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FFCP PHASE1:Mm9::chr9:103014205..103014222,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:103014205..103014222,+
|DHSsupport=NA
|short_description=p4@Rab6b
|DPIdataset=NA
|description=CAGE_peak_4_at_Rab6b_5end
|association_with_transcript=-181bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end
|EntrezGene=270192
|EntrezGene=270192
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P61294,Q0PD53,Q0PD54
|UniProt=P61294,Q0PD53,Q0PD54
|association_with_transcript=-181bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end
|cluster_id=chr9:103014205..103014222,+
|description=CAGE_peak_4_at_Rab6b_5end
|id=chr9:103014205..103014222,+
|ontology_enrichment_celltype=CL:0000540!1.69e-11!33;CL:0000047!1.69e-11!33;CL:0000031!1.69e-11!33;CL:0000404!1.69e-11!33;CL:0000117!4.12e-11!23;CL:0000337!4.12e-11!23;CL:0000393!2.46e-08!39;CL:0000211!2.46e-08!39;CL:0000221!1.04e-07!44;CL:0000133!1.04e-07!44;CL:0002319!1.36e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23;CL:0000540,3.14e-11,33;CL:0000047,3.14e-11,33;CL:0000031,3.14e-11,33;CL:0000404,3.14e-11,33;CL:0000393,3.47e-08,39;CL:0000211,3.47e-08,39;CL:0002319,2.30e-07,43;CL:0000221,5.15e-07,44;CL:0000133,5.15e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.25e-22!102;UBERON:0000924!1.25e-22!102;UBERON:0006601!1.25e-22!102;UBERON:0000073!2.01e-21!75;UBERON:0001016!2.01e-21!75;UBERON:0002346!2.22e-21!71;UBERON:0003075!2.22e-21!71;UBERON:0007284!2.22e-21!71;UBERON:0001017!6.15e-21!73;UBERON:0005743!6.15e-21!73;UBERON:0000033!1.57e-17!63;UBERON:0001049!2.84e-17!52;UBERON:0005068!2.84e-17!52;UBERON:0006241!2.84e-17!52;UBERON:0007135!2.84e-17!52;UBERON:0000955!2.53e-16!50;UBERON:0006238!2.53e-16!50;UBERON:0003056!8.24e-16!49;UBERON:0002616!9.12e-16!49;UBERON:0002020!9.35e-15!34;UBERON:0003080!3.16e-13!40;UBERON:0002780!1.12e-12!39;UBERON:0001890!1.12e-12!39;UBERON:0006240!1.12e-12!39;UBERON:0002791!8.18e-12!29;UBERON:0003528!8.18e-12!29;UBERON:0001893!8.18e-12!29;UBERON:0007811!1.14e-11!86;UBERON:0000153!1.09e-09!94;UBERON:0002021!3.16e-08!10;UBERON:0000411!3.16e-08!10;UBERON:0001950!3.16e-08!10;UBERON:0000956!1.18e-07!21;UBERON:0001869!1.18e-07!21;UBERON:0000203!1.18e-07!21;UBERON:0002619!2.91e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.02e-23,64;UBERON:0003075,5.02e-23,64;UBERON:0007284,5.02e-23,64;UBERON:0001017,1.50e-22,73;UBERON:0001016,1.96e-22,75;UBERON:0000073,5.44e-22,54;UBERON:0004121,1.44e-21,95;UBERON:0000924,1.44e-21,95;UBERON:0006601,1.44e-21,95;UBERON:0001049,5.41e-20,52;UBERON:0005068,5.41e-20,52;UBERON:0006241,5.41e-20,52;UBERON:0007135,5.41e-20,52;UBERON:0002020,1.05e-18,34;UBERON:0010371,1.11e-18,73;UBERON:0003056,3.55e-16,49;UBERON:0000955,4.87e-16,47;UBERON:0006238,4.87e-16,47;UBERON:0002616,2.49e-15,46;UBERON:0003528,1.17e-14,29;UBERON:0002791,1.17e-14,29;UBERON:0001893,1.17e-14,29;UBERON:0003080,1.02e-13,40;UBERON:0002780,5.21e-13,39;UBERON:0001890,5.21e-13,39;UBERON:0006240,5.21e-13,39;UBERON:0010314,9.59e-13,92;UBERON:0002021,6.95e-11,10;UBERON:0000411,6.95e-11,10;UBERON:0001950,6.95e-11,10;UBERON:0002619,1.38e-09,17;UBERON:0000956,5.51e-09,21;UBERON:0001869,5.51e-09,21;UBERON:0000203,5.51e-09,21;UBERON:0002420,2.57e-07,8;UBERON:0007245,2.57e-07,8;UBERON:0010009,2.57e-07,8;UBERON:0010011,2.57e-07,8;UBERON:0000454,2.57e-07,8;UBERON:0003076,3.42e-07,12;UBERON:0003057,3.42e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,1.12630977721333,0,0.34243593645101,0,0.342401459862411,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0,0.550640256485045,0,0,0,0,0,0,0.167782606057736,0,1.68046899571232,0,0,0,7.68802551266472,12.6957835025288,17.1134478946668,0,0,0,0,0,0.898800331555214,0.384218305321555,0.622137673850866,1.08004750665353,0.420649922702764,33.1355141908412,29.3755159465646,1.34739879136449,0.862609239164127,3.67687514644008,48.450987639731,55.0332427147159,52.5334343736353,6.98997324970027,8.87430142943374,8.85552729946492,38.5272538621906,15.757353080887,28.1148775909331,30.9360014747351,22.4947255662583,13.047961207771,0.984440513331393,1.73814588245607,0.289864488701678,0,0,0,0,0,1.26399978118577,0.511290967734173,1.29893002301434,1.06001872353102,0.985903938436763,3.84979432242953,10.1922095882658,14.2213340630666,0.216491041011214,0,0,0.79928715803342,0.776813650941515,0.445326417194474,0.520455980298408,2.13125834818499,0.922461989024234,1.3565037649736,2.11659672844269,0.502666365318702,1.73036477414062,1.15679485535929,0,0,0,0.484875253135222,0,19.6163133997737,14.4518227701284,0.255457055208591,0.11981512450592,0,0,21.8694333531041,34.312545211397,3.64397621127307,42.2393098067232,28.3844157636667,45.9211578476628,23.6872244078926,0.509196819251581,0,2.52722758433675,2.10441855886474,0.390361328888111,0.689706313300419,2.52086981727489,3.46621081022145,2.58538696775046,2.8185018462667,1.40552586839593,5.17406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,23.7627641877464,2.36680608472354,0,0.528901133327089,0,0.464473343720877,0.515469845288373,0,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.775809948670503,0.561086559122548,1.20149420536089,0.590440591918409,0.941992367048249,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,1.29327233116623,0.189491411770485,0,0,0,0.335012514883631,0,0.585400943573396,0,0,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,0,0,0,0.551873492609465,28.578005017827,20.74646852682,0,0,0.315508219416257,1.56175497718655,2.80050417052639,0.477937595905104,0.222798674082394,0.566153061577665,1.21443210502468,2.92255857911312,2.76701444562566,19.6006003017302,0.709700426041343,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,3.06395645178409,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0.713475270408282,1.81003922662333,0.608929898229199,2.11204537257339,3.60114520468494,1.32317038832977,1.15420377059036,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,29.2971977176605,0.512612642393558,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0,0,0.578574190077352,1.04702376793612,0.388844919875379,0,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,1.15345278868282,0.241584120826006,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.481059208201647,0.818138315270983,0,0.443971906748129,0.0897138566094757,0.503653849092235,0.579568782096571,0.375364950902364,1.28206136987086,0.214368379079066,2.00628841614145,38.9678771405776,45.1118731777033,42.3942679945154,56.8834033557606,37.6795385873853,61.9422995859554,46.5765525159946,35.5753750547134,35.7982503097522,48.1517089929193,0.415149390336707,1.99512436700516,0.853668028770671,0.729320151204882,2.51535795153579,3.67687016900028,2.22246727801615,1.64828045791115,0.962757628775446,2.27427490587418,2.78827229879264,2.26351609663291,1.96647165686753,1.98477972455095,1.60819313075717,0.952587382566147,2.31768651889711,1.15745532278223,0.412085900803307,1.03039244094078,1.37147700954166,1.77475806159337,1.90748951957857,1.88950341622027,1.97629698872194,1.35383372626682,1.46342378298218,1.57841826862706,1.7654534799962,1.12228454331548,0.830445126869219,1.37906275325789,1.63692417267876,1.54936841185966,1.35034627686799,2.99772693525535,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,1.15933917810211
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,1.12630977721333,0,0.34243593645101,0,0.342401459862411,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0,0.550640256485045,0,0,0,0,0,0,0.167782606057736,0,1.68046899571232,0,0,0,7.68802551266472,12.6957835025288,17.1134478946668,0,0,0,0,0,0.898800331555214,0.384218305321555,0.622137673850866,1.08004750665353,0.420649922702764,33.1355141908412,29.3755159465646,1.34739879136449,0.862609239164127,3.67687514644008,48.450987639731,55.0332427147159,52.5334343736353,6.98997324970027,8.87430142943374,8.85552729946492,38.5272538621906,15.757353080887,28.1148775909331,30.9360014747351,22.4947255662583,13.047961207771,0.984440513331393,1.73814588245607,0.289864488701678,0,0,0,0,0,1.26399978118577,0.511290967734173,1.29893002301434,1.06001872353102,0.985903938436763,3.84979432242953,10.1922095882658,14.2213340630666,0.216491041011214,0,0,0.79928715803342,0.776813650941515,0.445326417194474,0.520455980298408,2.13125834818499,0.922461989024234,1.3565037649736,2.11659672844269,0.502666365318702,1.73036477414062,1.15679485535929,0,0,0,0.484875253135222,0,19.6163133997737,14.4518227701284,0.255457055208591,0.11981512450592,0,0,21.8694333531041,34.312545211397,3.64397621127307,42.2393098067232,28.3844157636667,45.9211578476628,23.6872244078926,0.509196819251581,0,2.52722758433675,2.10441855886474,0.390361328888111,0.689706313300419,2.52086981727489,3.46621081022145,2.58538696775046,2.8185018462667,1.40552586839593,5.17406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,23.7627641877464,2.36680608472354,0,0.528901133327089,0,0.464473343720877,0.515469845288373,0,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.775809948670503,0.561086559122548,1.20149420536089,0.590440591918409,0.941992367048249,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,1.29327233116623,0.189491411770485,0,0,0,0.335012514883631,0,0.585400943573396,0,0,0.478364305972461,0.327726629431476,1.03610989119537,0.867894351489069,0,0,0,0.551873492609465,28.578005017827,20.74646852682,0,0,0.315508219416257,1.56175497718655,2.80050417052639,0.477937595905104,0.222798674082394,0.566153061577665,1.21443210502468,2.92255857911312,2.76701444562566,19.6006003017302,0.709700426041343,0.35613120733451,0.162886959353576,0.824850614862677,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,3.06395645178409,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0.713475270408282,1.81003922662333,0.608929898229199,2.11204537257339,3.60114520468494,1.32317038832977,1.15420377059036,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,29.2971977176605,0.512612642393558,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0,0,0.578574190077352,1.04702376793612,0.388844919875379,0,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,1.15345278868282,0.241584120826006,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.481059208201647,0.818138315270983,0,0.443971906748129,0.0897138566094757,0.503653849092235,0.579568782096571,0.375364950902364,1.28206136987086,0.214368379079066,2.00628841614145,38.9678771405776,45.1118731777033,42.3942679945154,56.8834033557606,37.6795385873853,61.9422995859554,46.5765525159946,35.5753750547134,35.7982503097522,48.1517089929193,0.415149390336707,1.99512436700516,0.853668028770671,0.729320151204882,2.51535795153579,3.67687016900028,2.22246727801615,1.64828045791115,0.962757628775446,2.27427490587418,2.78827229879264,2.26351609663291,1.96647165686753,1.98477972455095,1.60819313075717,0.952587382566147,2.31768651889711,1.15745532278223,0.412085900803307,1.03039244094078,1.37147700954166,1.77475806159337,1.90748951957857,1.88950341622027,1.97629698872194,1.35383372626682,1.46342378298218,1.57841826862706,1.7654534799962,1.12228454331548,0.830445126869219,1.37906275325789,1.63692417267876,1.54936841185966,1.35034627686799,2.99772693525535,1.16965804222704,1.28922632428979,1.14772999241306,1.10295709559758,1.15933917810211
|short_description=p4@Rab6b
}}
}}

Latest revision as of 01:44, 26 September 2015

Short description:p4@Rab6b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rab6b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -181bp_to_ENSMUST00000035155, NM_173781, uc009rgf.1_5end
EntrezGene:Rab6b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rab6b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D752.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E438.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.49
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.87
corpus striatum, adult.CNhs10487.19-21D834.31
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D542.24
cortex, neonate N30.CNhs11107.1392-42F228.38
diencephalon, adult.CNhs10482.20-12F245.92
diencephalon, neonate N30.CNhs11201.1388-42B223.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E823.76
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C228.58
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C929.30
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A437.68
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.15
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.23e-1223
neuroblast (sensu Vertebrata)1.23e-1223
neuron3.14e-1133
neuronal stem cell3.14e-1133
neuroblast3.14e-1133
electrically signaling cell3.14e-1133
electrically responsive cell3.47e-0839
electrically active cell3.47e-0839
neural cell2.30e-0743
ectodermal cell5.15e-0744
neurectodermal cell5.15e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm5.02e-2364
neural plate5.02e-2364
presumptive neural plate5.02e-2364
central nervous system1.50e-2273
nervous system1.96e-2275
regional part of nervous system5.44e-2254
ectoderm-derived structure1.44e-2195
ectoderm1.44e-2195
presumptive ectoderm1.44e-2195
neural tube5.41e-2052
neural rod5.41e-2052
future spinal cord5.41e-2052
neural keel5.41e-2052
gray matter1.05e-1834
ecto-epithelium1.11e-1873
pre-chordal neural plate3.55e-1649
brain4.87e-1647
future brain4.87e-1647
regional part of brain2.49e-1546
brain grey matter1.17e-1429
regional part of telencephalon1.17e-1429
telencephalon1.17e-1429
anterior neural tube1.02e-1340
regional part of forebrain5.21e-1339
forebrain5.21e-1339
future forebrain5.21e-1339
structure with developmental contribution from neural crest9.59e-1392
occipital lobe6.95e-1110
visual cortex6.95e-1110
neocortex6.95e-1110
regional part of cerebral cortex1.38e-0917
cerebral cortex5.51e-0921
cerebral hemisphere5.51e-0921
pallium5.51e-0921
basal ganglion2.57e-078
nuclear complex of neuraxis2.57e-078
aggregate regional part of brain2.57e-078
collection of basal ganglia2.57e-078
cerebral subcortex2.57e-078
posterior neural tube3.42e-0712
chordal neural plate3.42e-0712
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