FFCP PHASE1:Mm9::chr2:155207544..155207620,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:155207544..155207620,+
|short_description=p1@Trp53inp2
|description=CAGE_peak_1_at_Trp53inp2_5end
|association_with_transcript=0bp_to_ENSMUST00000043237,EN...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68728 | |EntrezGene=68728 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFU8,G3UXZ2 | |UniProt=Q8CFU8,G3UXZ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000043237,ENSMUST00000173406,ENSMUST00000174685,NM_178111,uc008nkk.1_5end | |||
|cluster_id=chr2:155207544..155207620,+ | |||
|description=CAGE_peak_1_at_Trp53inp2_5end | |||
|id=chr2:155207544..155207620,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.35e-10!43;CL:0000055!4.87e-10!50;CL:0000221!8.34e-10!44;CL:0000133!8.34e-10!44;CL:0002321!5.79e-07!70;CL:0000220!5.79e-07!70;CL:0000540!6.24e-07!33;CL:0000047!6.24e-07!33;CL:0000031!6.24e-07!33;CL:0000404!6.24e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.35e-10,43;CL:0000221,8.34e-10,44;CL:0000133,8.34e-10,44;CL:0002321,5.79e-07,70;CL:0000540,6.24e-07,33;CL:0000047,6.24e-07,33;CL:0000031,6.24e-07,33;CL:0000404,6.24e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-15!73;UBERON:0005743!2.03e-15!73;UBERON:0004121!2.73e-15!102;UBERON:0000924!2.73e-15!102;UBERON:0006601!2.73e-15!102;UBERON:0000073!4.38e-15!75;UBERON:0001016!4.38e-15!75;UBERON:0004111!1.33e-13!122;UBERON:0000025!6.66e-13!114;UBERON:0000955!5.44e-10!50;UBERON:0006238!5.44e-10!50;UBERON:0001049!9.36e-10!52;UBERON:0005068!9.36e-10!52;UBERON:0006241!9.36e-10!52;UBERON:0007135!9.36e-10!52;UBERON:0002616!1.08e-09!49;UBERON:0002346!3.07e-09!71;UBERON:0003075!3.07e-09!71;UBERON:0007284!3.07e-09!71;UBERON:0000033!2.37e-08!63;UBERON:0007100!2.82e-08!18;UBERON:0000948!2.82e-08!18;UBERON:0005498!2.82e-08!18;UBERON:0004140!2.82e-08!18;UBERON:0009881!2.82e-08!18;UBERON:0004141!2.82e-08!18;UBERON:0003084!2.82e-08!18;UBERON:0007005!2.82e-08!18;UBERON:0004139!2.82e-08!18;UBERON:0004291!2.82e-08!18;UBERON:0002020!2.00e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.05e-15,92;UBERON:0001017,2.03e-15,73;UBERON:0001016,4.38e-15,75;UBERON:0004121,9.73e-15,95;UBERON:0000924,9.73e-15,95;UBERON:0006601,9.73e-15,95;UBERON:0004111,1.33e-13,122;UBERON:0000025,6.66e-13,114;UBERON:0000073,1.42e-10,54;UBERON:0001049,9.36e-10,52;UBERON:0005068,9.36e-10,52;UBERON:0006241,9.36e-10,52;UBERON:0007135,9.36e-10,52;UBERON:0002346,7.85e-09,64;UBERON:0003075,7.85e-09,64;UBERON:0007284,7.85e-09,64;UBERON:0010371,7.95e-09,73;UBERON:0000955,1.18e-08,47;UBERON:0006238,1.18e-08,47;UBERON:0002616,2.28e-08,46;UBERON:0007100,2.82e-08,18;UBERON:0000948,2.82e-08,18;UBERON:0005498,2.82e-08,18;UBERON:0004140,2.82e-08,18;UBERON:0009881,2.82e-08,18;UBERON:0004141,2.82e-08,18;UBERON:0003084,2.82e-08,18;UBERON:0007005,2.82e-08,18;UBERON:0004139,2.82e-08,18;UBERON:0004291,2.82e-08,18;UBERON:0002020,2.00e-07,34 | |||
|phase1_expression=26.7448574665006,92.4784830244307,112.384812129215,106.467402380004,127.227515406372,65.1371575018132,61.4401244766233,25.5664180414321,17.4578015468067,16.8526458951835,1.36974374580404,0.717949430958028,9.92964233600993,15.8230928378385,4.99664642723494,2.42970320867791,4.19737126876888,12.9339487796877,9.87223921961319,15.7024171165271,106.729329139593,4.26951090163807,2.35079810225042,49.2776662203693,38.9995777814189,76.9470831914127,61.5989654507477,54.5142218695299,50.7362529948518,34.2760976473506,37.2507257900912,5.08024538767705,4.30545351309199,0,6.06588401477677,7.81302833184914,8.77928231928187,296.738926192468,137.515020636189,144.492553336768,313.527383120531,250.67769297975,274.313349462602,51.8694890059378,46.2278806360986,77.4567294122296,224.546315827887,381.762048822162,363.580632425551,354.251276113344,175.123013453328,297.567808235491,51.3414774536673,19.5847778343063,14.7881271622684,144.579803052202,148.997388768153,159.858348606007,171.362042348079,140.711600486361,150.851874034471,154.174262091455,137.840693397227,146.233704058227,179.973677987189,160.568505977819,432.622559588576,413.418896525993,126.916085465577,132.170813626725,126.405301772181,167.391476860629,136.93849539,111.344136486393,101.116971924239,138.802036778113,264.278114398533,288.701071410609,252.221927606752,185.432120548653,134.212373164735,142.730263532552,338.090611790672,163.763919519219,215.903924108633,132.58286346315,117.599008340059,161.794718976361,51.8724424332311,123.030499853847,66.6688324013859,138.528244194003,84.3164453797611,347.029152223116,349.579712586846,386.199176677903,226.396405252384,62.036637418413,60.7899250770713,57.5943506451855,37.1826628210436,85.9787398675929,81.5376767061266,63.9960032837998,64.5143302213418,74.487800449679,80.8839112023653,247.893202870079,36.5102415942512,142.356011363167,41.9834490774049,100.169142364694,128.914062966137,108.06813327623,114.178634628769,236.881524656438,84.5406789651559,365.547174293537,116.768592857383,135.398853405981,225.037507311141,134.310445118457,197.575266891209,142.877028941635,175.097446896048,79.9580582802891,11.5022519525683,8.99854096490112,8.6407754409684,184.092695828527,187.117746552818,87.8323921268922,148.619793764396,162.890746319421,239.371827332613,243.524135864704,23.3212143217224,108.109657460171,54.5881158216737,188.766344730167,33.5710742843776,43.4514977379264,62.1214347828455,47.0199031647431,67.9684626521765,70.3344324363825,88.6418314335035,201.529925805693,25.0058871802097,28.9332302656763,25.8648152521005,27.1802708210193,19.1852601965663,35.8699731517832,30.4557561883756,18.5101868141199,5.61770549850588,4.88961023517959,8.24074148247219,140.017022233999,126.878598449773,127.483939514399,176.848317482152,169.807531998009,171.545029530765,225.557926407896,285.442899089195,355.316936823297,489.894673192431,524.022545340472,789.772342595727,679.245141578094,640.208136188704,613.054920897378,132.272377646836,129.556906985519,129.854581712633,77.4840160324185,19.8358072997768,25.0815605609274,28.0931065682163,36.3030344322017,52.9259744350791,59.540620973231,94.9058123089023,58.7975268364719,60.8231205296652,70.6295475746085,82.4698088513878,88.9831214567679,97.6943985433618,96.7826588016225,25.7948345296191,31.7610865055046,33.8123207019241,38.897403618455,45.9667394587273,54.4253962348872,104.972651626267,166.061416477052,194.992419978987,158.31856131167,253.170543532425,10.5112416601139,6.6830058338489,6.52100125916076,12.1716072833102,15.1941610644023,23.9348300674535,70.1978575379978,88.3636985923943,77.7008799322271,264.533500010332,99.3616330274904,138.856764535979,164.934007299464,182.98536179235,173.197224169449,133.022296919955,29.1816774126547,26.5632911600502,28.6869194960068,23.4690248288502,42.3790831327794,79.5065760559286,106.933239026074,95.2116270401394,107.631839169305,141.595834567849,152.392882685636,171.303502010968,178.496938289585,132.69632986656,133.256892535584,157.856331639111,67.05262935205,310.825942216365,425.361210643105,23.7705670796179,582.450429060489,122.732697352924,125.330836919221,193.881057959519,107.296990280696,139.471969975579,157.956704180168,127.920181729267,173.015467883497,173.136046740577,170.300297703558,107.306704417451,22.6143316657414,21.3381916753185,67.6377504187395,140.709846640361,24.2780636154981,21.7672961014621,22.255399411196,52.8590388256583,47.0375776354209,53.2362283926536,33.808636841408,42.4231880277818,90.7025495275792,197.132798035248,190.800755009146,97.3657272455834,45.0152735078276,58.9875598049361,71.3742326655202,94.8770249986164,78.6606485625131,71.7433729825247,113.86989096886,72.0442143755591,60.3721401961888,111.587369415811,254.254602035762,70.8828833195025,154.943904140432,113.881216178992,182.524680516508,76.076498360391,469.126014086589,17.9414424837745,16.9237231729842,14.4451731348375,8.85331747922048,11.072232445403,13.2691340459783,23.9669586291336,21.4125722055197,22.1119958087078,257.761066864081,21.0363435731455,23.5850581867144,38.017879969274,85.7262013659322,76.208534747416,87.6618251501335,117.615867497153,199.458027791831,150.094139071896,159.062864150253,76.6622396610499,32.4450904915434,32.264405639134,49.3906018393881,50.6306508032706,43.2527681256392,36.4981012188295,44.1392864620991,52.5345315572811,34.7881133989449,119.532452597014,31.2851009421896,14.5962155008918,16.639175060702,11.6928740680016,16.4704560014083,28.6101150885021,17.9091219784754,16.8366060979018,16.8613971413407,12.421709484765,19.6611061016839,26.4110856804729,21.7438762107145,29.4529793497554,445.07174303666,23.7524970110249,45.4849253010042,44.4894233364808,153.585727255591,119.178371911501,97.9861189829868,330.34167216084,77.242104021446,250.18506627936,219.114812577416,236.032951537031,330.473669646911,124.685018598257,129.172356453639,120.154005041261,113.480943212504,102.41018443043,120.120392326422,56.7716791285446,87.7854721482268,49.8542128802072,44.7316359405661,51.5648380064836,82.3618917856063,87.787457481638,95.394231501608,95.9548436679528,100.068095858464,84.6620861633401,93.5586653274938,92.7050923951836,98.2786089414743,104.87716631295,113.357898525372,96.0681062082852,89.7027875156228,104.257732903237,91.8521261638639,75.4312355247914,81.2839192209766,80.1145598222998,95.3472493108075,91.8507552853627,91.3837765230106,83.5980836028571,78.1317042970393,83.7911382428967,90.3439057368959,95.1452845355877,93.0867358449075,91.2585226268407,105.666925688829,76.5839245595131,99.6744205972404,90.9993956852639,137.732345644959,134.475697444397,163.237650148441,214.014012277649 | |phase1_expression=26.7448574665006,92.4784830244307,112.384812129215,106.467402380004,127.227515406372,65.1371575018132,61.4401244766233,25.5664180414321,17.4578015468067,16.8526458951835,1.36974374580404,0.717949430958028,9.92964233600993,15.8230928378385,4.99664642723494,2.42970320867791,4.19737126876888,12.9339487796877,9.87223921961319,15.7024171165271,106.729329139593,4.26951090163807,2.35079810225042,49.2776662203693,38.9995777814189,76.9470831914127,61.5989654507477,54.5142218695299,50.7362529948518,34.2760976473506,37.2507257900912,5.08024538767705,4.30545351309199,0,6.06588401477677,7.81302833184914,8.77928231928187,296.738926192468,137.515020636189,144.492553336768,313.527383120531,250.67769297975,274.313349462602,51.8694890059378,46.2278806360986,77.4567294122296,224.546315827887,381.762048822162,363.580632425551,354.251276113344,175.123013453328,297.567808235491,51.3414774536673,19.5847778343063,14.7881271622684,144.579803052202,148.997388768153,159.858348606007,171.362042348079,140.711600486361,150.851874034471,154.174262091455,137.840693397227,146.233704058227,179.973677987189,160.568505977819,432.622559588576,413.418896525993,126.916085465577,132.170813626725,126.405301772181,167.391476860629,136.93849539,111.344136486393,101.116971924239,138.802036778113,264.278114398533,288.701071410609,252.221927606752,185.432120548653,134.212373164735,142.730263532552,338.090611790672,163.763919519219,215.903924108633,132.58286346315,117.599008340059,161.794718976361,51.8724424332311,123.030499853847,66.6688324013859,138.528244194003,84.3164453797611,347.029152223116,349.579712586846,386.199176677903,226.396405252384,62.036637418413,60.7899250770713,57.5943506451855,37.1826628210436,85.9787398675929,81.5376767061266,63.9960032837998,64.5143302213418,74.487800449679,80.8839112023653,247.893202870079,36.5102415942512,142.356011363167,41.9834490774049,100.169142364694,128.914062966137,108.06813327623,114.178634628769,236.881524656438,84.5406789651559,365.547174293537,116.768592857383,135.398853405981,225.037507311141,134.310445118457,197.575266891209,142.877028941635,175.097446896048,79.9580582802891,11.5022519525683,8.99854096490112,8.6407754409684,184.092695828527,187.117746552818,87.8323921268922,148.619793764396,162.890746319421,239.371827332613,243.524135864704,23.3212143217224,108.109657460171,54.5881158216737,188.766344730167,33.5710742843776,43.4514977379264,62.1214347828455,47.0199031647431,67.9684626521765,70.3344324363825,88.6418314335035,201.529925805693,25.0058871802097,28.9332302656763,25.8648152521005,27.1802708210193,19.1852601965663,35.8699731517832,30.4557561883756,18.5101868141199,5.61770549850588,4.88961023517959,8.24074148247219,140.017022233999,126.878598449773,127.483939514399,176.848317482152,169.807531998009,171.545029530765,225.557926407896,285.442899089195,355.316936823297,489.894673192431,524.022545340472,789.772342595727,679.245141578094,640.208136188704,613.054920897378,132.272377646836,129.556906985519,129.854581712633,77.4840160324185,19.8358072997768,25.0815605609274,28.0931065682163,36.3030344322017,52.9259744350791,59.540620973231,94.9058123089023,58.7975268364719,60.8231205296652,70.6295475746085,82.4698088513878,88.9831214567679,97.6943985433618,96.7826588016225,25.7948345296191,31.7610865055046,33.8123207019241,38.897403618455,45.9667394587273,54.4253962348872,104.972651626267,166.061416477052,194.992419978987,158.31856131167,253.170543532425,10.5112416601139,6.6830058338489,6.52100125916076,12.1716072833102,15.1941610644023,23.9348300674535,70.1978575379978,88.3636985923943,77.7008799322271,264.533500010332,99.3616330274904,138.856764535979,164.934007299464,182.98536179235,173.197224169449,133.022296919955,29.1816774126547,26.5632911600502,28.6869194960068,23.4690248288502,42.3790831327794,79.5065760559286,106.933239026074,95.2116270401394,107.631839169305,141.595834567849,152.392882685636,171.303502010968,178.496938289585,132.69632986656,133.256892535584,157.856331639111,67.05262935205,310.825942216365,425.361210643105,23.7705670796179,582.450429060489,122.732697352924,125.330836919221,193.881057959519,107.296990280696,139.471969975579,157.956704180168,127.920181729267,173.015467883497,173.136046740577,170.300297703558,107.306704417451,22.6143316657414,21.3381916753185,67.6377504187395,140.709846640361,24.2780636154981,21.7672961014621,22.255399411196,52.8590388256583,47.0375776354209,53.2362283926536,33.808636841408,42.4231880277818,90.7025495275792,197.132798035248,190.800755009146,97.3657272455834,45.0152735078276,58.9875598049361,71.3742326655202,94.8770249986164,78.6606485625131,71.7433729825247,113.86989096886,72.0442143755591,60.3721401961888,111.587369415811,254.254602035762,70.8828833195025,154.943904140432,113.881216178992,182.524680516508,76.076498360391,469.126014086589,17.9414424837745,16.9237231729842,14.4451731348375,8.85331747922048,11.072232445403,13.2691340459783,23.9669586291336,21.4125722055197,22.1119958087078,257.761066864081,21.0363435731455,23.5850581867144,38.017879969274,85.7262013659322,76.208534747416,87.6618251501335,117.615867497153,199.458027791831,150.094139071896,159.062864150253,76.6622396610499,32.4450904915434,32.264405639134,49.3906018393881,50.6306508032706,43.2527681256392,36.4981012188295,44.1392864620991,52.5345315572811,34.7881133989449,119.532452597014,31.2851009421896,14.5962155008918,16.639175060702,11.6928740680016,16.4704560014083,28.6101150885021,17.9091219784754,16.8366060979018,16.8613971413407,12.421709484765,19.6611061016839,26.4110856804729,21.7438762107145,29.4529793497554,445.07174303666,23.7524970110249,45.4849253010042,44.4894233364808,153.585727255591,119.178371911501,97.9861189829868,330.34167216084,77.242104021446,250.18506627936,219.114812577416,236.032951537031,330.473669646911,124.685018598257,129.172356453639,120.154005041261,113.480943212504,102.41018443043,120.120392326422,56.7716791285446,87.7854721482268,49.8542128802072,44.7316359405661,51.5648380064836,82.3618917856063,87.787457481638,95.394231501608,95.9548436679528,100.068095858464,84.6620861633401,93.5586653274938,92.7050923951836,98.2786089414743,104.87716631295,113.357898525372,96.0681062082852,89.7027875156228,104.257732903237,91.8521261638639,75.4312355247914,81.2839192209766,80.1145598222998,95.3472493108075,91.8507552853627,91.3837765230106,83.5980836028571,78.1317042970393,83.7911382428967,90.3439057368959,95.1452845355877,93.0867358449075,91.2585226268407,105.666925688829,76.5839245595131,99.6744205972404,90.9993956852639,137.732345644959,134.475697444397,163.237650148441,214.014012277649 | ||
|short_description=p1@Trp53inp2 | |||
}} | }} |
Latest revision as of 23:33, 25 September 2015
Short description: | p1@Trp53inp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trp53inp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000043237, ENSMUST00000173406, ENSMUST00000174685, NM_178111, uc008nkk.1_5end |
EntrezGene: | Trp53inp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.35e-10 | 43 |
ectodermal cell | 8.34e-10 | 44 |
neurectodermal cell | 8.34e-10 | 44 |
embryonic cell | 5.79e-07 | 70 |
neuron | 6.24e-07 | 33 |
neuronal stem cell | 6.24e-07 | 33 |
neuroblast | 6.24e-07 | 33 |
electrically signaling cell | 6.24e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.05e-15 | 92 |
central nervous system | 2.03e-15 | 73 |
nervous system | 4.38e-15 | 75 |
ectoderm-derived structure | 9.73e-15 | 95 |
ectoderm | 9.73e-15 | 95 |
presumptive ectoderm | 9.73e-15 | 95 |
anatomical conduit | 1.33e-13 | 122 |
tube | 6.66e-13 | 114 |
regional part of nervous system | 1.42e-10 | 54 |
neural tube | 9.36e-10 | 52 |
neural rod | 9.36e-10 | 52 |
future spinal cord | 9.36e-10 | 52 |
neural keel | 9.36e-10 | 52 |
neurectoderm | 7.85e-09 | 64 |
neural plate | 7.85e-09 | 64 |
presumptive neural plate | 7.85e-09 | 64 |
ecto-epithelium | 7.95e-09 | 73 |
brain | 1.18e-08 | 47 |
future brain | 1.18e-08 | 47 |
regional part of brain | 2.28e-08 | 46 |
primary circulatory organ | 2.82e-08 | 18 |
heart | 2.82e-08 | 18 |
primitive heart tube | 2.82e-08 | 18 |
primary heart field | 2.82e-08 | 18 |
anterior lateral plate mesoderm | 2.82e-08 | 18 |
heart tube | 2.82e-08 | 18 |
heart primordium | 2.82e-08 | 18 |
cardiac mesoderm | 2.82e-08 | 18 |
cardiogenic plate | 2.82e-08 | 18 |
heart rudiment | 2.82e-08 | 18 |
gray matter | 2.00e-07 | 34 |