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FFCP PHASE1:Mm9::chr7:26082751..26082771,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18476
|EntrezGene=18476
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=D3Z2X5
|UniProt=D3Z2X5
|association_with_transcript=129bp_to_ENSMUST00000148150_5end
|association_with_transcript=129bp_to_ENSMUST00000148150_5end
|cluster_id=chr7:26082751..26082771,-
|description=CAGE_peak_7_at_Pafah1b3_5end
|description=CAGE_peak_7_at_Pafah1b3_5end
|id=chr7:26082751..26082771,-
|id=chr7:26082751..26082771,-
|ontology_enrichment_celltype=CL:0000117!4.10e-15!23;CL:0000337!4.10e-15!23;CL:0000221!5.38e-14!44;CL:0000133!5.38e-14!44;CL:0000540!7.35e-14!33;CL:0000047!7.35e-14!33;CL:0000031!7.35e-14!33;CL:0000404!7.35e-14!33;CL:0002319!7.94e-14!43;CL:0000393!1.90e-12!39;CL:0000211!1.90e-12!39;CL:0000055!4.49e-12!50;CL:0002321!1.22e-08!70;CL:0000220!1.22e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-32,23;CL:0000337,2.23e-32,23;CL:0000540,3.54e-25,33;CL:0000047,3.54e-25,33;CL:0000031,3.54e-25,33;CL:0000404,3.54e-25,33;CL:0002319,1.83e-21,43;CL:0000221,8.21e-21,44;CL:0000133,8.21e-21,44;CL:0000393,2.83e-20,39;CL:0000211,2.83e-20,39;CL:0002609,5.58e-12,6;CL:0002321,1.37e-11,70;CL:0002613,4.00e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.71e-12!73;UBERON:0005743!2.71e-12!73;UBERON:0000073!1.29e-11!75;UBERON:0001016!1.29e-11!75;UBERON:0004121!4.06e-09!102;UBERON:0000924!4.06e-09!102;UBERON:0006601!4.06e-09!102;UBERON:0001049!1.15e-07!52;UBERON:0005068!1.15e-07!52;UBERON:0006241!1.15e-07!52;UBERON:0007135!1.15e-07!52;UBERON:0002346!5.44e-07!71;UBERON:0003075!5.44e-07!71;UBERON:0007284!5.44e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-18,73;UBERON:0001016,5.93e-18,75;UBERON:0000073,1.18e-15,54;UBERON:0002020,2.72e-14,34;UBERON:0001049,1.00e-13,52;UBERON:0005068,1.00e-13,52;UBERON:0006241,1.00e-13,52;UBERON:0007135,1.00e-13,52;UBERON:0004121,2.39e-12,95;UBERON:0000924,2.39e-12,95;UBERON:0006601,2.39e-12,95;UBERON:0002780,1.46e-11,39;UBERON:0001890,1.46e-11,39;UBERON:0006240,1.46e-11,39;UBERON:0003080,3.78e-11,40;UBERON:0002346,4.65e-11,64;UBERON:0003075,4.65e-11,64;UBERON:0007284,4.65e-11,64;UBERON:0010371,6.69e-10,73;UBERON:0001948,1.77e-09,5;UBERON:0002315,1.77e-09,5;UBERON:0002616,4.56e-09,46;UBERON:0000955,8.95e-09,47;UBERON:0006238,8.95e-09,47;UBERON:0010314,1.01e-08,92;UBERON:0003528,1.40e-08,29;UBERON:0002791,1.40e-08,29;UBERON:0001893,1.40e-08,29;UBERON:0002420,2.88e-08,8;UBERON:0007245,2.88e-08,8;UBERON:0010009,2.88e-08,8;UBERON:0010011,2.88e-08,8;UBERON:0000454,2.88e-08,8;UBERON:0003056,3.17e-08,49;UBERON:0002240,8.38e-08,6;UBERON:0005174,8.38e-08,6;UBERON:0001137,8.38e-08,6;UBERON:0000369,3.81e-07,5;UBERON:0002435,3.81e-07,5;UBERON:0000204,3.81e-07,5;UBERON:0010082,3.81e-07,5
|phase1_expression=1.44133962394315,0.348975407639361,0,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,0.17008658030214,0,0.261199789138935,0.47997726838022,0,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0,0.279972843250725,2.87505128729943,0,0,0,0,0.85960031981627,0,4.24864567805155,5.28990979272033,3.1691570175309,1.0165335962074,0,0.449949858640699,0,0,1.19840044207362,0.768436610643109,5.39185984004084,4.72520784160917,5.46844899513593,3.14216082844184,2.42955395046775,4.77714116938321,5.65488279007595,2.75765635983006,1.10115880999389,0.510749352340751,1.38245879930619,5.67111037239834,6.22115976496386,6.25096044668112,0.837548997004143,1.12552522006336,1.22238598221448,2.35702868378934,1.56608848879013,2.98239113320481,0,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0.461230994512117,1.05505848386836,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,0,0,0.239630249011841,0,0.127070227073065,0.599162557619291,0,8.54449594367478,0,0.255715457330331,1.24672826735736,0.486723789203273,0.81471491080253,0,0.252722758433675,0,0.650602214813519,0.689706313300419,0.180062129805349,0.60281927134286,0.748401490664606,0.2562274405697,0.562210347358373,0,0.862271971731369,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498451196,0,0.411564272815887,1.19420560091096,0,0.257347907114715,0.284163499395593,0.621377317606506,0.469052119962192,1.08037236876609,0.23674473558521,0.787056926989615,1.23413690309903,0.930135779001631,0.804820204198858,0.233530684734339,0,0,0,0,0.219550115291051,0,0.210289948564127,2.88132914661996,0,0,0.639864751605702,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0.758671603812327,0.114248512609729,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0,0,0.123397163921801,0,0,0,0.224862112384854,0.608580364165509,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.937693492737625,0.163934945376675,0,1.26203287766503,0,0.215423397732799,0.238968797952552,0.668396022247182,0.849229592366497,0.404810701674894,0.876767573733936,0,0.642642632843614,0.283880170416537,1.06839362200353,0.81443479676788,0,0,0.728341908464944,1.209294227859,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,1.81102157295856,1.71469628025274,0.709360934569094,1.42695054081656,0.329098041204242,2.13125464380219,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.339956859987711,0.419854356970974,0.552799895217695,0,0.790839983952838,1.21991680276109,0.324016022465404,0.418176592028937,0.218362563746178,0.674321731924103,0.495920734352016,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,1.32366792365678,0.388902376688095,0.516639293910924,0.844780627453891,0.938857909166032,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.718976700153791,0.389762468933385,0.895133478337407,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0.335769232728157,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,1.24544817101012,0.798049746802062,1.19513524027894,0.486213434136588,0.838452650511929,0.919217542250071,0.222246727801615,1.03017528619447,0,0,0.25347929989024,0,0.468207537349412,1.02440243847791,0.631790158511746,0.476293691283074,0.463537303779422,1.15745532278223,0,0.441596760403192,0,1.06485483695602,0.476872379894642,0.145346416632329,0.564656282491984,0.592302255241736,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,1.18635018124174,1.18205378850676,0,0.619747364743864,1.15743966588685,1.99848462350357,0.467863216890817,0,0,0,0.463735671240843
|phase1_expression=1.44133962394315,0.348975407639361,0,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,0.17008658030214,0,0.261199789138935,0.47997726838022,0,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0,0.279972843250725,2.87505128729943,0,0,0,0,0.85960031981627,0,4.24864567805155,5.28990979272033,3.1691570175309,1.0165335962074,0,0.449949858640699,0,0,1.19840044207362,0.768436610643109,5.39185984004084,4.72520784160917,5.46844899513593,3.14216082844184,2.42955395046775,4.77714116938321,5.65488279007595,2.75765635983006,1.10115880999389,0.510749352340751,1.38245879930619,5.67111037239834,6.22115976496386,6.25096044668112,0.837548997004143,1.12552522006336,1.22238598221448,2.35702868378934,1.56608848879013,2.98239113320481,0,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0.461230994512117,1.05505848386836,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,0,0,0.239630249011841,0,0.127070227073065,0.599162557619291,0,8.54449594367478,0,0.255715457330331,1.24672826735736,0.486723789203273,0.81471491080253,0,0.252722758433675,0,0.650602214813519,0.689706313300419,0.180062129805349,0.60281927134286,0.748401490664606,0.2562274405697,0.562210347358373,0,0.862271971731369,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498451196,0,0.411564272815887,1.19420560091096,0,0.257347907114715,0.284163499395593,0.621377317606506,0.469052119962192,1.08037236876609,0.23674473558521,0.787056926989615,1.23413690309903,0.930135779001631,0.804820204198858,0.233530684734339,0,0,0,0,0.219550115291051,0,0.210289948564127,2.88132914661996,0,0,0.639864751605702,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0.758671603812327,0.114248512609729,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0,0,0.123397163921801,0,0,0,0.224862112384854,0.608580364165509,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.937693492737625,0.163934945376675,0,1.26203287766503,0,0.215423397732799,0.238968797952552,0.668396022247182,0.849229592366497,0.404810701674894,0.876767573733936,0,0.642642632843614,0.283880170416537,1.06839362200353,0.81443479676788,0,0,0.728341908464944,1.209294227859,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,1.81102157295856,1.71469628025274,0.709360934569094,1.42695054081656,0.329098041204242,2.13125464380219,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.339956859987711,0.419854356970974,0.552799895217695,0,0.790839983952838,1.21991680276109,0.324016022465404,0.418176592028937,0.218362563746178,0.674321731924103,0.495920734352016,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,1.32366792365678,0.388902376688095,0.516639293910924,0.844780627453891,0.938857909166032,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.718976700153791,0.389762468933385,0.895133478337407,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0.335769232728157,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,1.24544817101012,0.798049746802062,1.19513524027894,0.486213434136588,0.838452650511929,0.919217542250071,0.222246727801615,1.03017528619447,0,0,0.25347929989024,0,0.468207537349412,1.02440243847791,0.631790158511746,0.476293691283074,0.463537303779422,1.15745532278223,0,0.441596760403192,0,1.06485483695602,0.476872379894642,0.145346416632329,0.564656282491984,0.592302255241736,0.548783918618318,0.526139422875686,0.679020569229309,0.561142271657738,1.18635018124174,1.18205378850676,0,0.619747364743864,1.15743966588685,1.99848462350357,0.467863216890817,0,0,0,0.463735671240843
|short_description=p7@Pafah1b3
|short_description=p7@Pafah1b3
}}
}}

Latest revision as of 10:31, 26 September 2015

Short description:p7@Pafah1b3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Pafah1b3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 129bp_to_ENSMUST00000148150_5end
EntrezGene:Pafah1b3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Pafah1b3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.10e-1873
nervous system5.93e-1875
regional part of nervous system1.18e-1554
gray matter2.72e-1434
neural tube1.00e-1352
neural rod1.00e-1352
future spinal cord1.00e-1352
neural keel1.00e-1352
ectoderm-derived structure2.39e-1295
ectoderm2.39e-1295
presumptive ectoderm2.39e-1295
regional part of forebrain1.46e-1139
forebrain1.46e-1139
future forebrain1.46e-1139
anterior neural tube3.78e-1140
neurectoderm4.65e-1164
neural plate4.65e-1164
presumptive neural plate4.65e-1164
ecto-epithelium6.69e-1073
regional part of spinal cord1.77e-095
gray matter of spinal cord1.77e-095
regional part of brain4.56e-0946
brain8.95e-0947
future brain8.95e-0947
structure with developmental contribution from neural crest1.01e-0892
brain grey matter1.40e-0829
regional part of telencephalon1.40e-0829
telencephalon1.40e-0829
basal ganglion2.88e-088
nuclear complex of neuraxis2.88e-088
aggregate regional part of brain2.88e-088
collection of basal ganglia2.88e-088
cerebral subcortex2.88e-088
pre-chordal neural plate3.17e-0849
spinal cord8.38e-086
dorsal region element8.38e-086
dorsum8.38e-086
corpus striatum3.81e-075
striatum3.81e-075
ventral part of telencephalon3.81e-075
future corpus striatum3.81e-075
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