FFCP PHASE1:Mm9::chr2:156571561..156571577,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:156571561..156571577,+
|short_description=p16@Dlgap4
|description=CAGE_peak_16_at_Dlgap4_5end
|association_with_transcript=0bp_to_ENSMUST00000127944,ENSMUS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228836 | |EntrezGene=228836 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000127944,ENSMUST00000146412_5end | |||
|cluster_id=chr2:156571561..156571577,+ | |||
|description=CAGE_peak_16_at_Dlgap4_5end | |||
|id=chr2:156571561..156571577,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.85e-08!43;CL:0000055!7.75e-08!50;CL:0000117!1.17e-07!23;CL:0000337!1.17e-07!23;CL:0000221!1.69e-07!44;CL:0000133!1.69e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-29,23;CL:0000337,1.26e-29,23;CL:0002319,8.59e-21,43;CL:0000221,2.83e-20,44;CL:0000133,2.83e-20,44;CL:0000540,3.87e-20,33;CL:0000047,3.87e-20,33;CL:0000031,3.87e-20,33;CL:0000404,3.87e-20,33;CL:0000393,8.98e-17,39;CL:0000211,8.98e-17,39;CL:0000120,9.20e-16,3;CL:0002609,9.65e-14,6;CL:0002321,5.61e-12,70;CL:0002612,1.13e-07,3;CL:0002613,1.32e-07,3;CL:0000723,2.12e-07,91;CL:0000048,2.12e-07,91;CL:0000034,8.14e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.90e-09!34;UBERON:0000073!1.41e-07!75;UBERON:0001016!1.41e-07!75;UBERON:0001017!5.00e-07!73;UBERON:0005743!5.00e-07!73;UBERON:0000956!6.26e-07!21;UBERON:0001869!6.26e-07!21;UBERON:0000203!6.26e-07!21;UBERON:0004121!9.54e-07!102;UBERON:0000924!9.54e-07!102;UBERON:0006601!9.54e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.43e-16,34;UBERON:0001017,2.52e-15,73;UBERON:0001016,7.42e-15,75;UBERON:0001049,5.43e-12,52;UBERON:0005068,5.43e-12,52;UBERON:0006241,5.43e-12,52;UBERON:0007135,5.43e-12,52;UBERON:0000073,1.76e-11,54;UBERON:0004121,3.05e-11,95;UBERON:0000924,3.05e-11,95;UBERON:0006601,3.05e-11,95;UBERON:0003528,3.93e-10,29;UBERON:0002791,3.93e-10,29;UBERON:0001893,3.93e-10,29;UBERON:0001948,1.81e-09,5;UBERON:0002315,1.81e-09,5;UBERON:0002346,2.10e-09,64;UBERON:0003075,2.10e-09,64;UBERON:0007284,2.10e-09,64;UBERON:0000956,3.39e-08,21;UBERON:0001869,3.39e-08,21;UBERON:0000203,3.39e-08,21;UBERON:0010371,5.12e-08,73;UBERON:0002240,5.70e-08,6;UBERON:0005174,5.70e-08,6;UBERON:0001137,5.70e-08,6;UBERON:0002257,1.13e-07,3;UBERON:0002616,1.41e-07,46;UBERON:0000955,2.17e-07,47;UBERON:0006238,2.17e-07,47;UBERON:0002780,2.79e-07,39;UBERON:0001890,2.79e-07,39;UBERON:0006240,2.79e-07,39;UBERON:0003080,4.49e-07,40 | |||
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|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0.258246646883153,0.140788722151667,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,0.425216450755349,0.0992909512008853,0,0.47997726838022,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0.202753862439029,0,0,1.09012578190223,0.219686182734472,0.972149495371417,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0.515672092277442,1.01158230429799,3.70293685490423,3.80298842103708,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,2.68952813725088,1.24427534770173,4.99521971827255,1.47227472945967,0.856952953211411,1.10434270475807,0.734944795289724,1.62937300731002,0.919218786610021,0,0.127687338085188,0,1.31886287730194,2.19570344645783,0,0,0,0.15279824777681,2.35702868378934,1.42371680799103,0.931997229126503,0.530083353332288,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0,0,0,0,0.432982082022428,0.760079596425296,0,0.11418387971906,0,0.148442139064825,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0,0,0,0.502617408451458,0.173824320192276,0,0,0,0.305518091550949,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.281105173679186,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,0.308713837137853,0,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.189709611372772,0,0,0.370191491765402,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0.292255857911312,0,0.963963949265421,0,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0.540183282093931,0.258717367565509,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0.90730481304255,0,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0.887943813496259,0.448569283047378,0.503653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,1.12950368523413,0,1.71868654031819,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,0,0,0.486213434136588,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0.365855945745545,0.789209134313529,0.543216455383447,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p16@Dlgap4 | |||
}} | }} |
Latest revision as of 00:06, 26 September 2015
Short description: | p16@Dlgap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Dlgap4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000127944, ENSMUST00000146412_5end |
EntrezGene: | Dlgap4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-29 | 23 |
neural cell | 8.59e-21 | 43 |
ectodermal cell | 2.83e-20 | 44 |
neurectodermal cell | 2.83e-20 | 44 |
neuron | 3.87e-20 | 33 |
neuronal stem cell | 3.87e-20 | 33 |
neuroblast | 3.87e-20 | 33 |
electrically signaling cell | 3.87e-20 | 33 |
electrically responsive cell | 8.98e-17 | 39 |
electrically active cell | 8.98e-17 | 39 |
granule cell | 9.20e-16 | 3 |
neuron of cerebral cortex | 9.65e-14 | 6 |
embryonic cell | 5.61e-12 | 70 |
neuron of the ventral spinal cord | 1.13e-07 | 3 |
striatum neuron | 1.32e-07 | 3 |
somatic stem cell | 2.12e-07 | 91 |
multi fate stem cell | 2.12e-07 | 91 |
stem cell | 8.14e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.43e-16 | 34 |
central nervous system | 2.52e-15 | 73 |
nervous system | 7.42e-15 | 75 |
neural tube | 5.43e-12 | 52 |
neural rod | 5.43e-12 | 52 |
future spinal cord | 5.43e-12 | 52 |
neural keel | 5.43e-12 | 52 |
regional part of nervous system | 1.76e-11 | 54 |
ectoderm-derived structure | 3.05e-11 | 95 |
ectoderm | 3.05e-11 | 95 |
presumptive ectoderm | 3.05e-11 | 95 |
brain grey matter | 3.93e-10 | 29 |
regional part of telencephalon | 3.93e-10 | 29 |
telencephalon | 3.93e-10 | 29 |
regional part of spinal cord | 1.81e-09 | 5 |
gray matter of spinal cord | 1.81e-09 | 5 |
neurectoderm | 2.10e-09 | 64 |
neural plate | 2.10e-09 | 64 |
presumptive neural plate | 2.10e-09 | 64 |
cerebral cortex | 3.39e-08 | 21 |
cerebral hemisphere | 3.39e-08 | 21 |
pallium | 3.39e-08 | 21 |
ecto-epithelium | 5.12e-08 | 73 |
spinal cord | 5.70e-08 | 6 |
dorsal region element | 5.70e-08 | 6 |
dorsum | 5.70e-08 | 6 |
ventral horn of spinal cord | 1.13e-07 | 3 |
regional part of brain | 1.41e-07 | 46 |
brain | 2.17e-07 | 47 |
future brain | 2.17e-07 | 47 |
regional part of forebrain | 2.79e-07 | 39 |
forebrain | 2.79e-07 | 39 |
future forebrain | 2.79e-07 | 39 |
anterior neural tube | 4.49e-07 | 40 |