FFCP PHASE1:Mm9::chr9:34296306..34296330,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:34296306..34296330,+ to FFCP PHASE1:Mm9::chr9:34296306..34296330,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67703 | |EntrezGene=67703 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=367 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BR86 | |UniProt=Q8BR86 | ||
|association_with_transcript=0bp_to_NM_001190911,NM_001190912,NM_001190913,NM_001190914,NM_026324_5end | |||
|cluster_id=chr9:34296306..34296330,+ | |||
|description=CAGE_peak_1_at_Kirrel3_5end | |||
|id=chr9:34296306..34296330,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.45e-15!33;CL:0000047!7.45e-15!33;CL:0000031!7.45e-15!33;CL:0000404!7.45e-15!33;CL:0000117!1.50e-14!23;CL:0000337!1.50e-14!23;CL:0000221!9.96e-14!44;CL:0000133!9.96e-14!44;CL:0002319!1.77e-13!43;CL:0000393!3.59e-11!39;CL:0000211!3.59e-11!39;CL:0000055!6.20e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.71e-18,33;CL:0000047,2.71e-18,33;CL:0000031,2.71e-18,33;CL:0000404,2.71e-18,33;CL:0000117,1.59e-17,23;CL:0000337,1.59e-17,23;CL:0000221,3.22e-16,44;CL:0000133,3.22e-16,44;CL:0002319,6.54e-16,43;CL:0000393,5.87e-14,39;CL:0000211,5.87e-14,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.23e-29!73;UBERON:0005743!4.23e-29!73;UBERON:0000073!5.47e-28!75;UBERON:0001016!5.47e-28!75;UBERON:0004121!6.43e-24!102;UBERON:0000924!6.43e-24!102;UBERON:0006601!6.43e-24!102;UBERON:0002346!9.29e-23!71;UBERON:0003075!9.29e-23!71;UBERON:0007284!9.29e-23!71;UBERON:0001049!2.58e-22!52;UBERON:0005068!2.58e-22!52;UBERON:0006241!2.58e-22!52;UBERON:0007135!2.58e-22!52;UBERON:0000033!1.28e-21!63;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002616!5.64e-20!49;UBERON:0002020!1.66e-19!34;UBERON:0003056!9.67e-18!49;UBERON:0003080!1.23e-16!40;UBERON:0002780!5.14e-16!39;UBERON:0001890!5.14e-16!39;UBERON:0006240!5.14e-16!39;UBERON:0002791!6.13e-16!29;UBERON:0003528!6.13e-16!29;UBERON:0001893!6.13e-16!29;UBERON:0000153!2.92e-15!94;UBERON:0007811!7.82e-14!86;UBERON:0000956!3.20e-11!21;UBERON:0001869!3.20e-11!21;UBERON:0000203!3.20e-11!21;UBERON:0002619!2.71e-09!17;UBERON:0000468!2.78e-07!333;UBERON:0002021!3.36e-07!10;UBERON:0000411!3.36e-07!10;UBERON:0001950!3.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.99e-36,73;UBERON:0001016,4.15e-34,75;UBERON:0002346,2.64e-29,64;UBERON:0003075,2.64e-29,64;UBERON:0007284,2.64e-29,64;UBERON:0004121,3.27e-29,95;UBERON:0000924,3.27e-29,95;UBERON:0006601,3.27e-29,95;UBERON:0000073,1.00e-28,54;UBERON:0001049,4.03e-27,52;UBERON:0005068,4.03e-27,52;UBERON:0006241,4.03e-27,52;UBERON:0007135,4.03e-27,52;UBERON:0010371,2.41e-25,73;UBERON:0000955,5.65e-23,47;UBERON:0006238,5.65e-23,47;UBERON:0002020,8.80e-23,34;UBERON:0002616,4.37e-22,46;UBERON:0003056,4.72e-20,49;UBERON:0003080,9.45e-20,40;UBERON:0002780,5.46e-19,39;UBERON:0001890,5.46e-19,39;UBERON:0006240,5.46e-19,39;UBERON:0003528,2.01e-18,29;UBERON:0002791,2.01e-18,29;UBERON:0001893,2.01e-18,29;UBERON:0010314,1.46e-16,92;UBERON:0000956,1.16e-12,21;UBERON:0001869,1.16e-12,21;UBERON:0000203,1.16e-12,21;UBERON:0002619,2.65e-10,17;UBERON:0002021,1.70e-08,10;UBERON:0000411,1.70e-08,10;UBERON:0001950,1.70e-08,10;UBERON:0003076,7.35e-08,12;UBERON:0003057,7.35e-08,12;UBERON:0002420,5.01e-07,8;UBERON:0007245,5.01e-07,8;UBERON:0010009,5.01e-07,8;UBERON:0010011,5.01e-07,8;UBERON:0000454,5.01e-07,8 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,3.99703463710028,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,1.01376931219515,0.183546752161682,0,2.18025156380447,0.878744730937887,1.36100929351998,1.25987779462826,10.062679505548,0,0,0,0,0,0,15.1737345644698,23.8045940672415,16.4796164911607,0.677689064138264,0.889294796111139,0,0,0.7104801149461,2.99600110518405,3.45796474789399,12.1316846400919,15.255671031481,13.8814474491912,36.5633260036869,44.1737081903227,12.2490799214954,16.2937300731002,27.5765635983006,22.0231761998777,12.6410464704336,15.8214729253931,30.0700736024842,23.2378614750121,23.962015045611,14.5175159480718,10.6924895906019,17.1134037510027,35.0608016713665,25.7692742246376,24.4183274031144,0.227178579999552,0.226714680320357,0,0,0,0.539703191637817,0,0,1.12355536105401,0.170430322578058,0,0,3.80277233397037,5.13305909657271,10.1922095882658,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,0.29688427812965,1.90833859442749,1.21786191324856,0.230615497256059,0.452167921657868,0.705532242814229,0,0,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,61.4839673724249,88.8054036889049,0,0,0,0,22.0192239925089,23.33253074375,20.6073137465098,12.1677024134594,17.3886510984625,17.8697718321222,20.4423991465375,0.305518091550949,0.248813941220186,0,3.78795340595653,0.390361328888111,0.919608417733892,2.70093194708024,2.10986744970001,2.4493139694478,3.71529788826064,3.84177070694888,11.9003550539947,0.215567992932842,4.9167580843633,7.9178005873777,4.3839146485515,4.72680323683516,2.43776516565517,1.4404749548556,0.796137067273973,0,0,0,0,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,1.3884040159864,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.32833492815819,0.486412857275134,1.46199987425332,0.219550115291051,0.134206418760372,15.7717461423095,7.10041825417063,0,0.264450566663544,1.70630600428187,2.78684006232526,1.28867461322093,0.605050573870028,0.889512175379481,0,0.949058123089023,0.988193728344065,0.502670417600539,0.994782360205754,0.58489226135736,0,0,0.199141273254367,0.758671603812327,2.05647322697512,1.1270773567308,0.814605311381257,0.775809948670503,0.420814919341911,2.59269802209455,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,1.32643988239339,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.975668239288994,0.630540576424764,1.55025282754142,1.2756381492599,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,2.20749397043786,11.0779907091576,18.2850231083837,0.655739781506702,0,6.62567260774139,10.5418460960092,9.69405289797595,1.43381278771531,0,1.13230612315533,1.61924280669958,4.38383786866968,4.74345333535828,38.5585579706168,0.141940085208269,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,1.18120757152309,0,5.16856586336442,3.27180356529755,3.92147116223193,0.632073515871632,1.05418608574999,0,1.02131881726136,0,1.16422815404479,2.14337035031592,1.77340233642274,3.0322698992352,2.79733335023606,1.522324745573,0,0,0,0,0.322928853391811,0.241251699712623,0,0.164140899745061,0,11.8672193286726,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0.138199973804424,0,3.47969592939249,0.609958401380546,0.648032044930808,0.418176592028937,0.655087691238533,1.48350781023303,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,0,0.598066184175915,1.32366792365678,1.36115831840833,2.45403664607689,1.520605129417,1.5256441023948,0.5208175393758,0.209718688851422,0,0.576060012515731,0.316011120628178,2.02725215290164,1.1298205288131,0.649604114888975,0.716106782669926,0.198681354781265,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,36.7088697701093,23.9369122983732,31.5092532391668,24.2312987104599,20.5524755931193,18.8848474347425,15.5255175053315,13.9599572999508,11.7817026335893,19.6748918465692,0.62272408550506,1.99512436700516,5.80494259564056,6.56388136084394,1.46729213839588,2.02227859295016,5.33392146723877,5.76898160268904,6.4183841918363,4.54854981174835,6.84394109703647,3.39527414494937,4.58843386602424,4.86591158277006,4.25022470271538,5.71552429539688,3.70829843023538,5.40145817298374,3.70877310722976,5.5935589651071,4.4573002810104,3.72699192934609,5.00715998889374,5.81385666529314,5.74067220533517,3.63842813934209,3.84148743032822,3.94604567156764,3.66671107383827,4.48913817326191,4.74540072496697,4.43270170690036,2.45538625901814,4.49316839439301,3.2794123866794,9.242991383704,4.21076895201735,3.43793686477277,1.53030665655075,2.42650561031467,1.85494268496337 | |phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,3.99703463710028,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,1.01376931219515,0.183546752161682,0,2.18025156380447,0.878744730937887,1.36100929351998,1.25987779462826,10.062679505548,0,0,0,0,0,0,15.1737345644698,23.8045940672415,16.4796164911607,0.677689064138264,0.889294796111139,0,0,0.7104801149461,2.99600110518405,3.45796474789399,12.1316846400919,15.255671031481,13.8814474491912,36.5633260036869,44.1737081903227,12.2490799214954,16.2937300731002,27.5765635983006,22.0231761998777,12.6410464704336,15.8214729253931,30.0700736024842,23.2378614750121,23.962015045611,14.5175159480718,10.6924895906019,17.1134037510027,35.0608016713665,25.7692742246376,24.4183274031144,0.227178579999552,0.226714680320357,0,0,0,0.539703191637817,0,0,1.12355536105401,0.170430322578058,0,0,3.80277233397037,5.13305909657271,10.1922095882658,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,0.29688427812965,1.90833859442749,1.21786191324856,0.230615497256059,0.452167921657868,0.705532242814229,0,0,0.578397427679647,0,0.323533699894818,0.441683036920787,0.484875253135222,0,61.4839673724249,88.8054036889049,0,0,0,0,22.0192239925089,23.33253074375,20.6073137465098,12.1677024134594,17.3886510984625,17.8697718321222,20.4423991465375,0.305518091550949,0.248813941220186,0,3.78795340595653,0.390361328888111,0.919608417733892,2.70093194708024,2.10986744970001,2.4493139694478,3.71529788826064,3.84177070694888,11.9003550539947,0.215567992932842,4.9167580843633,7.9178005873777,4.3839146485515,4.72680323683516,2.43776516565517,1.4404749548556,0.796137067273973,0,0,0,0,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,1.3884040159864,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.32833492815819,0.486412857275134,1.46199987425332,0.219550115291051,0.134206418760372,15.7717461423095,7.10041825417063,0,0.264450566663544,1.70630600428187,2.78684006232526,1.28867461322093,0.605050573870028,0.889512175379481,0,0.949058123089023,0.988193728344065,0.502670417600539,0.994782360205754,0.58489226135736,0,0,0.199141273254367,0.758671603812327,2.05647322697512,1.1270773567308,0.814605311381257,0.775809948670503,0.420814919341911,2.59269802209455,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,1.32643988239339,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.975668239288994,0.630540576424764,1.55025282754142,1.2756381492599,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,2.20749397043786,11.0779907091576,18.2850231083837,0.655739781506702,0,6.62567260774139,10.5418460960092,9.69405289797595,1.43381278771531,0,1.13230612315533,1.61924280669958,4.38383786866968,4.74345333535828,38.5585579706168,0.141940085208269,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0,0.377210159511796,1.18120757152309,0,5.16856586336442,3.27180356529755,3.92147116223193,0.632073515871632,1.05418608574999,0,1.02131881726136,0,1.16422815404479,2.14337035031592,1.77340233642274,3.0322698992352,2.79733335023606,1.522324745573,0,0,0,0,0.322928853391811,0.241251699712623,0,0.164140899745061,0,11.8672193286726,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0.138199973804424,0,3.47969592939249,0.609958401380546,0.648032044930808,0.418176592028937,0.655087691238533,1.48350781023303,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,0,0.598066184175915,1.32366792365678,1.36115831840833,2.45403664607689,1.520605129417,1.5256441023948,0.5208175393758,0.209718688851422,0,0.576060012515731,0.316011120628178,2.02725215290164,1.1298205288131,0.649604114888975,0.716106782669926,0.198681354781265,0.360586348559907,0.295379054349154,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,36.7088697701093,23.9369122983732,31.5092532391668,24.2312987104599,20.5524755931193,18.8848474347425,15.5255175053315,13.9599572999508,11.7817026335893,19.6748918465692,0.62272408550506,1.99512436700516,5.80494259564056,6.56388136084394,1.46729213839588,2.02227859295016,5.33392146723877,5.76898160268904,6.4183841918363,4.54854981174835,6.84394109703647,3.39527414494937,4.58843386602424,4.86591158277006,4.25022470271538,5.71552429539688,3.70829843023538,5.40145817298374,3.70877310722976,5.5935589651071,4.4573002810104,3.72699192934609,5.00715998889374,5.81385666529314,5.74067220533517,3.63842813934209,3.84148743032822,3.94604567156764,3.66671107383827,4.48913817326191,4.74540072496697,4.43270170690036,2.45538625901814,4.49316839439301,3.2794123866794,9.242991383704,4.21076895201735,3.43793686477277,1.53030665655075,2.42650561031467,1.85494268496337 | ||
|short_description=p1@Kirrel3 | |||
}} | }} |
Latest revision as of 14:00, 26 September 2015
Short description: | p1@Kirrel3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kirrel3_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | 0bp_to_NM_001190911, NM_001190912, NM_001190913, NM_001190914, NM_026324_5end |
EntrezGene: | Kirrel3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.71e-18 | 33 |
neuronal stem cell | 2.71e-18 | 33 |
neuroblast | 2.71e-18 | 33 |
electrically signaling cell | 2.71e-18 | 33 |
CNS neuron (sensu Vertebrata) | 1.59e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-17 | 23 |
ectodermal cell | 3.22e-16 | 44 |
neurectodermal cell | 3.22e-16 | 44 |
neural cell | 6.54e-16 | 43 |
electrically responsive cell | 5.87e-14 | 39 |
electrically active cell | 5.87e-14 | 39 |