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FFCP PHASE1:Mm9::chr14:66044006..66044025,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr14:66044006..66044025,-
|DHSsupport=NA
|short_description=p1@Pnoc
|DPIdataset=NA
|description=CAGE_peak_1_at_Pnoc_5end
|association_with_transcript=20bp_to_ENSMUST00000059339,uc007uji.1,uc007ujj.1_5end
|EntrezGene=18155
|EntrezGene=18155
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q64387,Q543U6,B7ZMX9
|UniProt=Q64387,Q543U6,B7ZMX9
|association_with_transcript=20bp_to_ENSMUST00000059339,uc007uji.1,uc007ujj.1_5end
|cluster_id=chr14:66044006..66044025,-
|description=CAGE_peak_1_at_Pnoc_5end
|id=chr14:66044006..66044025,-
|ontology_enrichment_celltype=CL:0000117!2.12e-12!23;CL:0000337!2.12e-12!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.43e-13,23;CL:0000337,4.43e-13,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.43e-17!52;UBERON:0005068!2.43e-17!52;UBERON:0006241!2.43e-17!52;UBERON:0007135!2.43e-17!52;UBERON:0002346!5.36e-17!71;UBERON:0003075!5.36e-17!71;UBERON:0007284!5.36e-17!71;UBERON:0000955!1.43e-15!50;UBERON:0006238!1.43e-15!50;UBERON:0002020!4.06e-15!34;UBERON:0002616!4.62e-15!49;UBERON:0000033!2.46e-14!63;UBERON:0003056!3.76e-14!49;UBERON:0003080!9.90e-13!40;UBERON:0000073!9.91e-13!75;UBERON:0001016!9.91e-13!75;UBERON:0001017!1.02e-12!73;UBERON:0005743!1.02e-12!73;UBERON:0002780!4.25e-12!39;UBERON:0001890!4.25e-12!39;UBERON:0006240!4.25e-12!39;UBERON:0002791!1.59e-11!29;UBERON:0003528!1.59e-11!29;UBERON:0001893!1.59e-11!29;UBERON:0004121!6.66e-11!102;UBERON:0000924!6.66e-11!102;UBERON:0006601!6.66e-11!102;UBERON:0000025!2.43e-10!114;UBERON:0004111!1.45e-08!122;UBERON:0000956!5.22e-07!21;UBERON:0001869!5.22e-07!21;UBERON:0000203!5.22e-07!21;UBERON:0002619!6.31e-07!17;UBERON:0007811!6.48e-07!86;UBERON:0002021!7.59e-07!10;UBERON:0000411!7.59e-07!10;UBERON:0001950!7.59e-07!10;UBERON:0000468!9.96e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.17e-17,54;UBERON:0002346,2.00e-16,64;UBERON:0003075,2.00e-16,64;UBERON:0007284,2.00e-16,64;UBERON:0002020,3.63e-16,34;UBERON:0001049,5.86e-16,52;UBERON:0005068,5.86e-16,52;UBERON:0006241,5.86e-16,52;UBERON:0007135,5.86e-16,52;UBERON:0003056,2.98e-13,49;UBERON:0001017,3.16e-13,73;UBERON:0001016,7.01e-13,75;UBERON:0000955,4.55e-12,47;UBERON:0006238,4.55e-12,47;UBERON:0010371,4.64e-12,73;UBERON:0003528,4.89e-12,29;UBERON:0002791,4.89e-12,29;UBERON:0001893,4.89e-12,29;UBERON:0002616,1.55e-11,46;UBERON:0004121,2.03e-11,95;UBERON:0000924,2.03e-11,95;UBERON:0006601,2.03e-11,95;UBERON:0003080,3.65e-11,40;UBERON:0002780,1.72e-10,39;UBERON:0001890,1.72e-10,39;UBERON:0006240,1.72e-10,39;UBERON:0010314,7.61e-10,92;UBERON:0000025,6.62e-08,114;UBERON:0002021,8.33e-08,10;UBERON:0000411,8.33e-08,10;UBERON:0001950,8.33e-08,10;UBERON:0002619,1.02e-07,17;UBERON:0002420,4.67e-07,8;UBERON:0007245,4.67e-07,8;UBERON:0010009,4.67e-07,8;UBERON:0010011,4.67e-07,8;UBERON:0000454,4.67e-07,8;UBERON:0000956,6.71e-07,21;UBERON:0001869,6.71e-07,21;UBERON:0000203,6.71e-07,21
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,49.1628999888823,44.9642332381228,43.1005354384202,0,0,0,0,0,0,0,0.414758449233911,0.675029691658453,1.47227472945967,53.1310830991075,53.2293183693389,2.57230678351403,3.25874601462004,3.67687514644008,26.4278114398533,19.025413374693,25.8058975870489,26.6410301214992,32.7525764096627,25.0038417867245,30.4309468911505,23.0732670112989,14.3630352910202,52.7385167997865,58.7995041700295,57.7838282058432,0.605809546665472,1.20914496170857,0,1.72084775396277,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.608930956624282,1.61430848079241,1.3565037649736,6.34979018532806,0.125666591329675,1.23597483867187,1.44599356919912,0,0,0,0,0,2.04946557908083,1.67557365450764,0,0,0,0,29.5087559627501,6.40500843946077,7.16229807043327,9.56033761057521,6.90431734791892,26.3890816590641,16.5486088329113,30.1444516996936,0,1.0108910337347,0,4.81445638962004,9.42598628177239,10.803727788321,5.27466862425003,3.06164246180975,5.50888997224854,9.0890672822937,0,0,0,0,0,0,0,0,4.37875387000685,0,0,0,1.44988040774851,1.87620847984877,0.720248245844059,1.65721314909647,1.57411385397923,1.07986979021165,0.930135779001631,1.07309360559848,0.467061369468678,0.493679549740441,0.164167464079095,0,0,0.219550115291051,0.134206418760372,11.3556572224629,21.712873212029,0,0,1.06644125267617,2.78684006232526,5.28356591420583,1.81515172161008,1.55664630691409,0.951128130562796,0,0.658795818896044,0.251335208800269,0.795825888164603,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0.592905254174298,2.16898637430922,3.53806191203765,3.59779379815766,2.84004169943904,3.37648023653384,2.29163266603278,2.30156909960649,0.972811360650212,0,0,0.372140947668503,1.24815069245824,0.252578877947112,0.179397413521912,0,0,1.89491411770485,3.7481944581666,3.05541154395339,2.11221223459652,3.85264392116176,7.85544014923845,8.00047956216975,0.630540576424764,0.664394068946325,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,22.1559814183153,21.332526959781,0,0,0,0,0.215423397732799,0,0,0,0,0,0,8.67567554338879,5.67760340833074,0.534196811001766,0.488660878060728,1.64970122972535,0,0.728341908464944,1.81394134178851,0.377210159511796,2.36241514304618,2.45948118355142,1.03371317267288,0,0,0.632073515871632,1.05418608574999,0,0.340439605753788,2.70091641046965,2.06973894052407,1.92903331528433,0.709360934569094,0.891844088010353,0.493647061806363,0.608929898229199,2.11204537257339,6.35496212591461,0,0,0.161464426695906,0,0,0,0,25.0324157714188,0,0,0.555583582109135,0,0.136694227721025,0,0,0,0,3.81868247206045,3.79603192297362,3.45643094115643,2.70013352054503,3.55450103224597,1.74690050996942,2.96701562046606,3.88471241909079,3.40282724579238,0,0,0,0.149516546043979,0.827292452285488,0.972255941720238,1.03327858782185,1.01373675294467,1.17357238645754,0.651021924219751,0.314578033277133,0,0,0,0.810900861160657,0.308132871494482,0,0,0.39736270956253,0,0,0.302899349844443,0.15241361331,0.100826185136841,0.292373642219257,0.481059208201647,0.116876902181569,0,0,0,0,0.19318959403219,1.12609485270709,2.38097111547445,0.643105137237198,0.501572104035363,15.2482997506608,11.9684561491866,14.8952833494243,14.7793736815571,8.90607275701835,11.3309084608455,14.1754725048679,7.65546045481175,11.3285602246051,10.8729665467882,0.830298780673413,7.58147259461959,8.87814749921498,5.10524105843418,4.19226325255965,3.30918315210025,4.00044110042907,4.73880631649457,4.81378814387723,2.52697211763797,4.30914809813408,4.14977951049368,5.05664140337365,3.77748399188729,4.53740204749345,4.76293691283074,3.36064545240081,5.78727661391115,6.59337441285291,4.85756436443511,5.48590803816665,4.2594193478241,3.33810665926249,5.23247099876383,5.55245344450451,4.48457421825885,4.57319932181931,5.5244639401947,4.48153575691344,5.61142271657738,3.6776855618494,3.44765688314472,3.27384834535751,3.40861050609125,4.43685205256625,12.9901500527732,3.74290573512653,3.22306581072447,4.01705497344571,0.882365676478062,0.927471342481686
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,49.1628999888823,44.9642332381228,43.1005354384202,0,0,0,0,0,0,0,0.414758449233911,0.675029691658453,1.47227472945967,53.1310830991075,53.2293183693389,2.57230678351403,3.25874601462004,3.67687514644008,26.4278114398533,19.025413374693,25.8058975870489,26.6410301214992,32.7525764096627,25.0038417867245,30.4309468911505,23.0732670112989,14.3630352910202,52.7385167997865,58.7995041700295,57.7838282058432,0.605809546665472,1.20914496170857,0,1.72084775396277,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.867426633830679,0.608930956624282,1.61430848079241,1.3565037649736,6.34979018532806,0.125666591329675,1.23597483867187,1.44599356919912,0,0,0,0,0,2.04946557908083,1.67557365450764,0,0,0,0,29.5087559627501,6.40500843946077,7.16229807043327,9.56033761057521,6.90431734791892,26.3890816590641,16.5486088329113,30.1444516996936,0,1.0108910337347,0,4.81445638962004,9.42598628177239,10.803727788321,5.27466862425003,3.06164246180975,5.50888997224854,9.0890672822937,0,0,0,0,0,0,0,0,4.37875387000685,0,0,0,1.44988040774851,1.87620847984877,0.720248245844059,1.65721314909647,1.57411385397923,1.07986979021165,0.930135779001631,1.07309360559848,0.467061369468678,0.493679549740441,0.164167464079095,0,0,0.219550115291051,0.134206418760372,11.3556572224629,21.712873212029,0,0,1.06644125267617,2.78684006232526,5.28356591420583,1.81515172161008,1.55664630691409,0.951128130562796,0,0.658795818896044,0.251335208800269,0.795825888164603,0.19496408711912,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0.592905254174298,2.16898637430922,3.53806191203765,3.59779379815766,2.84004169943904,3.37648023653384,2.29163266603278,2.30156909960649,0.972811360650212,0,0,0.372140947668503,1.24815069245824,0.252578877947112,0.179397413521912,0,0,1.89491411770485,3.7481944581666,3.05541154395339,2.11221223459652,3.85264392116176,7.85544014923845,8.00047956216975,0.630540576424764,0.664394068946325,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,22.1559814183153,21.332526959781,0,0,0,0,0.215423397732799,0,0,0,0,0,0,8.67567554338879,5.67760340833074,0.534196811001766,0.488660878060728,1.64970122972535,0,0.728341908464944,1.81394134178851,0.377210159511796,2.36241514304618,2.45948118355142,1.03371317267288,0,0,0.632073515871632,1.05418608574999,0,0.340439605753788,2.70091641046965,2.06973894052407,1.92903331528433,0.709360934569094,0.891844088010353,0.493647061806363,0.608929898229199,2.11204537257339,6.35496212591461,0,0,0.161464426695906,0,0,0,0,25.0324157714188,0,0,0.555583582109135,0,0.136694227721025,0,0,0,0,3.81868247206045,3.79603192297362,3.45643094115643,2.70013352054503,3.55450103224597,1.74690050996942,2.96701562046606,3.88471241909079,3.40282724579238,0,0,0,0.149516546043979,0.827292452285488,0.972255941720238,1.03327858782185,1.01373675294467,1.17357238645754,0.651021924219751,0.314578033277133,0,0,0,0.810900861160657,0.308132871494482,0,0,0.39736270956253,0,0,0.302899349844443,0.15241361331,0.100826185136841,0.292373642219257,0.481059208201647,0.116876902181569,0,0,0,0,0.19318959403219,1.12609485270709,2.38097111547445,0.643105137237198,0.501572104035363,15.2482997506608,11.9684561491866,14.8952833494243,14.7793736815571,8.90607275701835,11.3309084608455,14.1754725048679,7.65546045481175,11.3285602246051,10.8729665467882,0.830298780673413,7.58147259461959,8.87814749921498,5.10524105843418,4.19226325255965,3.30918315210025,4.00044110042907,4.73880631649457,4.81378814387723,2.52697211763797,4.30914809813408,4.14977951049368,5.05664140337365,3.77748399188729,4.53740204749345,4.76293691283074,3.36064545240081,5.78727661391115,6.59337441285291,4.85756436443511,5.48590803816665,4.2594193478241,3.33810665926249,5.23247099876383,5.55245344450451,4.48457421825885,4.57319932181931,5.5244639401947,4.48153575691344,5.61142271657738,3.6776855618494,3.44765688314472,3.27384834535751,3.40861050609125,4.43685205256625,12.9901500527732,3.74290573512653,3.22306581072447,4.01705497344571,0.882365676478062,0.927471342481686
|short_description=p1@Pnoc
}}
}}

Latest revision as of 06:37, 26 September 2015

Short description:p1@Pnoc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pnoc_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: 20bp_to_ENSMUST00000059339, uc007uji.1, uc007ujj.1_5end
EntrezGene:Pnoc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pnoc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C349.16
Mouse Granule cells, donor2.CNhs12357.11731-123E344.96
Mouse Granule cells, donor3.CNhs12108.11636-122C743.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F153.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D553.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F432.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D652.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F658.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E157.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C16.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A429.51
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F226.39
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G89.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G121.71
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C222.16
medulla oblongata, neonate N30.CNhs11200.1396-42A321.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G36.35
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C925.03
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.43e-1323
neuroblast (sensu Vertebrata)4.43e-1323

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.17e-1754
neurectoderm2.00e-1664
neural plate2.00e-1664
presumptive neural plate2.00e-1664
gray matter3.63e-1634
neural tube5.86e-1652
neural rod5.86e-1652
future spinal cord5.86e-1652
neural keel5.86e-1652
pre-chordal neural plate2.98e-1349
central nervous system3.16e-1373
nervous system7.01e-1375
brain4.55e-1247
future brain4.55e-1247
ecto-epithelium4.64e-1273
brain grey matter4.89e-1229
regional part of telencephalon4.89e-1229
telencephalon4.89e-1229
regional part of brain1.55e-1146
ectoderm-derived structure2.03e-1195
ectoderm2.03e-1195
presumptive ectoderm2.03e-1195
anterior neural tube3.65e-1140
regional part of forebrain1.72e-1039
forebrain1.72e-1039
future forebrain1.72e-1039
structure with developmental contribution from neural crest7.61e-1092
tube6.62e-08114
occipital lobe8.33e-0810
visual cortex8.33e-0810
neocortex8.33e-0810
regional part of cerebral cortex1.02e-0717
basal ganglion4.67e-078
nuclear complex of neuraxis4.67e-078
aggregate regional part of brain4.67e-078
collection of basal ganglia4.67e-078
cerebral subcortex4.67e-078
cerebral cortex6.71e-0721
cerebral hemisphere6.71e-0721
pallium6.71e-0721
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