FFCP PHASE1:Mm9::chr9:108728357..108728405,+: Difference between revisions
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{{FFCP|EntrezGene=107934|HGNC=|MCL_coexpression_id=367|UniProt=Q91ZI0|association_with_transcript=-245bp_to_ENSMUST00000024238,NM_080437,uc009rrb.1_5end|description=CAGE_peak_1_at_Celsr3_5end|id=chr9:108728357..108728405,+|ontology_enrichment_celltype=CL:0000540!9.33e-19!33;CL:0000047!9.33e-19!33;CL:0000031!9.33e-19!33;CL:0000404!9.33e-19!33;CL:0000117!3.39e-16!23;CL:0000337!3.39e-16!23;CL:0000221!3.42e-15!44;CL:0000133!3.42e-15!44;CL:0002319!5.12e-15!43;CL:0000393!2.76e-13!39;CL:0000211!2.76e-13!39;CL:0000055!1.64e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.66e-22,33;CL:0000047,6.66e-22,33;CL:0000031,6.66e-22,33;CL:0000404,6.66e-22,33;CL:0000117,1.18e-19,23;CL:0000337,1.18e-19,23;CL:0000393,1.58e-16,39;CL:0000211,1.58e-16,39;CL:0000221,8.18e-15,44;CL:0000133,8.18e-15,44;CL:0002319,1.38e-14,43;CL:0002609,6.57e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.38e-36!73;UBERON:0005743!9.38e-36!73;UBERON:0000073!2.62e-35!75;UBERON:0001016!2.62e-35!75;UBERON:0002346!2.72e-35!71;UBERON:0003075!2.72e-35!71;UBERON:0007284!2.72e-35!71;UBERON:0004121!8.94e-35!102;UBERON:0000924!8.94e-35!102;UBERON:0006601!8.94e-35!102;UBERON:0000033!2.11e-29!63;UBERON:0001049!2.14e-28!52;UBERON:0005068!2.14e-28!52;UBERON:0006241!2.14e-28!52;UBERON:0007135!2.14e-28!52;UBERON:0000955!5.72e-27!50;UBERON:0006238!5.72e-27!50;UBERON:0003056!2.40e-26!49;UBERON:0002616!3.88e-26!49;UBERON:0003080!1.00e-22!40;UBERON:0002780!5.31e-22!39;UBERON:0001890!5.31e-22!39;UBERON:0006240!5.31e-22!39;UBERON:0002020!7.00e-20!34;UBERON:0002791!8.28e-17!29;UBERON:0003528!8.28e-17!29;UBERON:0001893!8.28e-17!29;UBERON:0007811!2.95e-15!86;UBERON:0000153!9.94e-12!94;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0002619!7.12e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-40,73;UBERON:0002346,2.38e-40,64;UBERON:0003075,2.38e-40,64;UBERON:0007284,2.38e-40,64;UBERON:0001016,1.19e-38,75;UBERON:0004121,1.03e-36,95;UBERON:0000924,1.03e-36,95;UBERON:0006601,1.03e-36,95;UBERON:0000073,1.01e-35,54;UBERON:0010371,1.04e-34,73;UBERON:0001049,2.36e-34,52;UBERON:0005068,2.36e-34,52;UBERON:0006241,2.36e-34,52;UBERON:0007135,2.36e-34,52;UBERON:0003056,1.45e-31,49;UBERON:0000955,1.74e-30,47;UBERON:0006238,1.74e-30,47;UBERON:0002616,1.78e-29,46;UBERON:0010314,2.25e-28,92;UBERON:0003080,4.51e-27,40;UBERON:0002780,3.51e-26,39;UBERON:0001890,3.51e-26,39;UBERON:0006240,3.51e-26,39;UBERON:0002020,1.49e-23,34;UBERON:0003528,9.23e-20,29;UBERON:0002791,9.23e-20,29;UBERON:0001893,9.23e-20,29;UBERON:0000956,2.20e-13,21;UBERON:0001869,2.20e-13,21;UBERON:0000203,2.20e-13,21;UBERON:0002619,5.04e-10,17;UBERON:0002021,1.06e-07,10;UBERON:0000411,1.06e-07,10;UBERON:0001950,1.06e-07,10;UBERON:0002420,1.22e-07,8;UBERON:0007245,1.22e-07,8;UBERON:0010009,1.22e-07,8;UBERON:0010011,1.22e-07,8;UBERON:0000454,1.22e-07,8;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12;UBERON:0001894,3.05e-07,10;UBERON:0006222,3.05e-07,10|phase1_expression=3.20297694209588,0,0,0,0,0.671517087647559,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,3.99703463710028,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,20.2316460859598,15.340738398889,26.6209189472595,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,17.1087860308988,23.4910332697142,17.2466468308133,10.8547374073445,7.95126747425809,20.0884910712525,26.0699681169603,21.1420320920305,5.50579404996943,8.2996769755372,8.44835932909339,25.4540535319274,23.2378614750121,13.5437476344758,6.97957497503452,10.6924895906019,10.0846843532695,9.72274332063103,7.40332740155335,19.3855423658313,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0.216491041011214,0,0,0.5709193985953,0,2.22663208597237,3.64319186208885,3.65358573974569,2.7673859670727,1.80867168663147,3.05730638552832,0.753999547978053,0.247194967734374,0,0,0,0,0,0,24.0080253549469,25.3430515244281,0,0,0,0,14.9790639404823,6.8625090422794,31.539242380329,12.1677024134594,11.2514801225345,9.3504620051802,15.0884374653015,0,0,0,3.15662783829711,1.04096354370163,3.44853156650209,2.16074555766419,4.82255417074288,9.86529237694254,5.76511741281824,10.026084527891,6.72628763921441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,15.5614561937454,21.3012547625119,0.330418782983798,0.264450566663544,0.426576501070468,1.16118335930219,1.28867461322093,0.80673409849337,1.11189021922435,0.380451252225118,0,0.329397909448022,0.251335208800269,0.596869416123452,1.16978452271472,0,0,0.398282546508734,0,0.685491075658373,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.90367536947505,9.02529986759964,0.327869890753351,0,1.57754109708128,2.34263246577983,4.95473814785438,0.477937595905104,2.89638276307112,4.24614796183249,4.04810701674894,7.3063964477828,6.7198922250909,22.8138134659483,0,0.178065603667255,0,0,0,0.485561272309963,0.906970670894253,0.754420319023592,1.18120757152309,0.614870295887855,2.32585463851399,0.363533729477506,1.42598951353889,0,0,0,17.0219802876894,2.34079422240703,3.10460841078611,4.50107773566344,7.98031051390231,7.13475270408282,9.05019613311665,9.43841342255258,0,0,0.441056796109924,0,0,0,0,0,0.582961673259701,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.972048067396211,0.627264888043406,0,0.269728692769641,0.826534557253359,0.26175594198403,0.388844919875379,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,9.03602948187307,8.28585425712918,8.02053718815155,7.38968684077857,7.53590771747707,6.0431511791176,7.42524750254986,11.2580300806055,7.25027854374727,10.8729665467882,1.3492355185943,7.98049746802062,5.80494259564056,3.40349403895612,1.67690530102386,1.65459157605013,2.22246727801615,2.06035057238894,1.60459604795908,1.76888048234658,2.5347929989024,2.82939512079114,2.52832070168682,3.07320731543373,3.27382173046996,3.33405583898152,4.05595140806994,2.12200142510076,3.29668720642645,2.79677948255355,2.40008476669791,1.77475806159337,2.14592570952589,2.32554266611726,2.07040636913727,2.5384382367503,2.74391959309159,2.10455769150274,2.30866993537965,2.80571135828869,2.96587545310435,4.33419722452479,3.27384834535751,4.02835787083512,3.08650577569826,9.49280196164194,3.50897412668113,1.50409737833809,0.57386499620653,0.220591419119515,0|short_description=p1@Celsr3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107934 | |||
|HGNC= | |||
|MCL_coexpression_id=367 | |||
|TSSclassifier=NA | |||
|UniProt=Q91ZI0 | |||
|association_with_transcript=-245bp_to_ENSMUST00000024238,NM_080437,uc009rrb.1_5end | |||
|cluster_id=chr9:108728357..108728405,+ | |||
|description=CAGE_peak_1_at_Celsr3_5end | |||
|id=chr9:108728357..108728405,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.33e-19!33;CL:0000047!9.33e-19!33;CL:0000031!9.33e-19!33;CL:0000404!9.33e-19!33;CL:0000117!3.39e-16!23;CL:0000337!3.39e-16!23;CL:0000221!3.42e-15!44;CL:0000133!3.42e-15!44;CL:0002319!5.12e-15!43;CL:0000393!2.76e-13!39;CL:0000211!2.76e-13!39;CL:0000055!1.64e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.66e-22,33;CL:0000047,6.66e-22,33;CL:0000031,6.66e-22,33;CL:0000404,6.66e-22,33;CL:0000117,1.18e-19,23;CL:0000337,1.18e-19,23;CL:0000393,1.58e-16,39;CL:0000211,1.58e-16,39;CL:0000221,8.18e-15,44;CL:0000133,8.18e-15,44;CL:0002319,1.38e-14,43;CL:0002609,6.57e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.38e-36!73;UBERON:0005743!9.38e-36!73;UBERON:0000073!2.62e-35!75;UBERON:0001016!2.62e-35!75;UBERON:0002346!2.72e-35!71;UBERON:0003075!2.72e-35!71;UBERON:0007284!2.72e-35!71;UBERON:0004121!8.94e-35!102;UBERON:0000924!8.94e-35!102;UBERON:0006601!8.94e-35!102;UBERON:0000033!2.11e-29!63;UBERON:0001049!2.14e-28!52;UBERON:0005068!2.14e-28!52;UBERON:0006241!2.14e-28!52;UBERON:0007135!2.14e-28!52;UBERON:0000955!5.72e-27!50;UBERON:0006238!5.72e-27!50;UBERON:0003056!2.40e-26!49;UBERON:0002616!3.88e-26!49;UBERON:0003080!1.00e-22!40;UBERON:0002780!5.31e-22!39;UBERON:0001890!5.31e-22!39;UBERON:0006240!5.31e-22!39;UBERON:0002020!7.00e-20!34;UBERON:0002791!8.28e-17!29;UBERON:0003528!8.28e-17!29;UBERON:0001893!8.28e-17!29;UBERON:0007811!2.95e-15!86;UBERON:0000153!9.94e-12!94;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0002619!7.12e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-40,73;UBERON:0002346,2.38e-40,64;UBERON:0003075,2.38e-40,64;UBERON:0007284,2.38e-40,64;UBERON:0001016,1.19e-38,75;UBERON:0004121,1.03e-36,95;UBERON:0000924,1.03e-36,95;UBERON:0006601,1.03e-36,95;UBERON:0000073,1.01e-35,54;UBERON:0010371,1.04e-34,73;UBERON:0001049,2.36e-34,52;UBERON:0005068,2.36e-34,52;UBERON:0006241,2.36e-34,52;UBERON:0007135,2.36e-34,52;UBERON:0003056,1.45e-31,49;UBERON:0000955,1.74e-30,47;UBERON:0006238,1.74e-30,47;UBERON:0002616,1.78e-29,46;UBERON:0010314,2.25e-28,92;UBERON:0003080,4.51e-27,40;UBERON:0002780,3.51e-26,39;UBERON:0001890,3.51e-26,39;UBERON:0006240,3.51e-26,39;UBERON:0002020,1.49e-23,34;UBERON:0003528,9.23e-20,29;UBERON:0002791,9.23e-20,29;UBERON:0001893,9.23e-20,29;UBERON:0000956,2.20e-13,21;UBERON:0001869,2.20e-13,21;UBERON:0000203,2.20e-13,21;UBERON:0002619,5.04e-10,17;UBERON:0002021,1.06e-07,10;UBERON:0000411,1.06e-07,10;UBERON:0001950,1.06e-07,10;UBERON:0002420,1.22e-07,8;UBERON:0007245,1.22e-07,8;UBERON:0010009,1.22e-07,8;UBERON:0010011,1.22e-07,8;UBERON:0000454,1.22e-07,8;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12;UBERON:0001894,3.05e-07,10;UBERON:0006222,3.05e-07,10 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0.671517087647559,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,3.99703463710028,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,20.2316460859598,15.340738398889,26.6209189472595,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,17.1087860308988,23.4910332697142,17.2466468308133,10.8547374073445,7.95126747425809,20.0884910712525,26.0699681169603,21.1420320920305,5.50579404996943,8.2996769755372,8.44835932909339,25.4540535319274,23.2378614750121,13.5437476344758,6.97957497503452,10.6924895906019,10.0846843532695,9.72274332063103,7.40332740155335,19.3855423658313,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0.216491041011214,0,0,0.5709193985953,0,2.22663208597237,3.64319186208885,3.65358573974569,2.7673859670727,1.80867168663147,3.05730638552832,0.753999547978053,0.247194967734374,0,0,0,0,0,0,24.0080253549469,25.3430515244281,0,0,0,0,14.9790639404823,6.8625090422794,31.539242380329,12.1677024134594,11.2514801225345,9.3504620051802,15.0884374653015,0,0,0,3.15662783829711,1.04096354370163,3.44853156650209,2.16074555766419,4.82255417074288,9.86529237694254,5.76511741281824,10.026084527891,6.72628763921441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,15.5614561937454,21.3012547625119,0.330418782983798,0.264450566663544,0.426576501070468,1.16118335930219,1.28867461322093,0.80673409849337,1.11189021922435,0.380451252225118,0,0.329397909448022,0.251335208800269,0.596869416123452,1.16978452271472,0,0,0.398282546508734,0,0.685491075658373,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,6.90367536947505,9.02529986759964,0.327869890753351,0,1.57754109708128,2.34263246577983,4.95473814785438,0.477937595905104,2.89638276307112,4.24614796183249,4.04810701674894,7.3063964477828,6.7198922250909,22.8138134659483,0,0.178065603667255,0,0,0,0.485561272309963,0.906970670894253,0.754420319023592,1.18120757152309,0.614870295887855,2.32585463851399,0.363533729477506,1.42598951353889,0,0,0,17.0219802876894,2.34079422240703,3.10460841078611,4.50107773566344,7.98031051390231,7.13475270408282,9.05019613311665,9.43841342255258,0,0,0.441056796109924,0,0,0,0,0,0.582961673259701,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.972048067396211,0.627264888043406,0,0.269728692769641,0.826534557253359,0.26175594198403,0.388844919875379,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,9.03602948187307,8.28585425712918,8.02053718815155,7.38968684077857,7.53590771747707,6.0431511791176,7.42524750254986,11.2580300806055,7.25027854374727,10.8729665467882,1.3492355185943,7.98049746802062,5.80494259564056,3.40349403895612,1.67690530102386,1.65459157605013,2.22246727801615,2.06035057238894,1.60459604795908,1.76888048234658,2.5347929989024,2.82939512079114,2.52832070168682,3.07320731543373,3.27382173046996,3.33405583898152,4.05595140806994,2.12200142510076,3.29668720642645,2.79677948255355,2.40008476669791,1.77475806159337,2.14592570952589,2.32554266611726,2.07040636913727,2.5384382367503,2.74391959309159,2.10455769150274,2.30866993537965,2.80571135828869,2.96587545310435,4.33419722452479,3.27384834535751,4.02835787083512,3.08650577569826,9.49280196164194,3.50897412668113,1.50409737833809,0.57386499620653,0.220591419119515,0 | |||
|short_description=p1@Celsr3 | |||
}} |
Latest revision as of 04:37, 26 September 2015
Short description: | p1@Celsr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Celsr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | -245bp_to_ENSMUST00000024238, NM_080437, uc009rrb.1_5end |
EntrezGene: | Celsr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.66e-22 | 33 |
neuronal stem cell | 6.66e-22 | 33 |
neuroblast | 6.66e-22 | 33 |
electrically signaling cell | 6.66e-22 | 33 |
CNS neuron (sensu Vertebrata) | 1.18e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-19 | 23 |
electrically responsive cell | 1.58e-16 | 39 |
electrically active cell | 1.58e-16 | 39 |
ectodermal cell | 8.18e-15 | 44 |
neurectodermal cell | 8.18e-15 | 44 |
neural cell | 1.38e-14 | 43 |
neuron of cerebral cortex | 6.57e-07 | 6 |