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FFCP PHASE1:Mm9::chr2:30837848..30837868,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:30837848..30837868,+
|DHSsupport=NA
|short_description=p2@Usp20
|DPIdataset=NA
|description=CAGE_peak_2_at_Usp20_5end
|association_with_transcript=-14bp_to_ENSMUST00000061544_5end
|EntrezGene=74270
|EntrezGene=74270
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q8C9A6
|UniProt=Q8C9A6
|association_with_transcript=-14bp_to_ENSMUST00000061544_5end
|cluster_id=chr2:30837848..30837868,+
|description=CAGE_peak_2_at_Usp20_5end
|id=chr2:30837848..30837868,+
|ontology_enrichment_celltype=CL:0002319!4.09e-10!43;CL:0000221!4.72e-10!44;CL:0000133!4.72e-10!44;CL:0000540!6.56e-09!33;CL:0000047!6.56e-09!33;CL:0000031!6.56e-09!33;CL:0000404!6.56e-09!33;CL:0000055!2.36e-08!50;CL:0000117!2.60e-08!23;CL:0000337!2.60e-08!23;CL:0000393!5.34e-07!39;CL:0000211!5.34e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002319,3.94e-10,43;CL:0000221,4.55e-10,44;CL:0000133,4.55e-10,44;CL:0000540,6.34e-09,33;CL:0000047,6.34e-09,33;CL:0000031,6.34e-09,33;CL:0000404,6.34e-09,33;CL:0000117,2.53e-08,23;CL:0000337,2.53e-08,23;CL:0000393,5.53e-07,39;CL:0000211,5.53e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.04e-25!73;UBERON:0005743!2.04e-25!73;UBERON:0000073!9.24e-25!75;UBERON:0001016!9.24e-25!75;UBERON:0004121!1.08e-24!102;UBERON:0000924!1.08e-24!102;UBERON:0006601!1.08e-24!102;UBERON:0001049!1.39e-19!52;UBERON:0005068!1.39e-19!52;UBERON:0006241!1.39e-19!52;UBERON:0007135!1.39e-19!52;UBERON:0002346!2.69e-19!71;UBERON:0003075!2.69e-19!71;UBERON:0007284!2.69e-19!71;UBERON:0000955!4.02e-19!50;UBERON:0006238!4.02e-19!50;UBERON:0002616!1.39e-18!49;UBERON:0000033!3.68e-18!63;UBERON:0002020!2.85e-14!34;UBERON:0003080!3.84e-14!40;UBERON:0002780!1.24e-13!39;UBERON:0001890!1.24e-13!39;UBERON:0006240!1.24e-13!39;UBERON:0003056!5.02e-13!49;UBERON:0002791!3.26e-12!29;UBERON:0003528!3.26e-12!29;UBERON:0001893!3.26e-12!29;UBERON:0000956!6.68e-10!21;UBERON:0001869!6.68e-10!21;UBERON:0000203!6.68e-10!21;UBERON:0002619!2.83e-09!17;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10;UBERON:0004111!2.70e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.84e-25,73;UBERON:0001016,8.32e-25,75;UBERON:0004121,1.29e-23,95;UBERON:0000924,1.29e-23,95;UBERON:0006601,1.29e-23,95;UBERON:0000073,7.13e-21,54;UBERON:0001049,1.29e-19,52;UBERON:0005068,1.29e-19,52;UBERON:0006241,1.29e-19,52;UBERON:0007135,1.29e-19,52;UBERON:0010371,6.39e-19,73;UBERON:0002346,1.50e-18,64;UBERON:0003075,1.50e-18,64;UBERON:0007284,1.50e-18,64;UBERON:0000955,2.69e-17,47;UBERON:0006238,2.69e-17,47;UBERON:0002616,9.04e-17,46;UBERON:0010314,6.02e-15,92;UBERON:0002020,2.70e-14,34;UBERON:0003080,3.62e-14,40;UBERON:0002780,1.17e-13,39;UBERON:0001890,1.17e-13,39;UBERON:0006240,1.17e-13,39;UBERON:0003056,4.76e-13,49;UBERON:0003528,3.11e-12,29;UBERON:0002791,3.11e-12,29;UBERON:0001893,3.11e-12,29;UBERON:0000956,6.43e-10,21;UBERON:0001869,6.43e-10,21;UBERON:0000203,6.43e-10,21;UBERON:0002619,2.73e-09,17;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10;UBERON:0004111,3.23e-07,122
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|phase1_expression=3.84357233051505,1.74487703819681,1.81999695755814,3.62957053568196,3.50627010962443,0.839396359559449,1.16806320297763,0.774739940649458,0.703943610758334,0.468129052643987,1.71217968225505,1.11681022593471,1.54080656938085,1.04904482902797,0,1.82227740650843,0,1.89277299214943,1.23402990245165,0.42438965179803,6.97354979238772,0.992909512008853,1.04479915655574,1.43993180514066,1.37645568640302,0.57423196411502,1.29228598847722,0.646413698057667,1.33016393619462,1.00812051903972,0.665191531965914,2.54012269383853,4.92051830067656,15.8481681015439,0,0.664938581433969,1.02084678131185,0.837063261473815,0,1.0470474879476,0,0.683045484958446,0.971020706062307,1.25896817975577,2.12891555560981,2.0190142737785,2.34717403304412,4.36050312760893,3.07560655828261,3.30530828426282,2.79972843250725,4.31257693094915,1.34226084846189,0,1.34437519656986,0.771778308107841,1.71920063963254,3.6097046459421,2.83243045203437,6.34789175126439,5.07065122804943,1.35537812827653,2.66788438833342,4.04954872776629,13.8441290759376,4.2628806896766,3.89480143673926,8.4528027170742,3.7328260431052,4.05017814995072,2.10324961351382,5.99867067247988,7.28866185140325,3.30725157880376,3.83381884072945,8.27296907949019,9.91042928994498,9.3211756802187,10.4452442614246,3.56092976871523,2.74462930807229,2.08365348222704,11.1673199600552,9.56696437053856,7.18151764551008,3.83017161115768,5.97961059356232,4.28718725398191,1.8931548333296,2.19157524309678,3.47837386442013,2.58127163094416,1.3599426674155,1.07940638327563,3.24888208723835,2.24013443548668,1.96622188184453,2.89731548382698,2.07828803682295,3.88673531961374,2.39433813620357,0,5.09610479413291,0,1.08245520505607,1.26679932737549,1.01104889002957,2.62622923353838,2.07150306917737,4.89859058913922,0.867426633830679,2.74018930480927,4.61230994512117,3.3158980921577,3.99801604261396,3.14166478324189,1.23597483867187,2.31358971071859,0.884610551949874,1.7794353494215,2.20841518460394,1.93950101254089,5.59175283654366,6.73395833126558,9.63454851341893,0.766371165625774,0.958520996047362,0.599902730993408,0.254140454146129,7.48953197024113,7.77751024791665,4.52355667606312,8.8650403298061,12.5300574091862,8.93488591606108,9.89671704713322,1.2220723662038,3.23458123586242,8.59257378674494,2.31486041475121,1.82168620147785,1.83921683546778,1.62055916824814,2.86339153887859,2.31324097114515,3.45907044769094,2.90475346135159,4.13925393182425,1.29340795759705,0.945530400839096,1.75951124163949,1.97276159184817,3.89266148915837,3.1342694986995,2.26360350048738,1.59227413454795,0,1.02939162845886,0.284163499395593,1.44988040774851,3.28336483973535,2.34080679899319,2.60419209143731,1.57411385397923,1.69693824176116,2.09280550275367,1.3413670069981,1.75148013550754,1.6455984991348,1.80584210487005,1.54030738137126,2.48539978623065,1.97595103761946,1.74468344388483,13.4585567081041,4.21908910755066,1.65209391491899,0.793351699990633,0.639864751605702,3.48355007790658,1.41754207454303,1.4117846723634,3.11329261382818,1.33157938278791,2.37264530772256,1.81168850196412,2.01068167040216,1.39269530428806,1.9496408711912,1.79763881730844,1.51296634912286,1.99141273254367,1.89667900953082,1.82797620175566,3.38123207019241,1.83286195060783,0.969762435838129,2.10407459670956,1.7706230394792,1.47610147979602,0.627994911365499,1.35736880313981,1.77871576252289,1.33476084572875,1.17935397067922,1.57403478669398,1.62288097110802,0.964708639009667,1.52775511068852,1.43848068725405,1.62135226775035,1.92192989231657,4.31304619582064,2.60498663367952,2.18426371180192,1.51547326768267,1.07638448113147,1.4473305640901,2.58654466233247,1.89491411770485,1.95557971730431,0.848725428875941,1.64283173801951,1.84256883185997,1.6663054862021,1.36593553500459,1.7339865851681,2.43611158613652,1.2756381492599,1.96635977658886,2.07221978239075,3.47157740595628,4.52373851817817,4.89515115436839,2.45882136509518,1.37968373152366,12.0412942490844,13.0104972117346,1.47541450839008,0.757412781613119,2.2085575359138,2.34263246577983,5.38558494331997,3.10659437338318,4.23317480756549,3.11384183867716,2.42886421004937,2.33804686329049,2.76701444562566,7.39039027770156,3.12268187458191,1.78065603667255,1.95464351224291,3.13443233647817,1.32745138339963,1.45668381692989,0.302323556964751,2.07465587731488,2.36241514304618,2.45948118355142,2.32585463851399,2.18120237686503,1.42598951353889,4.10847785316561,2.10837217149998,2.06271086496374,6.12791290356818,2.16073312837572,3.10460841078611,2.35770738534752,2.48276327099183,3.92411398724555,2.46823530903181,3.34911444026059,2.3467170806371,3.38931313382112,3.30792597082443,3.79238381765404,3.87514624070173,2.29189114726992,3.46179797609096,2.79039529566604,2.91480836629851,10.3838169125885,0.512612642393558,2.88941615148511,1.29636169158798,2.26042148405629,1.36694227721025,1.83022538565218,1.5298058699447,0.979660166265606,1.10559979043539,2.86401185404534,1.58167996790568,2.23651413839534,2.48412283890143,3.55450103224597,1.74690050996942,2.56242258131159,2.56225712748541,1.83229159388821,1.8146096260851,1.86401793926078,24.8024893021044,2.69129782879162,2.64733584731356,4.27792614356905,3.22899558694328,4.89972763923257,3.63807439801837,2.3436789271911,3.56521771047417,9.42178071221424,11.2331702440568,1.26404448251271,1.62180172232131,1.33524244314275,0.649604114888975,0.895133478337407,0.39736270956253,1.44234539423963,0.590758108698309,1.41353029927407,1.5241361331,0.705783295957884,1.16949456887703,1.15454209968395,1.5193997283604,4.98806843953465,0.887943813496259,0.62799699626633,2.01461539636894,3.47741269257943,1.87682475451182,1.46521299413812,2.57242054894879,2.50786052017682,9.60078132449013,9.66682996665071,8.02053718815155,8.76451229952807,15.0718154349541,10.5755145634558,15.5255175053315,17.5625269257446,14.5005570874945,11.9084871702919,0.726511433089237,3.19219898720825,1.70733605754134,2.43106717068294,1.25767897576789,2.02227859295016,1.33348036680969,2.67845574410562,1.92551525755089,4.04315538822076,2.78827229879264,2.07488975524684,3.46473577638565,2.36893063898016,1.95280594449085,5.71552429539688,3.94006708212509,2.89363830695558,1.64834360321323,2.94397840268795,2.40008476669791,1.95223386775271,2.38436189947321,2.90692833264657,2.1645157495526,2.19997980518359,4.20734337607377,2.36762740294059,2.44447404922551,3.36685362994643,1.89816028998679,2.46261205938909,2.45538625901814,2.94379998253335,1.54325288784913,7.49431733813838,3.50897412668113,3.86767897286937,4.3996316375834,3.52946270591225,2.08681052058379
|short_description=p2@Usp20
}}
}}

Latest revision as of 13:27, 26 September 2015

Short description:p2@Usp20
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Usp20_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -14bp_to_ENSMUST00000061544_5end
EntrezGene:Usp20
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Usp20

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell3.94e-1043
ectodermal cell4.55e-1044
neurectodermal cell4.55e-1044
neuron6.34e-0933
neuronal stem cell6.34e-0933
neuroblast6.34e-0933
electrically signaling cell6.34e-0933
CNS neuron (sensu Vertebrata)2.53e-0823
neuroblast (sensu Vertebrata)2.53e-0823
electrically responsive cell5.53e-0739
electrically active cell5.53e-0739

Uber anatomy
Ontology termp-valuen
central nervous system1.84e-2573
nervous system8.32e-2575
ectoderm-derived structure1.29e-2395
ectoderm1.29e-2395
presumptive ectoderm1.29e-2395
regional part of nervous system7.13e-2154
neural tube1.29e-1952
neural rod1.29e-1952
future spinal cord1.29e-1952
neural keel1.29e-1952
ecto-epithelium6.39e-1973
neurectoderm1.50e-1864
neural plate1.50e-1864
presumptive neural plate1.50e-1864
brain2.69e-1747
future brain2.69e-1747
regional part of brain9.04e-1746
structure with developmental contribution from neural crest6.02e-1592
gray matter2.70e-1434
anterior neural tube3.62e-1440
regional part of forebrain1.17e-1339
forebrain1.17e-1339
future forebrain1.17e-1339
pre-chordal neural plate4.76e-1349
brain grey matter3.11e-1229
regional part of telencephalon3.11e-1229
telencephalon3.11e-1229
cerebral cortex6.43e-1021
cerebral hemisphere6.43e-1021
pallium6.43e-1021
regional part of cerebral cortex2.73e-0917
occipital lobe1.35e-0710
visual cortex1.35e-0710
neocortex1.35e-0710
anatomical conduit3.23e-07122
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