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FFCP PHASE1:Mm9::chr10:77927714..77927732,-: Difference between revisions

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{{FFCP|EntrezGene=216134|HGNC=|UniProt=Q8K183|association_with_transcript=0bp_to_ENSMUST00000041616_5end|description=CAGE_peak_3_at_Pdxk_5end|id=chr10:77927714..77927732,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002321,1.99e-08,70;CL:0002319,6.91e-07,43;CL:0000117,9.42e-07,23;CL:0000337,9.42e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.06e-15!73;UBERON:0005743!3.06e-15!73;UBERON:0000073!3.57e-15!75;UBERON:0001016!3.57e-15!75;UBERON:0001049!1.30e-12!52;UBERON:0005068!1.30e-12!52;UBERON:0006241!1.30e-12!52;UBERON:0007135!1.30e-12!52;UBERON:0000955!5.58e-12!50;UBERON:0006238!5.58e-12!50;UBERON:0002616!1.85e-11!49;UBERON:0004121!3.48e-10!102;UBERON:0000924!3.48e-10!102;UBERON:0006601!3.48e-10!102;UBERON:0000033!2.89e-09!63;UBERON:0002346!2.61e-08!71;UBERON:0003075!2.61e-08!71;UBERON:0007284!2.61e-08!71;UBERON:0002020!6.42e-08!34;UBERON:0003080!1.27e-07!40;UBERON:0004111!3.14e-07!122;UBERON:0002780!3.95e-07!39;UBERON:0001890!3.95e-07!39;UBERON:0006240!3.95e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-19,73;UBERON:0000073,7.34e-19,54;UBERON:0001016,1.33e-18,75;UBERON:0001049,6.20e-17,52;UBERON:0005068,6.20e-17,52;UBERON:0006241,6.20e-17,52;UBERON:0007135,6.20e-17,52;UBERON:0000955,1.13e-13,47;UBERON:0006238,1.13e-13,47;UBERON:0002346,2.87e-13,64;UBERON:0003075,2.87e-13,64;UBERON:0007284,2.87e-13,64;UBERON:0002616,5.41e-13,46;UBERON:0004121,5.57e-13,95;UBERON:0000924,5.57e-13,95;UBERON:0006601,5.57e-13,95;UBERON:0010371,2.67e-11,73;UBERON:0002020,2.42e-10,34;UBERON:0003080,4.39e-10,40;UBERON:0002780,2.08e-09,39;UBERON:0001890,2.08e-09,39;UBERON:0006240,2.08e-09,39;UBERON:0004111,4.66e-09,122;UBERON:0000025,4.90e-09,114;UBERON:0003076,1.66e-08,12;UBERON:0003057,1.66e-08,12;UBERON:0011216,3.77e-08,194;UBERON:0010314,1.86e-07,92;UBERON:0003528,2.66e-07,29;UBERON:0002791,2.66e-07,29;UBERON:0001893,2.66e-07,29;UBERON:0003056,2.77e-07,49|phase1_expression=1.28119077683835,0.697950815278722,1.36499771816861,2.41971369045464,3.00537437967808,1.00727563147134,0.467225281191051,0.258246646883153,1.12630977721333,0.234064526321993,0.68487187290202,0.717949430958028,0.342401459862411,0.786783621770977,0,0.404950534779652,0,0.473193248037357,0.274228867211478,0.42438965179803,2.12608225377674,0.397163804803541,0.261199789138935,1.27993938234725,0.68822784320151,0,0.86152399231815,0.430942465371778,1.14014051673824,1.76421090831952,0,0,0.61506478758457,0,3.75507105676657,2.1610503896604,2.6542016314108,0,0,0.523523743973798,0.588231488031014,0,0,2.64383317748712,1.72340783073175,1.65192076945513,3.12956537739216,1.30815093828268,1.5378032791413,1.55543919259427,2.79972843250725,2.87505128729943,0.503347818173209,0,1.34437519656986,1.02903774414379,0.573066879877513,1.03134418455488,2.22548106945558,1.5869729378161,0.633831403506179,1.35537812827653,6.22506357277798,5.84934816232909,5.93319817540185,3.5524005747305,2.09720077362883,4.61061966385865,0.518448061542388,0.135005938331691,0,3.99911378165325,4.8591079009355,0.244981598429908,0.575072826109418,1.83843757322004,5.50579404996943,7.02280359468532,8.44835932909339,0.263772575460388,2.19570344645783,2.08365348222704,6.42120897703176,6.75315132038016,9.32069311438542,5.00868595305235,3.84403538157578,2.05039390407831,0.605809546665472,0.982430281388212,0.289864488701678,0,2.719885334831,1.07940638327563,0,2.68816132258401,1.68533304158102,2.55645483867087,1.03914401841148,0.70667914902068,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,2.2836775943812,0.517875767294343,1.03909497345377,0.346970653532272,0,0.691846491768175,0.452167921657868,0.587943535678524,1.0053327306374,0.247194967734374,2.89198713839823,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,1.17112318804619,3.35114730901528,0.766371165625774,0.838705871541442,0,1.14363204365758,5.09288173976397,5.94750783664214,1.13088916901578,4.17178368461463,4.34716277461562,3.53239675751252,3.89379031362618,0.81471491080253,0.248813941220186,2.27450482590307,3.57751155007006,0.650602214813519,0.459804208866946,0,0.150704817835715,0.476255494059295,0.12811372028485,0.655912071918102,0.258703370739016,0.215567992932842,0.378212160335639,0.879755620819744,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0.796137067273973,0,1.28673953557358,1.42081749697796,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.822799249567402,0.32833492815819,0.648550476366846,1.02339991197733,1.09775057645525,0.536825675041487,1.68231958851302,0.720332286654991,1.32167513193519,0.793351699990633,0,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,2.37264530772256,1.81168850196412,2.01068167040216,1.98956472041151,1.36474860983384,0.898819408654221,1.72910439899755,1.39398891278057,0.569003702859245,0.342745537829186,0,0.610953983535943,0.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216134
|HGNC=
|TSSclassifier=NA
|UniProt=Q8K183
|association_with_transcript=0bp_to_ENSMUST00000041616_5end
|cluster_id=chr10:77927714..77927732,-
|description=CAGE_peak_3_at_Pdxk_5end
|id=chr10:77927714..77927732,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002321,1.99e-08,70;CL:0002319,6.91e-07,43;CL:0000117,9.42e-07,23;CL:0000337,9.42e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.06e-15!73;UBERON:0005743!3.06e-15!73;UBERON:0000073!3.57e-15!75;UBERON:0001016!3.57e-15!75;UBERON:0001049!1.30e-12!52;UBERON:0005068!1.30e-12!52;UBERON:0006241!1.30e-12!52;UBERON:0007135!1.30e-12!52;UBERON:0000955!5.58e-12!50;UBERON:0006238!5.58e-12!50;UBERON:0002616!1.85e-11!49;UBERON:0004121!3.48e-10!102;UBERON:0000924!3.48e-10!102;UBERON:0006601!3.48e-10!102;UBERON:0000033!2.89e-09!63;UBERON:0002346!2.61e-08!71;UBERON:0003075!2.61e-08!71;UBERON:0007284!2.61e-08!71;UBERON:0002020!6.42e-08!34;UBERON:0003080!1.27e-07!40;UBERON:0004111!3.14e-07!122;UBERON:0002780!3.95e-07!39;UBERON:0001890!3.95e-07!39;UBERON:0006240!3.95e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-19,73;UBERON:0000073,7.34e-19,54;UBERON:0001016,1.33e-18,75;UBERON:0001049,6.20e-17,52;UBERON:0005068,6.20e-17,52;UBERON:0006241,6.20e-17,52;UBERON:0007135,6.20e-17,52;UBERON:0000955,1.13e-13,47;UBERON:0006238,1.13e-13,47;UBERON:0002346,2.87e-13,64;UBERON:0003075,2.87e-13,64;UBERON:0007284,2.87e-13,64;UBERON:0002616,5.41e-13,46;UBERON:0004121,5.57e-13,95;UBERON:0000924,5.57e-13,95;UBERON:0006601,5.57e-13,95;UBERON:0010371,2.67e-11,73;UBERON:0002020,2.42e-10,34;UBERON:0003080,4.39e-10,40;UBERON:0002780,2.08e-09,39;UBERON:0001890,2.08e-09,39;UBERON:0006240,2.08e-09,39;UBERON:0004111,4.66e-09,122;UBERON:0000025,4.90e-09,114;UBERON:0003076,1.66e-08,12;UBERON:0003057,1.66e-08,12;UBERON:0011216,3.77e-08,194;UBERON:0010314,1.86e-07,92;UBERON:0003528,2.66e-07,29;UBERON:0002791,2.66e-07,29;UBERON:0001893,2.66e-07,29;UBERON:0003056,2.77e-07,49
|phase1_expression=1.28119077683835,0.697950815278722,1.36499771816861,2.41971369045464,3.00537437967808,1.00727563147134,0.467225281191051,0.258246646883153,1.12630977721333,0.234064526321993,0.68487187290202,0.717949430958028,0.342401459862411,0.786783621770977,0,0.404950534779652,0,0.473193248037357,0.274228867211478,0.42438965179803,2.12608225377674,0.397163804803541,0.261199789138935,1.27993938234725,0.68822784320151,0,0.86152399231815,0.430942465371778,1.14014051673824,1.76421090831952,0,0,0.61506478758457,0,3.75507105676657,2.1610503896604,2.6542016314108,0,0,0.523523743973798,0.588231488031014,0,0,2.64383317748712,1.72340783073175,1.65192076945513,3.12956537739216,1.30815093828268,1.5378032791413,1.55543919259427,2.79972843250725,2.87505128729943,0.503347818173209,0,1.34437519656986,1.02903774414379,0.573066879877513,1.03134418455488,2.22548106945558,1.5869729378161,0.633831403506179,1.35537812827653,6.22506357277798,5.84934816232909,5.93319817540185,3.5524005747305,2.09720077362883,4.61061966385865,0.518448061542388,0.135005938331691,0,3.99911378165325,4.8591079009355,0.244981598429908,0.575072826109418,1.83843757322004,5.50579404996943,7.02280359468532,8.44835932909339,0.263772575460388,2.19570344645783,2.08365348222704,6.42120897703176,6.75315132038016,9.32069311438542,5.00868595305235,3.84403538157578,2.05039390407831,0.605809546665472,0.982430281388212,0.289864488701678,0,2.719885334831,1.07940638327563,0,2.68816132258401,1.68533304158102,2.55645483867087,1.03914401841148,0.70667914902068,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,2.2836775943812,0.517875767294343,1.03909497345377,0.346970653532272,0,0.691846491768175,0.452167921657868,0.587943535678524,1.0053327306374,0.247194967734374,2.89198713839823,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,1.17112318804619,3.35114730901528,0.766371165625774,0.838705871541442,0,1.14363204365758,5.09288173976397,5.94750783664214,1.13088916901578,4.17178368461463,4.34716277461562,3.53239675751252,3.89379031362618,0.81471491080253,0.248813941220186,2.27450482590307,3.57751155007006,0.650602214813519,0.459804208866946,0,0.150704817835715,0.476255494059295,0.12811372028485,0.655912071918102,0.258703370739016,0.215567992932842,0.378212160335639,0.879755620819744,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0.796137067273973,0,1.28673953557358,1.42081749697796,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.822799249567402,0.32833492815819,0.648550476366846,1.02339991197733,1.09775057645525,0.536825675041487,1.68231958851302,0.720332286654991,1.32167513193519,0.793351699990633,0,0.232236671860439,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,2.37264530772256,1.81168850196412,2.01068167040216,1.98956472041151,1.36474860983384,0.898819408654221,1.72910439899755,1.39398891278057,0.569003702859245,0.342745537829186,0,0.610953983535943,0.387904974335251,1.19230893813542,1.45444035385792,2.80459281161244,2.19798218977925,0.493588655687202,2.66807364378434,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0.575392274901621,0.324270453550071,0.823684239564244,1.43768206527355,1.48856379067401,1.87222603868736,1.76805214562978,2.33216637578486,2.41221760681684,0.554259570499814,0.568474235311454,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0.780534591431195,0.630540576424764,0.664394068946325,0.797273843287435,0.655453258862952,1.20879487306127,0.867894351489069,7.53956419696361,3.26343410291226,4.91764273019036,0.827810238914197,3.53211297973142,3.5163505977661,2.45902418065013,0.504941854408746,1.26203287766503,1.17131623288992,0.215423397732799,0.477937595905104,0.891194696329576,0.566153061577665,0.404810701674894,0.584511715822624,0,3.85585579706168,0.567760340833074,1.06839362200353,0.651547837414304,2.3095817216155,0,0.485561272309963,0.906970670894253,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0,1.06949213515416,0.316036757935816,0,1.03135543248187,2.38307724027652,0.18006109403131,0.517434735131018,1.50035924522115,1.06404140185364,1.07021290561242,1.64549020602121,2.43571959291679,0.23467170806371,0.42366414172764,0.661585194164886,0.49465875882444,0.322928853391811,0.361877549568935,0.596861720015682,0.164140899745061,0.874442509889552,2.59595422814714,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,1.18984900995699,0.979660166265606,1.10559979043539,0,0.158167996790568,0.406638934253697,0.540026704109006,0.627264888043406,0,0.404593039154462,1.32245529160537,0.785267825952089,1.03691978633434,1.24267862617385,0,0.747582730219894,0.330916980914195,0.194451188344048,0.129159823477731,0.506868376472335,0.704143431874524,0.651021924219751,0.629156066554265,0,0.288030006257865,0,0.405450430580328,1.43795340030758,1.16928740680016,0.537080087002444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|short_description=p3@Pdxk
}}

Latest revision as of 08:36, 26 September 2015

Short description:p3@Pdxk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pdxk_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000041616_5end
EntrezGene:Pdxk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pdxk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell1.99e-0870
neural cell6.91e-0743
CNS neuron (sensu Vertebrata)9.42e-0723
neuroblast (sensu Vertebrata)9.42e-0723

Uber anatomy
Ontology termp-valuen
central nervous system1.12e-1973
regional part of nervous system7.34e-1954
nervous system1.33e-1875
neural tube6.20e-1752
neural rod6.20e-1752
future spinal cord6.20e-1752
neural keel6.20e-1752
brain1.13e-1347
future brain1.13e-1347
neurectoderm2.87e-1364
neural plate2.87e-1364
presumptive neural plate2.87e-1364
regional part of brain5.41e-1346
ectoderm-derived structure5.57e-1395
ectoderm5.57e-1395
presumptive ectoderm5.57e-1395
ecto-epithelium2.67e-1173
gray matter2.42e-1034
anterior neural tube4.39e-1040
regional part of forebrain2.08e-0939
forebrain2.08e-0939
future forebrain2.08e-0939
anatomical conduit4.66e-09122
tube4.90e-09114
posterior neural tube1.66e-0812
chordal neural plate1.66e-0812
organ system subdivision3.77e-08194
structure with developmental contribution from neural crest1.86e-0792
brain grey matter2.66e-0729
regional part of telencephalon2.66e-0729
telencephalon2.66e-0729
pre-chordal neural plate2.77e-0749
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