Personal tools

FFCP PHASE1:Mm9::chr17:25922269..25922288,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68977
|EntrezGene=68977
|HGNC=
|HGNC=
|MCL_coexpression_id=607
|TSSclassifier=NA
|UniProt=Q9DB32
|UniProt=Q9DB32
|association_with_transcript=0bp_to_ENSMUST00000129917,ENSMUST00000150324,NM_026897,uc008bbr.1_5end
|association_with_transcript=0bp_to_ENSMUST00000129917,ENSMUST00000150324,NM_026897,uc008bbr.1_5end
|cluster_id=chr17:25922269..25922288,-
|description=CAGE_peak_2_at_Haghl_5end
|description=CAGE_peak_2_at_Haghl_5end
|id=chr17:25922269..25922288,-
|id=chr17:25922269..25922288,-
|ontology_enrichment_celltype=CL:0000221!1.29e-10!44;CL:0000133!1.29e-10!44;CL:0000055!2.81e-10!50;CL:0002319!3.71e-10!43;CL:0002321!1.24e-07!70;CL:0000220!1.24e-07!70;CL:0000393!2.92e-07!39;CL:0000211!2.92e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,5.71e-11,44;CL:0000133,5.71e-11,44;CL:0002319,3.54e-10,43;CL:0002453,2.26e-09,8;CL:0002321,4.44e-08,70;CL:0000117,7.29e-08,23;CL:0000337,7.29e-08,23;CL:0000333,3.25e-07,10;CL:0000095,3.25e-07,10;CL:0000243,3.25e-07,10;CL:0000123,3.25e-07,10;CL:0000125,3.25e-07,10;CL:0000030,3.25e-07,10;CL:0000339,3.25e-07,10;CL:0000128,5.08e-07,6;CL:0000126,5.08e-07,6;CL:0000127,5.08e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.30e-21!73;UBERON:0005743!1.30e-21!73;UBERON:0000073!1.97e-21!75;UBERON:0001016!1.97e-21!75;UBERON:0004121!2.51e-17!102;UBERON:0000924!2.51e-17!102;UBERON:0006601!2.51e-17!102;UBERON:0001049!5.62e-16!52;UBERON:0005068!5.62e-16!52;UBERON:0006241!5.62e-16!52;UBERON:0007135!5.62e-16!52;UBERON:0002346!9.35e-16!71;UBERON:0003075!9.35e-16!71;UBERON:0007284!9.35e-16!71;UBERON:0000955!1.54e-14!50;UBERON:0006238!1.54e-14!50;UBERON:0002616!5.16e-14!49;UBERON:0000033!1.65e-13!63;UBERON:0002020!7.10e-10!34;UBERON:0003080!3.91e-09!40;UBERON:0003056!8.45e-09!49;UBERON:0003076!9.09e-09!12;UBERON:0003057!9.09e-09!12;UBERON:0002780!1.18e-08!39;UBERON:0001890!1.18e-08!39;UBERON:0006240!1.18e-08!39;UBERON:0002791!4.31e-07!29;UBERON:0003528!4.31e-07!29;UBERON:0001893!4.31e-07!29;UBERON:0007811!5.12e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.25e-22,73;UBERON:0001016,2.50e-21,75;UBERON:0000073,2.26e-19,54;UBERON:0001049,3.12e-17,52;UBERON:0005068,3.12e-17,52;UBERON:0006241,3.12e-17,52;UBERON:0007135,3.12e-17,52;UBERON:0004121,1.40e-16,95;UBERON:0000924,1.40e-16,95;UBERON:0006601,1.40e-16,95;UBERON:0003076,7.32e-16,12;UBERON:0003057,7.32e-16,12;UBERON:0010314,2.90e-14,92;UBERON:0002346,1.79e-13,64;UBERON:0003075,1.79e-13,64;UBERON:0007284,1.79e-13,64;UBERON:0010371,8.67e-13,73;UBERON:0000955,8.48e-12,47;UBERON:0006238,8.48e-12,47;UBERON:0002616,5.88e-11,46;UBERON:0002240,2.76e-10,6;UBERON:0005174,2.76e-10,6;UBERON:0001137,2.76e-10,6;UBERON:0002020,1.48e-09,34;UBERON:0001948,9.17e-09,5;UBERON:0002315,9.17e-09,5;UBERON:0004733,3.01e-07,6;UBERON:0004732,3.01e-07,6;UBERON:0002028,3.01e-07,6;UBERON:0007277,3.01e-07,6;UBERON:0002950,3.05e-07,4;UBERON:0001891,3.05e-07,4;UBERON:0009616,3.05e-07,4;UBERON:0010286,3.05e-07,4;UBERON:0004111,4.35e-07,122;UBERON:0000025,6.63e-07,114;UBERON:0003080,7.06e-07,40
|phase1_expression=1.60148847104794,0.697950815278722,1.36499771816861,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.595303031057488,0.496454756004426,0.522399578277871,1.27993938234725,0.91763712426868,0.57423196411502,3.01533397311352,1.939241094173,0,0,2.88249663851896,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0.734187008646726,0.782391344348039,2.39827672018491,7.0299578475031,5.05517737593137,2.09979632438044,5.75010257459886,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0.606949382578793,1.05798195854407,0,2.37191172448392,1.77858959222228,1.3498495759221,0.988866362566974,0,2.09720077362883,2.68952813725088,0.103689612308478,0.540023753326763,0.210324961351382,5.99867067247988,7.73039893330647,0.244981598429908,0.287536413054709,0,3.30347642998166,3.19218345212969,3.68655679814984,0.395658863190582,0.548925861614458,0.52091337055676,6.14202597803038,3.93933827022176,4.73674568108111,5.00868595305235,4.27115042397309,2.05039390407831,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.83096445709685,1.28326477414318,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.11418387971906,0,0.445326417194474,1.21439728736295,0.304465478312141,0.461230994512117,0.904335843315735,0.23517741427141,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,4.09893115816166,6.0739544975902,0,0.11981512450592,0.599902730993408,0.254140454146129,2.39665023047716,2.28750301409313,0.125654352112864,1.21677024134594,3.06858548796397,2.70124457927428,2.59586020908412,0.305518091550949,0.124406970610093,0,0,1.17108398666433,0.229902104433473,0.360124259610698,0.30140963567143,0.408218994907967,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0,0,0.796137067273973,0.702213187313235,0,0.284163499395593,0.621377317606506,0.938104239924385,0.36012412292203,1.18372367792605,0.590292695242212,0.462801338662135,2.09280550275367,1.60964040839772,0.700592054203017,1.15191894939436,1.47750717671186,0.324275238183423,0.730999937126662,0.219550115291051,0.134206418760372,0.841159794256509,0.617427674275707,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0,0,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.398282546508734,0.379335801906163,0.913988100877831,0,0.610953983535943,0.387904974335251,0.210407459670956,0.252946148497029,0.295220295959204,0,0.987177311374404,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.502518772325447,0.238043640886014,0,0.315270288212382,0.664394068946325,0,0,0.345369963731791,0,0,1.08781136763742,0.491764273019036,0,4.33486592967038,6.32943107597897,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,2.24924921495265,0.141940085208269,0.35613120733451,0.651547837414304,0,0,0,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,1.05418608574999,0,0,1.44048875225048,0.776152102696527,0.214337035031592,0.532020700926821,0.535106452806212,1.31639216481697,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,5.7481843623258,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0.509935289981566,0.559805809294632,0.829199842826543,3.81868247206045,0.790839983952838,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,2.35580347785627,0,0,0.56369293868419,0.149516546043979,0.330916980914195,0.388902376688095,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.810900861160657,0.410843828659309,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.443971906748129,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,0,2.82375921308533,0.920650473014354,1.71868654031819,0.68741272937475,0.685082519770642,3.0215755895588,0.675022500231806,0.900642406448441,1.35942722695261,1.55328093525546,0.415149390336707,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.187283014939765,0.704276676453562,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,1.1921809497366,0.145346416632329,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=1.60148847104794,0.697950815278722,1.36499771816861,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.595303031057488,0.496454756004426,0.522399578277871,1.27993938234725,0.91763712426868,0.57423196411502,3.01533397311352,1.939241094173,0,0,2.88249663851896,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0.734187008646726,0.782391344348039,2.39827672018491,7.0299578475031,5.05517737593137,2.09979632438044,5.75010257459886,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0.606949382578793,1.05798195854407,0,2.37191172448392,1.77858959222228,1.3498495759221,0.988866362566974,0,2.09720077362883,2.68952813725088,0.103689612308478,0.540023753326763,0.210324961351382,5.99867067247988,7.73039893330647,0.244981598429908,0.287536413054709,0,3.30347642998166,3.19218345212969,3.68655679814984,0.395658863190582,0.548925861614458,0.52091337055676,6.14202597803038,3.93933827022176,4.73674568108111,5.00868595305235,4.27115042397309,2.05039390407831,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.83096445709685,1.28326477414318,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.11418387971906,0,0.445326417194474,1.21439728736295,0.304465478312141,0.461230994512117,0.904335843315735,0.23517741427141,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,4.09893115816166,6.0739544975902,0,0.11981512450592,0.599902730993408,0.254140454146129,2.39665023047716,2.28750301409313,0.125654352112864,1.21677024134594,3.06858548796397,2.70124457927428,2.59586020908412,0.305518091550949,0.124406970610093,0,0,1.17108398666433,0.229902104433473,0.360124259610698,0.30140963567143,0.408218994907967,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0,0,0.796137067273973,0.702213187313235,0,0.284163499395593,0.621377317606506,0.938104239924385,0.36012412292203,1.18372367792605,0.590292695242212,0.462801338662135,2.09280550275367,1.60964040839772,0.700592054203017,1.15191894939436,1.47750717671186,0.324275238183423,0.730999937126662,0.219550115291051,0.134206418760372,0.841159794256509,0.617427674275707,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0,0,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.398282546508734,0.379335801906163,0.913988100877831,0,0.610953983535943,0.387904974335251,0.210407459670956,0.252946148497029,0.295220295959204,0,0.987177311374404,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.502518772325447,0.238043640886014,0,0.315270288212382,0.664394068946325,0,0,0.345369963731791,0,0,1.08781136763742,0.491764273019036,0,4.33486592967038,6.32943107597897,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,2.24924921495265,0.141940085208269,0.35613120733451,0.651547837414304,0,0,0,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,1.05418608574999,0,0,1.44048875225048,0.776152102696527,0.214337035031592,0.532020700926821,0.535106452806212,1.31639216481697,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,5.7481843623258,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0.509935289981566,0.559805809294632,0.829199842826543,3.81868247206045,0.790839983952838,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,2.35580347785627,0,0,0.56369293868419,0.149516546043979,0.330916980914195,0.388902376688095,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.810900861160657,0.410843828659309,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.443971906748129,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,0,2.82375921308533,0.920650473014354,1.71868654031819,0.68741272937475,0.685082519770642,3.0215755895588,0.675022500231806,0.900642406448441,1.35942722695261,1.55328093525546,0.415149390336707,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.187283014939765,0.704276676453562,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,1.1921809497366,0.145346416632329,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p2@Haghl
|short_description=p2@Haghl
}}
}}

Latest revision as of 02:29, 26 September 2015

Short description:p2@Haghl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Haghl_5end
Coexpression cluster:MCL_coexpression_mm9:607
Association with transcript: 0bp_to_ENSMUST00000129917, ENSMUST00000150324, NM_026897, uc008bbr.1_5end
EntrezGene:Haghl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Haghl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.25e-2273
nervous system2.50e-2175
regional part of nervous system2.26e-1954
neural tube3.12e-1752
neural rod3.12e-1752
future spinal cord3.12e-1752
neural keel3.12e-1752
ectoderm-derived structure1.40e-1695
ectoderm1.40e-1695
presumptive ectoderm1.40e-1695
posterior neural tube7.32e-1612
chordal neural plate7.32e-1612
structure with developmental contribution from neural crest2.90e-1492
neurectoderm1.79e-1364
neural plate1.79e-1364
presumptive neural plate1.79e-1364
ecto-epithelium8.67e-1373
brain8.48e-1247
future brain8.48e-1247
regional part of brain5.88e-1146
spinal cord2.76e-106
dorsal region element2.76e-106
dorsum2.76e-106
gray matter1.48e-0934
regional part of spinal cord9.17e-095
gray matter of spinal cord9.17e-095
segmental subdivision of hindbrain3.01e-076
segmental subdivision of nervous system3.01e-076
hindbrain3.01e-076
presumptive hindbrain3.01e-076
regional part of midbrain3.05e-074
midbrain3.05e-074
presumptive midbrain3.05e-074
midbrain neural tube3.05e-074
anatomical conduit4.35e-07122
tube6.63e-07114
anterior neural tube7.06e-0740
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:25922269..25922288,-&oldid=4227919"