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FFCP PHASE1:Mm9::chr7:31148109..31148156,-: Difference between revisions

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(Created page with "{{FFCP |id=chr7:31148109..31148156,- |short_description=p1@Lrfn3 |description=CAGE_peak_1_at_Lrfn3_5end |association_with_transcript=-318bp_to_ENSMUST00000046351,NM_175478...")
 
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{{FFCP
{{FFCP
|id=chr7:31148109..31148156,-
|DHSsupport=NA
|short_description=p1@Lrfn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Lrfn3_5end
|association_with_transcript=-318bp_to_ENSMUST00000046351,NM_175478,uc009gee.1_5end
|EntrezGene=233067
|EntrezGene=233067
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8BLY3
|UniProt=Q8BLY3
|association_with_transcript=-318bp_to_ENSMUST00000046351,NM_175478,uc009gee.1_5end
|cluster_id=chr7:31148109..31148156,-
|description=CAGE_peak_1_at_Lrfn3_5end
|id=chr7:31148109..31148156,-
|ontology_enrichment_celltype=CL:0000117!3.07e-13!23;CL:0000337!3.07e-13!23;CL:0000221!5.26e-13!44;CL:0000133!5.26e-13!44;CL:0002319!5.60e-13!43;CL:0000055!3.45e-12!50;CL:0000540!1.85e-10!33;CL:0000047!1.85e-10!33;CL:0000031!1.85e-10!33;CL:0000404!1.85e-10!33;CL:0000393!1.06e-09!39;CL:0000211!1.06e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.65e-13,23;CL:0000337,2.65e-13,23;CL:0000221,4.57e-13,44;CL:0000133,4.57e-13,44;CL:0002319,4.87e-13,43;CL:0000540,1.66e-10,33;CL:0000047,1.66e-10,33;CL:0000031,1.66e-10,33;CL:0000404,1.66e-10,33;CL:0000393,9.56e-10,39;CL:0000211,9.56e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.37e-31!73;UBERON:0005743!3.37e-31!73;UBERON:0000073!3.06e-30!75;UBERON:0001016!3.06e-30!75;UBERON:0001049!1.88e-27!52;UBERON:0005068!1.88e-27!52;UBERON:0006241!1.88e-27!52;UBERON:0007135!1.88e-27!52;UBERON:0002346!1.65e-26!71;UBERON:0003075!1.65e-26!71;UBERON:0007284!1.65e-26!71;UBERON:0004121!2.93e-26!102;UBERON:0000924!2.93e-26!102;UBERON:0006601!2.93e-26!102;UBERON:0000955!3.25e-26!50;UBERON:0006238!3.25e-26!50;UBERON:0002616!1.25e-25!49;UBERON:0000033!5.93e-24!63;UBERON:0003080!7.86e-21!40;UBERON:0002780!3.02e-20!39;UBERON:0001890!3.02e-20!39;UBERON:0006240!3.02e-20!39;UBERON:0002020!1.27e-19!34;UBERON:0003056!1.28e-19!49;UBERON:0002791!8.67e-17!29;UBERON:0003528!8.67e-17!29;UBERON:0001893!8.67e-17!29;UBERON:0000025!1.24e-13!114;UBERON:0004111!6.91e-13!122;UBERON:0000956!1.13e-12!21;UBERON:0001869!1.13e-12!21;UBERON:0000203!1.13e-12!21;UBERON:0002619!1.47e-10!17;UBERON:0000468!9.01e-09!333;UBERON:0000475!9.16e-08!200;UBERON:0007811!1.78e-07!86;UBERON:0000922!1.97e-07!328;UBERON:0000153!2.44e-07!94;UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10;UBERON:0003076!4.27e-07!12;UBERON:0003057!4.27e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.33e-31,73;UBERON:0001016,2.14e-30,75;UBERON:0000073,6.89e-29,54;UBERON:0001049,1.36e-27,52;UBERON:0005068,1.36e-27,52;UBERON:0006241,1.36e-27,52;UBERON:0007135,1.36e-27,52;UBERON:0002346,2.73e-25,64;UBERON:0003075,2.73e-25,64;UBERON:0007284,2.73e-25,64;UBERON:0000955,1.42e-24,47;UBERON:0006238,1.42e-24,47;UBERON:0004121,1.82e-24,95;UBERON:0000924,1.82e-24,95;UBERON:0006601,1.82e-24,95;UBERON:0002616,5.40e-24,46;UBERON:0010371,2.49e-21,73;UBERON:0003080,6.19e-21,40;UBERON:0002780,2.40e-20,39;UBERON:0001890,2.40e-20,39;UBERON:0006240,2.40e-20,39;UBERON:0002020,1.01e-19,34;UBERON:0003056,1.02e-19,49;UBERON:0003528,7.18e-17,29;UBERON:0002791,7.18e-17,29;UBERON:0001893,7.18e-17,29;UBERON:0010314,1.12e-16,92;UBERON:0000025,2.00e-13,114;UBERON:0000956,9.89e-13,21;UBERON:0001869,9.89e-13,21;UBERON:0000203,9.89e-13,21;UBERON:0004111,1.09e-12,122;UBERON:0002619,1.31e-10,17;UBERON:0002021,3.60e-07,10;UBERON:0000411,3.60e-07,10;UBERON:0001950,3.60e-07,10;UBERON:0003076,3.98e-07,12;UBERON:0003057,3.98e-07,12
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4.98806843953465,1.99787358036658,0.897138566094757,2.01461539636894,15.8415467106396,8.63339387075437,8.97442958909599,5.35920947697665,1.00314420807073,36.1441179274923,29.9211403729665,27.498984645091,36.9484342038928,17.8121455140367,29.4603619981983,23.6257875081132,19.8141329418657,18.5788387683524,27.9590568345983,3.84013186061454,10.3746467084268,6.65861062441123,7.05009479498053,7.96530017986333,6.98605332110054,5.55616819504038,7.2112270033613,4.81378814387723,7.83361356467772,7.60437899670719,6.03604292435444,8.24045265734965,7.61899313617944,8.84506221916444,7.1444053692461,7.18482820858104,10.9958255664312,7.00546031365621,6.03515572551029,5.48590803816665,6.38912902173615,6.67621331852499,9.30217066446903,7.81107857447244,6.76916863133412,5.3049112133104,7.62902163169744,6.65440157844723,8.97827634652382,7.94854621431967,7.38783617816726,6.13846564754534,7.2820315357404,7.52335782826451,14.2392029424629,5.84829021113521,10.7435527024149,4.78220830172108,3.75005412503176,3.47801753430632
|phase1_expression=7.8472935081349,1.04692622291808,0.454999239389536,3.32710632437513,4.50806156951712,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.607425802169478,0,0,0,0,6.54833334163237,0.0992909512008853,0,0.799962113967033,0.22940928106717,0,0.430761996159075,1.29282739611533,0.760093677825496,3.2763916868791,1.10865255327652,0,0,0,3.46621943701529,4.82080471539628,3.47087905646027,0,0,0,0,0,0,6.04304726282771,6.18399280439039,6.42413632565885,29.7308710852255,10.0291571935005,20.8701873597748,12.6379434398284,8.81914456239784,17.2503077237966,0,0,0,3.60163210450326,7.44986943840768,10.8291139378263,35.0007477287104,22.2176211294254,38.0298842103708,14.2314703469035,8.00365316500025,1.7997994345628,0,2.1314403448383,21.2716078468067,20.3635701820424,19.4936471139938,20.1158848114219,22.9254207873006,27.7081454871689,17.6694832761291,17.7611658861683,17.2521847832825,31.2534387447407,20.9220173898839,22.7283461791634,19.0472101237742,36.6643879889939,27.7207560115301,31.2548022334056,14.5175159480718,9.56696437053856,15.8910177687883,22.6864010814724,18.2235751422852,30.383109669524,3.55913108665965,6.19686792875641,5.79728977403356,6.88339101585109,4.0798280022465,7.55584468292944,14.9448576012964,5.37632264516803,4.21333260395256,6.98764322570037,5.71529210126311,6.36011234118612,7.60554466794075,0,0,0,0.432982082022428,1.52015919285059,0,6.2801133845483,0.776813650941515,9.05497048295431,5.20455980298408,10.3518262626128,11.761390360059,8.44046787094686,8.81915303517786,15.3313241422204,0.988779870937496,5.63937491987655,0.884610551949874,7.117741397686,3.3126227769059,1.93950101254089,9.31958806090611,19.3235326027621,28.065858713003,7.40825460104915,0.11981512450592,0,0,21.2702707954848,18.7575247155637,43.6020601831639,27.1165939499951,21.2243829584174,20.1554403222773,20.9291229357407,9.26738211037878,3.11017426525233,0.758168275301024,3.57751155007006,7.026503919986,5.74755261083682,8.82304436046211,6.17889753126432,10.8178033650611,7.81493693737584,9.18276900685342,7.24369438069244,5.6047678162539,8.69887968771969,9.85326295318113,8.76782929710299,5.00485048606076,8.00979983000983,3.08673204611915,6.36909653819178,0,0.257347907114715,0,3.93538967817454,3.75241695969754,2.16074473753218,3.07768156260773,2.55793501271625,2.00547246753592,1.62773761325285,1.3413670069981,2.10177616260905,1.6455984991348,1.47750717671186,1.29710095273369,0.584799949701329,0.878200461164203,2.14730270016595,21.6598647021051,33.649808248026,7.93005079161115,6.08236303326152,8.74481827194459,6.0381534683714,8.37638498593607,4.63872106633688,4.89231696458715,4.37518940058886,4.2707615539006,3.45867804920423,3.01602250560323,5.17286827306992,4.28920991662064,3.59527763461689,5.18731319699266,8.16479220342906,7.58671603812327,5.48392860526698,7.88954149711563,11.8117770150282,8.14600446104028,12.0633610211348,9.48548056863859,7.38050739898011,11.6179058602617,11.4759362447274,2.66807364378434,3.50374722003798,2.94838492669805,2.24862112384854,5.47722327748958,5.06472035480075,5.34714288740982,9.20627639842594,9.40384315295205,5.21666685057355,27.3159592401974,11.1642284300551,12.793544597697,16.4176270665623,12.5578189465339,8.68398338454061,4.98833613449833,4.73728529426212,7.82231886921724,4.07388205860452,6.33663670378956,6.86775655511445,7.61739650835244,7.21994497073856,3.78324345854858,6.42247599981447,7.33491935824441,2.62181303545181,4.48980952851328,7.23245292907558,0,0,1.96705709207614,1.93155722413313,16.5367107687426,16.175212749724,10.0000316679772,6.05930225290495,6.62567260774139,5.46614242015294,5.17016154558717,5.01834475700359,6.46116154838943,9.90767857760913,3.64329631507405,7.3063964477828,6.32460444714438,20.8858855674175,6.95506417520516,12.4645922567079,13.0309567482861,11.0529982391599,7.96470830039777,7.76898035695941,6.04647113929502,2.64047111658257,4.13422650033082,7.68587869859819,5.42699415653264,5.81653967164009,6.06045543254026,6.0046984007805,6.32511651449993,11.3449097573006,17.3624198934432,7.92268813737765,9.31382523235832,12.8602221018955,11.7044554203901,11.5939731441346,11.1893334009442,21.0080814889074,1.17335854031855,1.69465656691056,1.54369878638473,7.4198813823666,3.22928853391811,3.73940134554566,2.50681922406587,3.11867709515616,2.91480836629851,18.17167959703,0.683483523191411,6.60437977482312,3.51869602002452,0.753473828018764,1.23024804948923,0.228778173206523,0,0,0.138199973804424,6.68269432610579,8.22473583310952,9.35269548783504,7.34436317588249,8.36353184057875,6.33251434863915,5.93403124093211,7.43881101528023,6.02038666563268,22.9418502726473,3.72803587852155,0,5.38259565758324,3.80554528051325,9.52810822885833,8.00790905561933,6.25137664315879,5.98521917093345,7.16124116641726,3.8797957437513,2.17425708743405,1.44015003128933,0.316011120628178,4.66267995167378,1.74608627180206,0.389762468933385,0.179026695667481,0.79472541912506,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0.0974578807397524,0.192423683280659,0,4.98806843953465,1.99787358036658,0.897138566094757,2.01461539636894,15.8415467106396,8.63339387075437,8.97442958909599,5.35920947697665,1.00314420807073,36.1441179274923,29.9211403729665,27.498984645091,36.9484342038928,17.8121455140367,29.4603619981983,23.6257875081132,19.8141329418657,18.5788387683524,27.9590568345983,3.84013186061454,10.3746467084268,6.65861062441123,7.05009479498053,7.96530017986333,6.98605332110054,5.55616819504038,7.2112270033613,4.81378814387723,7.83361356467772,7.60437899670719,6.03604292435444,8.24045265734965,7.61899313617944,8.84506221916444,7.1444053692461,7.18482820858104,10.9958255664312,7.00546031365621,6.03515572551029,5.48590803816665,6.38912902173615,6.67621331852499,9.30217066446903,7.81107857447244,6.76916863133412,5.3049112133104,7.62902163169744,6.65440157844723,8.97827634652382,7.94854621431967,7.38783617816726,6.13846564754534,7.2820315357404,7.52335782826451,14.2392029424629,5.84829021113521,10.7435527024149,4.78220830172108,3.75005412503176,3.47801753430632
|short_description=p1@Lrfn3
}}
}}

Latest revision as of 14:29, 26 September 2015

Short description:p1@Lrfn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrfn3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -318bp_to_ENSMUST00000046351, NM_175478, uc009gee.1_5end
EntrezGene:Lrfn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrfn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B729.73
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C335.00
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C738.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C821.27
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.12
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D631.25
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.38
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F96.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D79.05
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F58.44
adrenal gland, neonate N00.CNhs11191.1311-23C18.82
adrenal gland, neonate N25.CNhs11223.1377-27I315.33
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H15.64
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I228.07
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.27
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F143.60
cortex, adult.CNhs10473.12-14D527.12
cortex, neonate N30.CNhs11107.1392-42F221.22
diencephalon, adult.CNhs10482.20-12F220.16
diencephalon, neonate N30.CNhs11201.1388-42B220.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C98.82
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C610.82
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G89.18
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H28.70
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A88.77
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E821.66
hippocampus, neonate N00.CNhs11228.627-43G133.65
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I58.74
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D88.38
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I211.81
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G712.06
kidney, neonate N10.CNhs11206.758-6D59.49
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F311.62
kidney, neonate N30.CNhs11203.1385-42H111.48
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F49.40
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H112.56
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F87.82
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E67.33
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C216.54
medulla oblongata, neonate N30.CNhs11200.1396-42A316.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I413.03
oviduct, adult pregnant day01.CNhs10500.988-6G611.05
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C79.31
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B911.70
pituitary gland, embryo E16.CNhs11036.449-43F611.59
pituitary gland, embryo E17.CNhs11039.1265-44F511.19
pituitary gland, neonate N00.CNhs11190.1308-22E921.01
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H33.74
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C918.17
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E38.22
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D47.34
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I122.94
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I58.01
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B75.99
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E415.84
uterus, adult pregnant day19.CNhs10497.590-15F58.63
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.14
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D736.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.65e-1323
neuroblast (sensu Vertebrata)2.65e-1323
ectodermal cell4.57e-1344
neurectodermal cell4.57e-1344
neural cell4.87e-1343
neuron1.66e-1033
neuronal stem cell1.66e-1033
neuroblast1.66e-1033
electrically signaling cell1.66e-1033
electrically responsive cell9.56e-1039
electrically active cell9.56e-1039

Uber anatomy
Ontology termp-valuen
central nervous system2.33e-3173
nervous system2.14e-3075
regional part of nervous system6.89e-2954
neural tube1.36e-2752
neural rod1.36e-2752
future spinal cord1.36e-2752
neural keel1.36e-2752
neurectoderm2.73e-2564
neural plate2.73e-2564
presumptive neural plate2.73e-2564
brain1.42e-2447
future brain1.42e-2447
ectoderm-derived structure1.82e-2495
ectoderm1.82e-2495
presumptive ectoderm1.82e-2495
regional part of brain5.40e-2446
ecto-epithelium2.49e-2173
anterior neural tube6.19e-2140
regional part of forebrain2.40e-2039
forebrain2.40e-2039
future forebrain2.40e-2039
gray matter1.01e-1934
pre-chordal neural plate1.02e-1949
brain grey matter7.18e-1729
regional part of telencephalon7.18e-1729
telencephalon7.18e-1729
structure with developmental contribution from neural crest1.12e-1692
tube2.00e-13114
cerebral cortex9.89e-1321
cerebral hemisphere9.89e-1321
pallium9.89e-1321
anatomical conduit1.09e-12122
regional part of cerebral cortex1.31e-1017
occipital lobe3.60e-0710
visual cortex3.60e-0710
neocortex3.60e-0710
posterior neural tube3.98e-0712
chordal neural plate3.98e-0712
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