FFCP PHASE1:Mm9::chr19:5118372..5118390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16594 | |EntrezGene=16594 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YS4 | |UniProt=Q91YS4 | ||
|association_with_transcript=17bp_to_NM_008451,NR_045528,uc008gcg.1,uc008gch.1_5end | |association_with_transcript=17bp_to_NM_008451,NR_045528,uc008gcg.1,uc008gch.1_5end | ||
|cluster_id=chr19:5118372..5118390,- | |||
|description=CAGE_peak_3_at_Klc2_5end | |description=CAGE_peak_3_at_Klc2_5end | ||
|id=chr19:5118372..5118390,- | |id=chr19:5118372..5118390,- | ||
|ontology_enrichment_celltype=CL:0000393!2.29e-10!39;CL:0000211!2.29e-10!39;CL:0002321!9.93e-10!70;CL:0000220!9.93e-10!70;CL:0000055!1.16e-09!50;CL:0000540!1.39e-09!33;CL:0000047!1.39e-09!33;CL:0000031!1.39e-09!33;CL:0000404!1.39e-09!33;CL:0002319!1.72e-09!43;CL:0000221!1.98e-09!44;CL:0000133!1.98e-09!44;CL:0000117!2.86e-09!23;CL:0000337!2.86e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.03e-11,39;CL:0000211,3.03e-11,39;CL:0000117,1.09e-10,23;CL:0000337,1.09e-10,23;CL:0002321,3.19e-10,70;CL:0000540,3.18e-09,33;CL:0000047,3.18e-09,33;CL:0000031,3.18e-09,33;CL:0000404,3.18e-09,33;CL:0002319,5.60e-09,43;CL:0000221,1.32e-08,44;CL:0000133,1.32e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.80e-19!75;UBERON:0001016!1.80e-19!75;UBERON:0001017!1.49e-18!73;UBERON:0005743!1.49e-18!73;UBERON:0004121!1.72e-16!102;UBERON:0000924!1.72e-16!102;UBERON:0006601!1.72e-16!102;UBERON:0001049!9.91e-15!52;UBERON:0005068!9.91e-15!52;UBERON:0006241!9.91e-15!52;UBERON:0007135!9.91e-15!52;UBERON:0000955!7.47e-14!50;UBERON:0006238!7.47e-14!50;UBERON:0002616!2.20e-13!49;UBERON:0002020!1.20e-12!34;UBERON:0002346!2.11e-11!71;UBERON:0003075!2.11e-11!71;UBERON:0007284!2.11e-11!71;UBERON:0000033!5.37e-11!63;UBERON:0002791!4.18e-10!29;UBERON:0003528!4.18e-10!29;UBERON:0001893!4.18e-10!29;UBERON:0003080!3.62e-09!40;UBERON:0002780!1.18e-08!39;UBERON:0001890!1.18e-08!39;UBERON:0006240!1.18e-08!39;UBERON:0003076!4.89e-07!12;UBERON:0003057!4.89e-07!12;UBERON:0003056!7.43e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-21,75;UBERON:0001017,3.19e-20,73;UBERON:0000073,2.89e-18,54;UBERON:0001049,2.13e-16,52;UBERON:0005068,2.13e-16,52;UBERON:0006241,2.13e-16,52;UBERON:0007135,2.13e-16,52;UBERON:0004121,2.31e-15,95;UBERON:0000924,2.31e-15,95;UBERON:0006601,2.31e-15,95;UBERON:0002020,9.33e-14,34;UBERON:0000955,2.05e-12,47;UBERON:0006238,2.05e-12,47;UBERON:0002616,9.33e-12,46;UBERON:0002346,3.13e-11,64;UBERON:0003075,3.13e-11,64;UBERON:0007284,3.13e-11,64;UBERON:0003076,1.41e-10,12;UBERON:0003057,1.41e-10,12;UBERON:0002021,2.90e-10,10;UBERON:0000411,2.90e-10,10;UBERON:0001950,2.90e-10,10;UBERON:0003528,6.32e-10,29;UBERON:0002791,6.32e-10,29;UBERON:0001893,6.32e-10,29;UBERON:0010371,6.57e-10,73;UBERON:0003080,1.72e-08,40;UBERON:0002780,8.53e-08,39;UBERON:0001890,8.53e-08,39;UBERON:0006240,8.53e-08,39;UBERON:0010314,3.04e-07,92;UBERON:0002240,6.10e-07,6;UBERON:0005174,6.10e-07,6;UBERON:0001137,6.10e-07,6 | |||
|phase1_expression=0.640595388419176,1.74487703819681,0.909998478779072,0.90739263392049,2.50447864973174,0.839396359559449,1.63528848416868,0,0,0.468129052643987,0,0.159544317990673,0,0,0,0,0,0,0,0.42438965179803,1.87095238332354,0.297872853602656,0.261199789138935,1.43993180514066,1.37645568640302,2.29692785646008,0.86152399231815,1.939241094173,0.760093677825496,0.252030129759931,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0.523523743973798,0,0,0,1.6366586336825,1.72340783073175,1.46837401729345,2.34717403304412,0.436050312760893,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,1.02903774414379,2.0057340795713,0,1.82084814773638,2.11596391708813,1.90149421051854,1.69422266034566,2.66788438833342,2.6996991518442,0.988866362566974,0,1.79760066311043,0.768436610643109,0.414758449233911,0.540023753326763,0.841299845405528,4.85606673486466,3.75476519617743,0.734944795289724,0.479227355091182,0.919218786610021,11.0115880999389,4.85211884723713,5.37622866396852,2.1101806036831,1.82975287204819,3.12548022334056,8.37548997004143,2.8138130501584,3.81995619442025,2.06240009831567,3.84403538157578,1.67759501242771,2.27178579999552,1.66257432234928,0.289864488701678,0,1.3599426674155,0,0.649776417447669,0,1.82577746171277,1.36344258062446,2.07828803682295,0.70667914902068,0.563373679106722,2.56652954828636,5.09610479413291,7.11066703153331,0,0.253359865475099,0.505524445014783,0.68510327831436,0,1.1875371125186,1.38788261412909,1.52232739156071,0.461230994512117,0.452167921657868,0.23517741427141,0.376999773989026,0.247194967734374,0.289198713839823,0,0.808834249737046,0.220841518460394,0,0,2.92780797011547,2.93225389538837,0,0.11981512450592,0,0,3.89455662452539,3.66000482254901,0.879580464790051,4.17178368461463,2.55715457330331,3.53239675751252,3.40706652442291,0.203678727700633,0.248813941220186,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.340182495756639,0.512454881139399,0.843315521037559,0.258703370739016,0.431135985865684,0.945530400839096,0.175951124163949,0.876782929710299,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.164167464079095,0.729619285912702,0.730999937126662,0,0.402619256281115,2.73376933133365,0.823236899034275,0.330418782983798,0.264450566663544,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.444756087689741,0.760902504450237,0.474529061544512,0.329397909448022,0,0.596869416123452,0.58489226135736,1.79763881730844,0,0.597423819763102,0.758671603812327,0.685491075658373,0,1.22190796707189,0.969762435838129,0.49095073923223,1.26473074248515,0.738050739898011,1.09899109488962,0.493588655687202,1.1858105083486,0,0,0,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0.568474235311454,0.977789858652155,0.169745085775188,0.469380496577004,0.335012514883631,0,0.390267295715598,1.10344600874334,0.221464689648775,0.797273843287435,0.163863314715738,0.518054945597687,0.433947175744535,0,0.54390568381871,1.47529281905711,0.275936746304732,7.22477654945064,8.08760637486202,0.819674726883377,0.252470927204373,0.631016438832513,0.390438744296638,0.430846795465598,1.43381278771531,1.33679204449436,1.69845918473299,1.61924280669958,0.584511715822624,0.790575555893047,2.24924921495265,1.70328102249922,1.06839362200353,0.325773918707152,0.164970122972535,0,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.776152102696527,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.422190474497091,0.835606408021955,1.47726809770555,0.291480836629851,9.27126510052548,0,0.412773735926445,0,0,0.136694227721025,0.228778173206523,0,0.279902904647316,0,0.954670618015114,0.316335993581135,0.813277868507395,0.324016022465404,0.836353184057875,0.218362563746178,0.404593039154462,0.661227645802687,0,0.518459893167171,0.621339313086926,4.50954350947352,1.19613236835183,0.992750942742586,1.55560950675238,1.03327858782185,0.844780627453891,0.58678619322877,1.8228613878153,2.30690557736564,0.483168241652012,2.01621004380506,0,0.810900861160657,0.410843828659309,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,1.55390167361845,0.897138566094757,1.00730769818447,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0.501572104035363,1.12950368523413,2.76195141904306,2.86447756719698,1.54667864109319,5.48066015816514,5.2877572817279,2.70009000092722,4.05289082901798,4.98456649882625,6.73088405277366,0.726511433089237,0.399024873401031,0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|phase1_expression=0.640595388419176,1.74487703819681,0.909998478779072,0.90739263392049,2.50447864973174,0.839396359559449,1.63528848416868,0,0,0.468129052643987,0,0.159544317990673,0,0,0,0,0,0,0,0.42438965179803,1.87095238332354,0.297872853602656,0.261199789138935,1.43993180514066,1.37645568640302,2.29692785646008,0.86152399231815,1.939241094173,0.760093677825496,0.252030129759931,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0.523523743973798,0,0,0,1.6366586336825,1.72340783073175,1.46837401729345,2.34717403304412,0.436050312760893,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,1.02903774414379,2.0057340795713,0,1.82084814773638,2.11596391708813,1.90149421051854,1.69422266034566,2.66788438833342,2.6996991518442,0.988866362566974,0,1.79760066311043,0.768436610643109,0.414758449233911,0.540023753326763,0.841299845405528,4.85606673486466,3.75476519617743,0.734944795289724,0.479227355091182,0.919218786610021,11.0115880999389,4.85211884723713,5.37622866396852,2.1101806036831,1.82975287204819,3.12548022334056,8.37548997004143,2.8138130501584,3.81995619442025,2.06240009831567,3.84403538157578,1.67759501242771,2.27178579999552,1.66257432234928,0.289864488701678,0,1.3599426674155,0,0.649776417447669,0,1.82577746171277,1.36344258062446,2.07828803682295,0.70667914902068,0.563373679106722,2.56652954828636,5.09610479413291,7.11066703153331,0,0.253359865475099,0.505524445014783,0.68510327831436,0,1.1875371125186,1.38788261412909,1.52232739156071,0.461230994512117,0.452167921657868,0.23517741427141,0.376999773989026,0.247194967734374,0.289198713839823,0,0.808834249737046,0.220841518460394,0,0,2.92780797011547,2.93225389538837,0,0.11981512450592,0,0,3.89455662452539,3.66000482254901,0.879580464790051,4.17178368461463,2.55715457330331,3.53239675751252,3.40706652442291,0.203678727700633,0.248813941220186,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.340182495756639,0.512454881139399,0.843315521037559,0.258703370739016,0.431135985865684,0.945530400839096,0.175951124163949,0.876782929710299,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.164167464079095,0.729619285912702,0.730999937126662,0,0.402619256281115,2.73376933133365,0.823236899034275,0.330418782983798,0.264450566663544,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.444756087689741,0.760902504450237,0.474529061544512,0.329397909448022,0,0.596869416123452,0.58489226135736,1.79763881730844,0,0.597423819763102,0.758671603812327,0.685491075658373,0,1.22190796707189,0.969762435838129,0.49095073923223,1.26473074248515,0.738050739898011,1.09899109488962,0.493588655687202,1.1858105083486,0,0,0,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0.568474235311454,0.977789858652155,0.169745085775188,0.469380496577004,0.335012514883631,0,0.390267295715598,1.10344600874334,0.221464689648775,0.797273843287435,0.163863314715738,0.518054945597687,0.433947175744535,0,0.54390568381871,1.47529281905711,0.275936746304732,7.22477654945064,8.08760637486202,0.819674726883377,0.252470927204373,0.631016438832513,0.390438744296638,0.430846795465598,1.43381278771531,1.33679204449436,1.69845918473299,1.61924280669958,0.584511715822624,0.790575555893047,2.24924921495265,1.70328102249922,1.06839362200353,0.325773918707152,0.164970122972535,0,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.776152102696527,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.422190474497091,0.835606408021955,1.47726809770555,0.291480836629851,9.27126510052548,0,0.412773735926445,0,0,0.136694227721025,0.228778173206523,0,0.279902904647316,0,0.954670618015114,0.316335993581135,0.813277868507395,0.324016022465404,0.836353184057875,0.218362563746178,0.404593039154462,0.661227645802687,0,0.518459893167171,0.621339313086926,4.50954350947352,1.19613236835183,0.992750942742586,1.55560950675238,1.03327858782185,0.844780627453891,0.58678619322877,1.8228613878153,2.30690557736564,0.483168241652012,2.01621004380506,0,0.810900861160657,0.410843828659309,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.680191150845634,1.55390167361845,0.897138566094757,1.00730769818447,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0.501572104035363,1.12950368523413,2.76195141904306,2.86447756719698,1.54667864109319,5.48066015816514,5.2877572817279,2.70009000092722,4.05289082901798,4.98456649882625,6.73088405277366,0.726511433089237,0.399024873401031,0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| ||
|short_description=p3@Klc2 | |short_description=p3@Klc2 | ||
}} | }} |
Latest revision as of 22:39, 25 September 2015
Short description: | p3@Klc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Klc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 17bp_to_NM_008451, NR_045528, uc008gcg.1, uc008gch.1_5end |
EntrezGene: | Klc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.03e-11 | 39 |
electrically active cell | 3.03e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.09e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-10 | 23 |
embryonic cell | 3.19e-10 | 70 |
neuron | 3.18e-09 | 33 |
neuronal stem cell | 3.18e-09 | 33 |
neuroblast | 3.18e-09 | 33 |
electrically signaling cell | 3.18e-09 | 33 |
neural cell | 5.60e-09 | 43 |
ectodermal cell | 1.32e-08 | 44 |
neurectodermal cell | 1.32e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.36e-21 | 75 |
central nervous system | 3.19e-20 | 73 |
regional part of nervous system | 2.89e-18 | 54 |
neural tube | 2.13e-16 | 52 |
neural rod | 2.13e-16 | 52 |
future spinal cord | 2.13e-16 | 52 |
neural keel | 2.13e-16 | 52 |
ectoderm-derived structure | 2.31e-15 | 95 |
ectoderm | 2.31e-15 | 95 |
presumptive ectoderm | 2.31e-15 | 95 |
gray matter | 9.33e-14 | 34 |
brain | 2.05e-12 | 47 |
future brain | 2.05e-12 | 47 |
regional part of brain | 9.33e-12 | 46 |
neurectoderm | 3.13e-11 | 64 |
neural plate | 3.13e-11 | 64 |
presumptive neural plate | 3.13e-11 | 64 |
posterior neural tube | 1.41e-10 | 12 |
chordal neural plate | 1.41e-10 | 12 |
occipital lobe | 2.90e-10 | 10 |
visual cortex | 2.90e-10 | 10 |
neocortex | 2.90e-10 | 10 |
brain grey matter | 6.32e-10 | 29 |
regional part of telencephalon | 6.32e-10 | 29 |
telencephalon | 6.32e-10 | 29 |
ecto-epithelium | 6.57e-10 | 73 |
anterior neural tube | 1.72e-08 | 40 |
regional part of forebrain | 8.53e-08 | 39 |
forebrain | 8.53e-08 | 39 |
future forebrain | 8.53e-08 | 39 |
structure with developmental contribution from neural crest | 3.04e-07 | 92 |
spinal cord | 6.10e-07 | 6 |
dorsal region element | 6.10e-07 | 6 |
dorsum | 6.10e-07 | 6 |