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FFCP PHASE1:Mm9::chr6:114232751..114232811,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:114232751..114232811,+
|DHSsupport=NA
|short_description=p1@Slc6a1
|DPIdataset=NA
|description=CAGE_peak_1_at_Slc6a1_5end
|association_with_transcript=122bp_to_ENSMUST00000032454,ENSMUST00000112994,NM_178703,uc009dht.2,uc009dhu.2,uc009dhv.2_5end
|EntrezGene=232333
|EntrezGene=232333
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P31648,E9Q9F4,Q6PCX2,Q8BPL9
|UniProt=P31648,E9Q9F4,Q6PCX2,Q8BPL9
|association_with_transcript=122bp_to_ENSMUST00000032454,ENSMUST00000112994,NM_178703,uc009dht.2,uc009dhu.2,uc009dhv.2_5end
|cluster_id=chr6:114232751..114232811,+
|description=CAGE_peak_1_at_Slc6a1_5end
|id=chr6:114232751..114232811,+
|ontology_enrichment_celltype=CL:0000221!1.52e-15!44;CL:0000133!1.52e-15!44;CL:0002319!2.28e-15!43;CL:0000117!3.48e-15!23;CL:0000337!3.48e-15!23;CL:0000540!6.38e-13!33;CL:0000047!6.38e-13!33;CL:0000031!6.38e-13!33;CL:0000404!6.38e-13!33;CL:0000055!2.55e-11!50;CL:0000393!2.20e-09!39;CL:0000211!2.20e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-18,23;CL:0000337,1.24e-18,23;CL:0000221,6.95e-13,44;CL:0000133,6.95e-13,44;CL:0002319,1.19e-12,43;CL:0000540,4.97e-11,33;CL:0000047,4.97e-11,33;CL:0000031,4.97e-11,33;CL:0000404,4.97e-11,33;CL:0000393,4.85e-08,39;CL:0000211,4.85e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.07e-34!75;UBERON:0001016!8.07e-34!75;UBERON:0001017!1.45e-33!73;UBERON:0005743!1.45e-33!73;UBERON:0000033!2.29e-30!63;UBERON:0001049!3.24e-28!52;UBERON:0005068!3.24e-28!52;UBERON:0006241!3.24e-28!52;UBERON:0007135!3.24e-28!52;UBERON:0004121!5.81e-28!102;UBERON:0000924!5.81e-28!102;UBERON:0006601!5.81e-28!102;UBERON:0000955!6.57e-27!50;UBERON:0006238!6.57e-27!50;UBERON:0002346!3.89e-26!71;UBERON:0003075!3.89e-26!71;UBERON:0007284!3.89e-26!71;UBERON:0002616!4.15e-26!49;UBERON:0003056!1.01e-23!49;UBERON:0002020!4.19e-21!34;UBERON:0003080!5.65e-20!40;UBERON:0002780!3.85e-19!39;UBERON:0001890!3.85e-19!39;UBERON:0006240!3.85e-19!39;UBERON:0002791!1.89e-17!29;UBERON:0003528!1.89e-17!29;UBERON:0001893!1.89e-17!29;UBERON:0007811!5.55e-16!86;UBERON:0000153!2.76e-13!94;UBERON:0000956!3.54e-12!21;UBERON:0001869!3.54e-12!21;UBERON:0000203!3.54e-12!21;UBERON:0002619!2.43e-10!17;UBERON:0003076!1.00e-08!12;UBERON:0003057!1.00e-08!12;UBERON:0002021!1.23e-07!10;UBERON:0000411!1.23e-07!10;UBERON:0001950!1.23e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-37,54;UBERON:0002346,1.96e-36,64;UBERON:0003075,1.96e-36,64;UBERON:0007284,1.96e-36,64;UBERON:0001017,6.39e-36,73;UBERON:0001049,2.92e-35,52;UBERON:0005068,2.92e-35,52;UBERON:0006241,2.92e-35,52;UBERON:0007135,2.92e-35,52;UBERON:0001016,2.55e-34,75;UBERON:0004121,2.82e-33,95;UBERON:0000924,2.82e-33,95;UBERON:0006601,2.82e-33,95;UBERON:0010371,3.81e-31,73;UBERON:0000955,2.23e-30,47;UBERON:0006238,2.23e-30,47;UBERON:0002616,2.15e-29,46;UBERON:0003056,1.16e-28,49;UBERON:0002020,4.60e-26,34;UBERON:0003080,6.83e-25,40;UBERON:0002780,7.67e-24,39;UBERON:0001890,7.67e-24,39;UBERON:0006240,7.67e-24,39;UBERON:0003528,1.78e-21,29;UBERON:0002791,1.78e-21,29;UBERON:0001893,1.78e-21,29;UBERON:0010314,7.69e-21,92;UBERON:0000956,7.31e-15,21;UBERON:0001869,7.31e-15,21;UBERON:0000203,7.31e-15,21;UBERON:0002619,1.46e-12,17;UBERON:0003076,1.54e-10,12;UBERON:0003057,1.54e-10,12;UBERON:0002021,3.52e-09,10;UBERON:0000411,3.52e-09,10;UBERON:0001950,3.52e-09,10;UBERON:0002420,8.39e-08,8;UBERON:0007245,8.39e-08,8;UBERON:0010009,8.39e-08,8;UBERON:0010011,8.39e-08,8;UBERON:0000454,8.39e-08,8;UBERON:0000025,6.82e-07,114
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,53.4922295050229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,7.82391344348039,14.8257106338704,3.29529274101708,3.30530828426282,7.41928034614421,11.5002051491977,0,0,0,0,0,0,86.7937617087674,108.972141730039,99.5115303504701,0.677689064138264,0,0,0.988866362566974,0,66.2116244245674,110.270653627286,17.3161652555158,21.0609263797437,20.8221711737868,365.061958068061,357.144430718759,77.291694304636,93.8327161268534,101.114066527102,503.229576167206,353.055489805544,372.342236613134,98.5190569344548,92.676982969241,89.076186365206,372.988486665845,390.557251361986,398.345031954144,290.503785277036,242.601344081671,118.177248653241,0.908714319998209,0.906858721281426,0,0,0,1.07940638327563,0,0,10.9546647702766,0,0,0,5.0703631119605,0,0,0,0,0,0,8.90634261808668,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.808834249737046,0.441683036920787,0.484875253135222,0,305.077590486032,371.767904593883,0,0,0,0,430.49829764946,275.872863499632,181.821847507315,270.644466539374,273.615539343454,348.252762681823,333.56803686731,0,0.622034853050465,0,34.7229062212682,0.520481771850815,3.44853156650209,8.10279584124071,40.5395959978074,108.790362142973,112.483846410098,104.477422884098,137.630193233156,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0.946978942340841,0.196764231747404,0.617068451549513,0.697601834251224,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,232.160103214796,112.886359780075,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.678980343100753,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,282.08738660855,293.263639853692,0,1.00988370881749,0.631016438832513,0.780877488593277,0.861693590931196,0.238968797952552,0,0.566153061577665,0.404810701674894,0.584511715822624,0,300.114109537968,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,8.28281032544027,9.05510786479281,8.78781843629528,10.1083933176096,14.4478742257677,7.73380396829969,4.87143918583359,0,0.847328283455281,0.220528398054962,0.16488625294148,0,0,0.238744688006273,0,0,328.759060464634,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16670713006429,0.387479470433193,0.337912250981556,0.469428954583016,0.2604087696879,1.25831213310853,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.19318959403219,0,0,0,0,234.9367665287,242.131074402775,254.938503480531,249.874527127722,227.447396563853,229.639744806469,214.657155073714,199.041971825105,202.101514406955,234.027660911823,1.24544817101012,16.7590446828433,13.4879548545766,11.6691224192781,10.4806581313991,8.64064489715066,15.7795176739147,23.0759264107562,13.1576875932644,16.6780159764106,19.010947491768,13.9583492625696,18.5410184790367,17.2867911493147,16.5988505281722,16.6702791949076,19.3526824327909,20.6412865896164,22.2526386433786,18.1054671765309,16.4577241144999,13.665637074269,18.1211504359964,14.6799880798652,16.5632509530982,17.5998384414687,19.9391490431322,13.41655528333,18.0619471414996,11.7839877048125,20.1679530811096,18.2233292394792,15.1415485972785,17.3529262128282,14.4679958235856,48.9628732758374,16.1412809827332,21.7019764588781,9.18183993930448,10.8089795368563,9.04284558919644
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,53.4922295050229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,7.82391344348039,14.8257106338704,3.29529274101708,3.30530828426282,7.41928034614421,11.5002051491977,0,0,0,0,0,0,86.7937617087674,108.972141730039,99.5115303504701,0.677689064138264,0,0,0.988866362566974,0,66.2116244245674,110.270653627286,17.3161652555158,21.0609263797437,20.8221711737868,365.061958068061,357.144430718759,77.291694304636,93.8327161268534,101.114066527102,503.229576167206,353.055489805544,372.342236613134,98.5190569344548,92.676982969241,89.076186365206,372.988486665845,390.557251361986,398.345031954144,290.503785277036,242.601344081671,118.177248653241,0.908714319998209,0.906858721281426,0,0,0,1.07940638327563,0,0,10.9546647702766,0,0,0,5.0703631119605,0,0,0,0,0,0,8.90634261808668,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.808834249737046,0.441683036920787,0.484875253135222,0,305.077590486032,371.767904593883,0,0,0,0,430.49829764946,275.872863499632,181.821847507315,270.644466539374,273.615539343454,348.252762681823,333.56803686731,0,0.622034853050465,0,34.7229062212682,0.520481771850815,3.44853156650209,8.10279584124071,40.5395959978074,108.790362142973,112.483846410098,104.477422884098,137.630193233156,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0.946978942340841,0.196764231747404,0.617068451549513,0.697601834251224,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,232.160103214796,112.886359780075,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.678980343100753,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,282.08738660855,293.263639853692,0,1.00988370881749,0.631016438832513,0.780877488593277,0.861693590931196,0.238968797952552,0,0.566153061577665,0.404810701674894,0.584511715822624,0,300.114109537968,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,8.28281032544027,9.05510786479281,8.78781843629528,10.1083933176096,14.4478742257677,7.73380396829969,4.87143918583359,0,0.847328283455281,0.220528398054962,0.16488625294148,0,0,0.238744688006273,0,0,328.759060464634,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16670713006429,0.387479470433193,0.337912250981556,0.469428954583016,0.2604087696879,1.25831213310853,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,1.13365191807606,0,0,0,0.19318959403219,0,0,0,0,234.9367665287,242.131074402775,254.938503480531,249.874527127722,227.447396563853,229.639744806469,214.657155073714,199.041971825105,202.101514406955,234.027660911823,1.24544817101012,16.7590446828433,13.4879548545766,11.6691224192781,10.4806581313991,8.64064489715066,15.7795176739147,23.0759264107562,13.1576875932644,16.6780159764106,19.010947491768,13.9583492625696,18.5410184790367,17.2867911493147,16.5988505281722,16.6702791949076,19.3526824327909,20.6412865896164,22.2526386433786,18.1054671765309,16.4577241144999,13.665637074269,18.1211504359964,14.6799880798652,16.5632509530982,17.5998384414687,19.9391490431322,13.41655528333,18.0619471414996,11.7839877048125,20.1679530811096,18.2233292394792,15.1415485972785,17.3529262128282,14.4679958235856,48.9628732758374,16.1412809827332,21.7019764588781,9.18183993930448,10.8089795368563,9.04284558919644
|short_description=p1@Slc6a1
}}
}}

Latest revision as of 11:47, 26 September 2015

Short description:p1@Slc6a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc6a1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 122bp_to_ENSMUST00000032454, ENSMUST00000112994, NM_178703, uc009dht.2, uc009dhu.2, uc009dhv.2_5end
EntrezGene:Slc6a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc6a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A353.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C386.79
Mouse Granule cells, donor2.CNhs12357.11731-123E3108.97
Mouse Granule cells, donor3.CNhs12108.11636-122C799.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C866.21
Mouse Microglia, donor2.CNhs12634.11736-123E8110.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.82
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1365.06
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5357.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D277.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F293.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6101.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3503.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3353.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7372.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D498.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F492.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D889.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4372.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5390.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6398.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6290.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6242.60
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1118.18
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2305.08
cerebellum, neonate N30.CNhs11135.1395-42I2371.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4430.50
corpus striatum, adult.CNhs10487.19-21D8275.87
corpus striatum, neonate N00.CNhs11226.630-43F1181.82
cortex, adult.CNhs10473.12-14D5270.64
cortex, neonate N30.CNhs11107.1392-42F2273.62
diencephalon, adult.CNhs10482.20-12F2348.25
diencephalon, neonate N30.CNhs11201.1388-42B2333.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G434.72
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D440.54
eyeball, neonate N00.CNhs11207.633-15C6108.79
eyeball, neonate N01.CNhs11140.1532-43E7112.48
eyeball, neonate N02.CNhs11205.1551-44G8104.48
eyeball, neonate N16.CNhs11188.777-19A2137.63
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8232.16
hippocampus, neonate N00.CNhs11228.627-43G1112.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2282.09
medulla oblongata, neonate N30.CNhs11200.1396-42A3293.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9300.11
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E68.28
pituitary gland, embryo E13.CNhs11009.370-44C79.06
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C9328.76
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1234.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2242.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3254.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7249.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4227.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5229.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6214.66
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7199.04
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8202.10
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9234.03
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C916.76
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.35
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I548.96
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C221.70
whole body, neonate N01.CNhs10576.659-23C69.18
whole body, neonate N06.CNhs10515.692-21D110.81
whole body, neonate N10.CNhs10518.761-6B49.04





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.24e-1823
neuroblast (sensu Vertebrata)1.24e-1823
ectodermal cell6.95e-1344
neurectodermal cell6.95e-1344
neural cell1.19e-1243
neuron4.97e-1133
neuronal stem cell4.97e-1133
neuroblast4.97e-1133
electrically signaling cell4.97e-1133
electrically responsive cell4.85e-0839
electrically active cell4.85e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.50e-3754
neurectoderm1.96e-3664
neural plate1.96e-3664
presumptive neural plate1.96e-3664
central nervous system6.39e-3673
neural tube2.92e-3552
neural rod2.92e-3552
future spinal cord2.92e-3552
neural keel2.92e-3552
nervous system2.55e-3475
ectoderm-derived structure2.82e-3395
ectoderm2.82e-3395
presumptive ectoderm2.82e-3395
ecto-epithelium3.81e-3173
brain2.23e-3047
future brain2.23e-3047
regional part of brain2.15e-2946
pre-chordal neural plate1.16e-2849
gray matter4.60e-2634
anterior neural tube6.83e-2540
regional part of forebrain7.67e-2439
forebrain7.67e-2439
future forebrain7.67e-2439
brain grey matter1.78e-2129
regional part of telencephalon1.78e-2129
telencephalon1.78e-2129
structure with developmental contribution from neural crest7.69e-2192
cerebral cortex7.31e-1521
cerebral hemisphere7.31e-1521
pallium7.31e-1521
regional part of cerebral cortex1.46e-1217
posterior neural tube1.54e-1012
chordal neural plate1.54e-1012
occipital lobe3.52e-0910
visual cortex3.52e-0910
neocortex3.52e-0910
basal ganglion8.39e-088
nuclear complex of neuraxis8.39e-088
aggregate regional part of brain8.39e-088
collection of basal ganglia8.39e-088
cerebral subcortex8.39e-088
tube6.82e-07114
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