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FFCP PHASE1:Mm9::chr4:110070369..110070413,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78933
|EntrezGene=78933
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q09LZ8,A2A9S7
|UniProt=Q09LZ8,A2A9S7
|association_with_transcript=0bp_to_ENSMUST00000080744,ENSMUST00000097920,NM_001048189,NM_030231,uc008udb.1,uc008udc.1,uc008udd.1,uc012din.1_5end
|association_with_transcript=0bp_to_ENSMUST00000080744,ENSMUST00000097920,NM_001048189,NM_030231,uc008udb.1,uc008udc.1,uc008udd.1,uc012din.1_5end
|cluster_id=chr4:110070369..110070413,+
|description=CAGE_peak_2_at_Agbl4_5end
|description=CAGE_peak_2_at_Agbl4_5end
|id=chr4:110070369..110070413,+
|id=chr4:110070369..110070413,+
|ontology_enrichment_celltype=CL:0000117!8.64e-11!23;CL:0000337!8.64e-11!23;CL:0000540!3.26e-08!33;CL:0000047!3.26e-08!33;CL:0000031!3.26e-08!33;CL:0000404!3.26e-08!33
|ontology_enrichment_celltype=CL:0000117!8.64e-11!23;CL:0000337!8.64e-11!23;CL:0000540!3.26e-08!33;CL:0000047!3.26e-08!33;CL:0000031!3.26e-08!33;CL:0000404!3.26e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.89e-10,23;CL:0000337,5.89e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.79e-25!71;UBERON:0003075!9.79e-25!71;UBERON:0007284!9.79e-25!71;UBERON:0001017!2.27e-24!73;UBERON:0005743!2.27e-24!73;UBERON:0000033!5.15e-24!63;UBERON:0003056!3.35e-23!49;UBERON:0001049!6.66e-23!52;UBERON:0005068!6.66e-23!52;UBERON:0006241!6.66e-23!52;UBERON:0007135!6.66e-23!52;UBERON:0000073!7.12e-23!75;UBERON:0001016!7.12e-23!75;UBERON:0000955!1.62e-22!50;UBERON:0006238!1.62e-22!50;UBERON:0002616!7.11e-22!49;UBERON:0003080!1.32e-20!40;UBERON:0004121!3.80e-20!102;UBERON:0000924!3.80e-20!102;UBERON:0006601!3.80e-20!102;UBERON:0002780!6.96e-20!39;UBERON:0001890!6.96e-20!39;UBERON:0006240!6.96e-20!39;UBERON:0002020!6.29e-17!34;UBERON:0002791!9.05e-15!29;UBERON:0003528!9.05e-15!29;UBERON:0001893!9.05e-15!29;UBERON:0007811!3.42e-11!86;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0000153!4.71e-10!94;UBERON:0000025!2.25e-09!114;UBERON:0002619!1.23e-08!17;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0004111!5.08e-08!122
|ontology_enrichment_uberon=UBERON:0002346!9.79e-25!71;UBERON:0003075!9.79e-25!71;UBERON:0007284!9.79e-25!71;UBERON:0001017!2.27e-24!73;UBERON:0005743!2.27e-24!73;UBERON:0000033!5.15e-24!63;UBERON:0003056!3.35e-23!49;UBERON:0001049!6.66e-23!52;UBERON:0005068!6.66e-23!52;UBERON:0006241!6.66e-23!52;UBERON:0007135!6.66e-23!52;UBERON:0000073!7.12e-23!75;UBERON:0001016!7.12e-23!75;UBERON:0000955!1.62e-22!50;UBERON:0006238!1.62e-22!50;UBERON:0002616!7.11e-22!49;UBERON:0003080!1.32e-20!40;UBERON:0004121!3.80e-20!102;UBERON:0000924!3.80e-20!102;UBERON:0006601!3.80e-20!102;UBERON:0002780!6.96e-20!39;UBERON:0001890!6.96e-20!39;UBERON:0006240!6.96e-20!39;UBERON:0002020!6.29e-17!34;UBERON:0002791!9.05e-15!29;UBERON:0003528!9.05e-15!29;UBERON:0001893!9.05e-15!29;UBERON:0007811!3.42e-11!86;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0000153!4.71e-10!94;UBERON:0000025!2.25e-09!114;UBERON:0002619!1.23e-08!17;UBERON:0002021!1.25e-08!10;UBERON:0000411!1.25e-08!10;UBERON:0001950!1.25e-08!10;UBERON:0004111!5.08e-08!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.23e-29,54;UBERON:0002346,3.94e-28,64;UBERON:0003075,3.94e-28,64;UBERON:0007284,3.94e-28,64;UBERON:0003056,8.86e-28,49;UBERON:0001049,5.11e-27,52;UBERON:0005068,5.11e-27,52;UBERON:0006241,5.11e-27,52;UBERON:0007135,5.11e-27,52;UBERON:0003080,6.33e-25,40;UBERON:0000955,1.13e-24,47;UBERON:0006238,1.13e-24,47;UBERON:0001017,4.48e-24,73;UBERON:0002780,8.29e-24,39;UBERON:0001890,8.29e-24,39;UBERON:0006240,8.29e-24,39;UBERON:0002616,1.06e-23,46;UBERON:0001016,4.86e-23,75;UBERON:0010371,7.41e-23,73;UBERON:0004121,1.27e-21,95;UBERON:0000924,1.27e-21,95;UBERON:0006601,1.27e-21,95;UBERON:0002020,2.87e-20,34;UBERON:0003528,4.45e-18,29;UBERON:0002791,4.45e-18,29;UBERON:0001893,4.45e-18,29;UBERON:0010314,4.30e-16,92;UBERON:0002021,2.56e-13,10;UBERON:0000411,2.56e-13,10;UBERON:0001950,2.56e-13,10;UBERON:0000956,3.45e-11,21;UBERON:0001869,3.45e-11,21;UBERON:0000203,3.45e-11,21;UBERON:0002619,1.35e-09,17;UBERON:0000025,1.05e-08,114;UBERON:0002420,1.85e-08,8;UBERON:0007245,1.85e-08,8;UBERON:0010009,1.85e-08,8;UBERON:0010011,1.85e-08,8;UBERON:0000454,1.85e-08,8;UBERON:0004111,2.32e-07,122
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,20.4954329264078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0.768436610643109,1.14058573539325,2.29510095163874,0.841299845405528,0.856952953211411,1.98781686856452,0.61245399607477,0.479227355091182,0.919218786610021,3.30347642998166,3.95830748064082,4.6081959976873,1.97829431595291,2.92760459527711,3.12548022334056,4.18774498502071,7.31591393041184,6.57032465440283,2.06240009831567,2.56269025438385,1.3047961207771,0,0,0.289864488701678,0,0,0,0,0,1.82577746171277,0,0,0,0.563373679106722,0,0,0,0,0,0,2.51204535381932,0,1.33597925158342,0.346970653532272,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,9.13722900369418,5.49000723382352,1.13088916901578,13.5582969749976,13.2972037811772,4.57133698031032,9.24775199486219,0.407357455401265,0.248813941220186,0.758168275301024,0,0.780722657776222,2.75882525320168,1.98068342785884,4.52114453507145,4.83059143974428,2.562274405697,1.49922759295566,0.258703370739016,0,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.710234206755631,0.393528463494808,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,10.5144974282064,2.36680608472354,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.442830443938806,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,1.84753190166605,0.189491411770485,0.162964976442026,0.339490171550376,1.40814148973101,2.01007508930179,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0.478364305972461,0.163863314715738,0,0.578596234326046,0,0,0,0,6.42202359951168,5.15731421005694,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,4.17717711348349,0.99358059645788,0.178065603667255,0,1.97964147567043,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,6.80879211507576,1.08036656418786,0.517434735131018,3.42939256050548,4.96552654198366,4.10248280484762,3.45552943264454,0.913394847343798,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0,0,96.9551854536807,0,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.469428954583016,0.39061315453185,1.99232754408851,34.0633610364669,67.6870514705984,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,11.9684561491866,13.7494923225455,13.0608418581203,12.3314853558716,8.3093328712867,9.45031500324528,10.8077088773813,13.1411298605419,11.9084871702919,0,0.798049746802062,1.19513524027894,1.45864030240976,0.209613162627982,0,0.666740183404846,1.85431551515005,0.64183841918363,0.252697211763798,1.2673964994512,0.565879024158229,1.12369808963859,1.08842759088278,1.32101578597911,1.42888107384922,1.15884325944855,0.578727661391115,0.412085900803307,1.61918812147837,1.02860775715625,1.24233064311536,0.476872379894642,0.436039249896986,0.752875043322645,1.01537529470012,1.09756783723664,0.526139422875686,1.08643291076689,1.68342681497322,0.711810108745045,0.788035859004508,0.409231043169689,1.23949472948773,0.192906610981141,2.24829520144151,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,20.4954329264078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0.768436610643109,1.14058573539325,2.29510095163874,0.841299845405528,0.856952953211411,1.98781686856452,0.61245399607477,0.479227355091182,0.919218786610021,3.30347642998166,3.95830748064082,4.6081959976873,1.97829431595291,2.92760459527711,3.12548022334056,4.18774498502071,7.31591393041184,6.57032465440283,2.06240009831567,2.56269025438385,1.3047961207771,0,0,0.289864488701678,0,0,0,0,0,1.82577746171277,0,0,0,0.563373679106722,0,0,0,0,0,0,2.51204535381932,0,1.33597925158342,0.346970653532272,0.304465478312141,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,9.13722900369418,5.49000723382352,1.13088916901578,13.5582969749976,13.2972037811772,4.57133698031032,9.24775199486219,0.407357455401265,0.248813941220186,0.758168275301024,0,0.780722657776222,2.75882525320168,1.98068342785884,4.52114453507145,4.83059143974428,2.562274405697,1.49922759295566,0.258703370739016,0,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.710234206755631,0.393528463494808,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0,0.146199987425332,0,0,10.5144974282064,2.36680608472354,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.442830443938806,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,1.84753190166605,0.189491411770485,0.162964976442026,0.339490171550376,1.40814148973101,2.01007508930179,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0.478364305972461,0.163863314715738,0,0.578596234326046,0,0,0,0,6.42202359951168,5.15731421005694,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,4.17717711348349,0.99358059645788,0.178065603667255,0,1.97964147567043,1.32745138339963,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,6.80879211507576,1.08036656418786,0.517434735131018,3.42939256050548,4.96552654198366,4.10248280484762,3.45552943264454,0.913394847343798,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0,0,96.9551854536807,0,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.469428954583016,0.39061315453185,1.99232754408851,34.0633610364669,67.6870514705984,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,11.9684561491866,13.7494923225455,13.0608418581203,12.3314853558716,8.3093328712867,9.45031500324528,10.8077088773813,13.1411298605419,11.9084871702919,0,0.798049746802062,1.19513524027894,1.45864030240976,0.209613162627982,0,0.666740183404846,1.85431551515005,0.64183841918363,0.252697211763798,1.2673964994512,0.565879024158229,1.12369808963859,1.08842759088278,1.32101578597911,1.42888107384922,1.15884325944855,0.578727661391115,0.412085900803307,1.61918812147837,1.02860775715625,1.24233064311536,0.476872379894642,0.436039249896986,0.752875043322645,1.01537529470012,1.09756783723664,0.526139422875686,1.08643291076689,1.68342681497322,0.711810108745045,0.788035859004508,0.409231043169689,1.23949472948773,0.192906610981141,2.24829520144151,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p2@Agbl4
|short_description=p2@Agbl4
}}
}}

Latest revision as of 03:56, 26 September 2015

Short description:p2@Agbl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Agbl4_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000080744, ENSMUST00000097920, NM_001048189, NM_030231, uc008udb.1, uc008udc.1, uc008udd.1, uc012din.1_5end
EntrezGene:Agbl4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Agbl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G596.96
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H334.06
testis, neonate N30.CNhs11130.1391-42E267.69
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.89e-1023
neuroblast (sensu Vertebrata)5.89e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.23e-2954
neurectoderm3.94e-2864
neural plate3.94e-2864
presumptive neural plate3.94e-2864
pre-chordal neural plate8.86e-2849
neural tube5.11e-2752
neural rod5.11e-2752
future spinal cord5.11e-2752
neural keel5.11e-2752
anterior neural tube6.33e-2540
brain1.13e-2447
future brain1.13e-2447
central nervous system4.48e-2473
regional part of forebrain8.29e-2439
forebrain8.29e-2439
future forebrain8.29e-2439
regional part of brain1.06e-2346
nervous system4.86e-2375
ecto-epithelium7.41e-2373
ectoderm-derived structure1.27e-2195
ectoderm1.27e-2195
presumptive ectoderm1.27e-2195
gray matter2.87e-2034
brain grey matter4.45e-1829
regional part of telencephalon4.45e-1829
telencephalon4.45e-1829
structure with developmental contribution from neural crest4.30e-1692
occipital lobe2.56e-1310
visual cortex2.56e-1310
neocortex2.56e-1310
cerebral cortex3.45e-1121
cerebral hemisphere3.45e-1121
pallium3.45e-1121
regional part of cerebral cortex1.35e-0917
tube1.05e-08114
basal ganglion1.85e-088
nuclear complex of neuraxis1.85e-088
aggregate regional part of brain1.85e-088
collection of basal ganglia1.85e-088
cerebral subcortex1.85e-088
anatomical conduit2.32e-07122
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