010011,1.85e-08,8;UBERON:0000454,1.85e-08,8;UBERON:0003076,5.15e-07,12;UBERON:0003057,5.15e-07,12
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.4401275633236,31.2104677770499,32.3254015788151,0,0,0,0,0,0,0.384218305321555,21.9821978093973,22.8160035780557,23.135745748652,12.8542942981712,12.589506834242,23.1507610516263,22.6195311603038,33.0918763179608,18.7196997698961,12.7687338085188,17.2039317246993,30.9932776165956,23.6038120494217,32.8175423450759,22.0554569211091,14.069065250792,17.72459674211,15.3206864446307,15.0913981647049,28.1463163196204,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0,0.693941307064543,1.52232739156071,1.38369298353635,1.05505848386836,0.705532242814229,0,0,0,0,0,0.220841518460394,0,0,15.8101630386235,12.9856958224342,0.255457055208591,0,0,0,18.4242486467932,7.32000964509802,17.2146462394624,10.081810571152,7.92717917724025,11.2205544062162,10.3834408363365,0.305518091550949,0,0,2.31486041475121,1.56144531555244,3.90833577536904,5.04173963454978,7.53524089178575,10.4095843701532,8.83984669965463,7.87094486301722,7.50239775143145,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0,1.19420560091096,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,19.551876352064,0.330418782983798,0,1.2797295032114,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,8.99083303931635,8.55645312123083,0,0,2.52406575533005,1.17131623288992,1.07711698866399,0.477937595905104,0,0.849229592366497,0.404810701674894,0.584511715822624,0.790575555893047,7.39039027770156,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0,0,0,0.680879211507576,1.26042765821917,1.03486947026204,0.428674070063185,1.41872186913819,2.67553226403106,1.48094118541909,1.522324745573,0,0.21183207086382,0,0,0,0,0.238744688006273,0.164140899745061,0.291480836629851,7.78786268444141,0,0,0,0,0,0,0,0,0.138199973804424,0,0.790839983952838,1.21991680276109,0.540026704109006,0,0.655087691238533,0,0.330613822901344,0.26175594198403,0,0,2.25477175473676,1.94371509857172,0.992750942742586,1.36115831840833,2.0665571756437,2.02747350588934,1.05621514781179,0.5208175393758,1.46803082195995,0.724752362478018,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.358855426437903,0,0,0.187682475451182,0,0,0,12.9892923801925,10.1271552031579,10.8850147553485,13.748254587495,7.53590771747707,15.107877947794,10.1253375034771,8.55610286126019,11.3285602246051,14.497288729051,3.32119512269365,13.5668456956351,4.43907374960749,1.94485373654635,3.5634237646757,4.96377472815038,2.44471400581777,2.88449080134452,1.92551525755089,1.51618327058278,2.02783439912192,3.2066478035633,2.90288673156635,2.36893063898016,2.29741875822453,3.33405583898152,2.89710814862139,2.89363830695558,2.06042950401653,2.50238164228475,2.40008476669791,1.24233064311536,0.953744759789284,2.32554266611726,2.4468438907986,3.29996970777538,1.64635175585495,1.8414879800649,1.90125759384206,1.68342681497322,2.25406534435931,2.56111654176465,5.32000356120596,3.25367366490529,1.54325288784913,6.24526444844865,1.63752125911786,2.57845264857958,1.14772999241306,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.4401275633236,31.2104677770499,32.3254015788151,0,0,0,0,0,0,0.384218305321555,21.9821978093973,22.8160035780557,23.135745748652,12.8542942981712,12.589506834242,23.1507610516263,22.6195311603038,33.0918763179608,18.7196997698961,12.7687338085188,17.2039317246993,30.9932776165956,23.6038120494217,32.8175423450759,22.0554569211091,14.069065250792,17.72459674211,15.3206864446307,15.0913981647049,28.1463163196204,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0,0.693941307064543,1.52232739156071,1.38369298353635,1.05505848386836,0.705532242814229,0,0,0,0,0,0.220841518460394,0,0,15.8101630386235,12.9856958224342,0.255457055208591,0,0,0,18.4242486467932,7.32000964509802,17.2146462394624,10.081810571152,7.92717917724025,11.2205544062162,10.3834408363365,0.305518091550949,0,0,2.31486041475121,1.56144531555244,3.90833577536904,5.04173963454978,7.53524089178575,10.4095843701532,8.83984669965463,7.87094486301722,7.50239775143145,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0,1.19420560091096,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,19.551876352064,0.330418782983798,0,1.2797295032114,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0.329397909448022,0,0,0.38992817423824,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.295220295959204,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,8.99083303931635,8.55645312123083,0,0,2.52406575533005,1.17131623288992,1.07711698866399,0.477937595905104,0,0.849229592366497,0.404810701674894,0.584511715822624,0.790575555893047,7.39039027770156,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0,0,0,0.680879211507576,1.26042765821917,1.03486947026204,0.428674070063185,1.41872186913819,2.67553226403106,1.48094118541909,1.522324745573,0,0.21183207086382,0,0,0,0,0.238744688006273,0.164140899745061,0.291480836629851,7.78786268444141,0,0,0,0,0,0,0,0,0.138199973804424,0,0.790839983952838,1.21991680276109,0.540026704109006,0,0.655087691238533,0,0.330613822901344,0.26175594198403,0,0,2.25477175473676,1.94371509857172,0.992750942742586,1.36115831840833,2.0665571756437,2.02747350588934,1.05621514781179,0.5208175393758,1.46803082195995,0.724752362478018,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.358855426437903,0,0,0.187682475451182,0,0,0,12.9892923801925,10.1271552031579,10.8850147553485,13.748254587495,7.53590771747707,15.107877947794,10.1253375034771,8.55610286126019,11.3285602246051,14.497288729051,3.32119512269365,13.5668456956351,4.43907374960749,1.94485373654635,3.5634237646757,4.96377472815038,2.44471400581777,2.88449080134452,1.92551525755089,1.51618327058278,2.02783439912192,3.2066478035633,2.90288673156635,2.36893063898016,2.29741875822453,3.33405583898152,2.89710814862139,2.89363830695558,2.06042950401653,2.50238164228475,2.40008476669791,1.24233064311536,0.953744759789284,2.32554266611726,2.4468438907986,3.29996970777538,1.64635175585495,1.8414879800649,1.90125759384206,1.68342681497322,2.25406534435931,2.56111654176465,5.32000356120596,3.25367366490529,1.54325288784913,6.24526444844865,1.63752125911786,2.57845264857958,1.14772999241306,0.220591419119515,0.231867835620421
|short_description=p2@Spnb3
}}
}}

Latest revision as of 21:44, 25 September 2015

Short description:p2@Spnb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Spnb3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -234bp_to_uc008gao.1_5end
EntrezGene:Spnb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Spnb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C338.44
Mouse Granule cells, donor2.CNhs12357.11731-123E331.21
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.42
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F117.21
cortex, adult.CNhs10473.12-14D510.08
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C610.41
eyeball, neonate N01.CNhs11140.1532-43E78.84
eyeball, neonate N02.CNhs11205.1551-44G87.87
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G119.55
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A38.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm8.33e-3764
neural plate8.33e-3764
presumptive neural plate8.33e-3764
regional part of nervous system6.10e-3254
neural tube7.32e-3052
neural rod7.32e-3052
future spinal cord7.32e-3052
neural keel7.32e-3052
ecto-epithelium1.55e-2973
pre-chordal neural plate7.58e-2949
central nervous system9.64e-2973
nervous system2.12e-2775
ectoderm-derived structure9.57e-2795
ectoderm9.57e-2795
presumptive ectoderm9.57e-2795
gray matter6.93e-2634
brain2.67e-2547
future brain2.67e-2547
regional part of brain1.24e-2446
anterior neural tube2.88e-2340
regional part of forebrain2.43e-2239
forebrain2.43e-2239
future forebrain2.43e-2239
brain grey matter1.93e-2129
regional part of telencephalon1.93e-2129
telencephalon1.93e-2129
structure with developmental contribution from neural crest2.38e-2192
cerebral cortex2.96e-1421
cerebral hemisphere2.96e-1421
pallium2.96e-1421
regional part of cerebral cortex7.86e-1117
occipital lobe1.09e-0810
visual cortex1.09e-0810
neocortex1.09e-0810
basal ganglion1.85e-088
nuclear complex of neuraxis1.85e-088
aggregate regional part of brain1.85e-088
collection of basal ganglia1.85e-088
cerebral subcortex1.85e-088
posterior neural tube5.15e-0712
chordal neural plate5.15e-0712
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