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FFCP PHASE1:Mm9::chr9:42752562..42752593,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:42752562..42752593,-
|DHSsupport=NA
|short_description=p1@Grik4
|DPIdataset=NA
|description=CAGE_peak_1_at_Grik4_5end
|association_with_transcript=0bp_to_ENSMUST00000114865_5end
|EntrezGene=110637
|EntrezGene=110637
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BMF5
|UniProt=Q8BMF5
|association_with_transcript=0bp_to_ENSMUST00000114865_5end
|cluster_id=chr9:42752562..42752593,-
|description=CAGE_peak_1_at_Grik4_5end
|id=chr9:42752562..42752593,-
|ontology_enrichment_celltype=CL:0000540!2.38e-12!33;CL:0000047!2.38e-12!33;CL:0000031!2.38e-12!33;CL:0000404!2.38e-12!33;CL:0002319!2.67e-09!43;CL:0000221!4.20e-09!44;CL:0000133!4.20e-09!44;CL:0000117!4.65e-09!23;CL:0000337!4.65e-09!23;CL:0000393!6.88e-08!39;CL:0000211!6.88e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,1.88e-11,33;CL:0000047,1.88e-11,33;CL:0000031,1.88e-11,33;CL:0000404,1.88e-11,33;CL:0000117,1.89e-08,23;CL:0000337,1.89e-08,23;CL:0002319,2.44e-08,43;CL:0000393,3.18e-08,39;CL:0000211,3.18e-08,39;CL:0000221,6.23e-08,44;CL:0000133,6.23e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.90e-26!73;UBERON:0005743!5.90e-26!73;UBERON:0000073!1.88e-25!75;UBERON:0001016!1.88e-25!75;UBERON:0004121!9.63e-22!102;UBERON:0000924!9.63e-22!102;UBERON:0006601!9.63e-22!102;UBERON:0002346!3.54e-20!71;UBERON:0003075!3.54e-20!71;UBERON:0007284!3.54e-20!71;UBERON:0001049!8.16e-19!52;UBERON:0005068!8.16e-19!52;UBERON:0006241!8.16e-19!52;UBERON:0007135!8.16e-19!52;UBERON:0000955!3.56e-17!50;UBERON:0006238!3.56e-17!50;UBERON:0002616!6.63e-17!49;UBERON:0000033!8.96e-16!63;UBERON:0003056!4.35e-14!49;UBERON:0003080!1.04e-13!40;UBERON:0002020!2.03e-13!34;UBERON:0002780!5.02e-13!39;UBERON:0001890!5.02e-13!39;UBERON:0006240!5.02e-13!39;UBERON:0002791!1.16e-10!29;UBERON:0003528!1.16e-10!29;UBERON:0001893!1.16e-10!29;UBERON:0000468!8.47e-09!333;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.62e-27,73;UBERON:0001016,6.18e-26,75;UBERON:0004121,2.98e-21,95;UBERON:0000924,2.98e-21,95;UBERON:0006601,2.98e-21,95;UBERON:0000073,1.24e-20,54;UBERON:0002346,3.13e-20,64;UBERON:0003075,3.13e-20,64;UBERON:0007284,3.13e-20,64;UBERON:0001049,2.38e-19,52;UBERON:0005068,2.38e-19,52;UBERON:0006241,2.38e-19,52;UBERON:0007135,2.38e-19,52;UBERON:0010371,5.24e-16,73;UBERON:0000955,2.48e-15,47;UBERON:0006238,2.48e-15,47;UBERON:0002616,5.40e-15,46;UBERON:0002020,1.44e-14,34;UBERON:0003056,1.14e-13,49;UBERON:0003080,2.33e-13,40;UBERON:0002780,1.50e-12,39;UBERON:0001890,1.50e-12,39;UBERON:0006240,1.50e-12,39;UBERON:0003528,3.78e-11,29;UBERON:0002791,3.78e-11,29;UBERON:0001893,3.78e-11,29;UBERON:0010314,3.99e-10,92;UBERON:0002021,2.68e-09,10;UBERON:0000411,2.68e-09,10;UBERON:0001950,2.68e-09,10;UBERON:0002619,2.22e-07,17;UBERON:0002420,6.40e-07,8;UBERON:0007245,6.40e-07,8;UBERON:0010009,6.40e-07,8;UBERON:0010011,6.40e-07,8;UBERON:0000454,6.40e-07,8;UBERON:0003076,6.46e-07,12;UBERON:0003057,6.46e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,4.7609188134483,3.1691570175309,0,0,0,0,0,2.99600110518405,5.37905627450176,0.622137673850866,0.945041568321835,0.210324961351382,5.42736870367227,4.63823935998388,0.61245399607477,0.958454710182364,1.83843757322004,3.30347642998166,8.04430229936683,8.75557239560588,4.2203612073662,4.66586982372289,4.16730696445408,5.58365998002762,3.93933827022176,9.16789486660861,9.1334861496837,8.39992916714707,4.10078780815661,0.227178579999552,0.604572480854284,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,1.48442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0.60289056221049,1.41106448562846,0.502666365318702,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,9.07620470735796,5.86450779077674,0,0,0,0,15.5782264981016,9.60751265919116,4.39790232395025,11.6462294528825,8.43861009190091,13.714010940931,6.97637431191358,0.305518091550949,0.124406970610093,1.26361379216837,0.210441855886474,1.82168620147785,0.229902104433473,1.0803727788321,1.9591626318643,1.76894897793452,1.0249097622788,1.49922759295566,1.29351685369508,1.94011193639558,1.89106080167819,2.63926686245923,1.31517439456545,0.834141747676794,0,0.61734640922383,3.18454826909589,0,0,0,0,0.469052119962192,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,16.4026159880019,10.5991750750663,0.330418782983798,0,1.49301775374664,4.18026009348789,3.60828891701861,2.01683524623343,2.2237804384487,0.570676878337677,0,0.494096864172033,1.00534083520108,1.1937388322469,0,0.898819408654221,0.432276099749388,0.199141273254367,2.84501851429623,3.88444942873078,2.25415471346161,2.8511185898344,2.32742984601151,2.45475369616115,0.189709611372772,0.295220295959204,0,0,0.296452627087149,0.667380422864376,0.393117990226406,0,0.202860121388503,0.72353147925725,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0,1.51593129416388,3.42226450528254,5.09235257325564,2.58159273117352,1.00503754465089,0.952174563544055,0,2.36452716159286,2.43611158613652,1.59454768657487,0.655453258862952,1.55416483679306,0.723245292907558,0,0,0,0,12.0412942490844,6.56385444916338,0,0.504941854408746,3.47059041357882,0.780877488593277,3.66219776145758,4.30143836314594,6.01556420022464,9.05844898524264,2.42886421004937,2.04579100537918,2.76701444562566,1.92792789853084,0.99358059645788,0.534196811001766,0.488660878060728,1.31976098378028,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,3.06395645178409,1.98067203434441,0.905510786479282,0.857348140126369,3.19212420556092,0.356737635204141,1.81003922662333,1.522324745573,0.23467170806371,0,0.220528398054962,0.16488625294148,1.13025098687134,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,14.8340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.58167996790568,0.813277868507395,1.29606408986162,0.836353184057875,0.218362563746178,0.269728692769641,0.909188012978695,0,0,0,0,0.448549638131936,0.330916980914195,1.16670713006429,0.129159823477731,0.168956125490778,0.938857909166032,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0,0.810900861160657,0.924398614483445,0.25984164595559,0.537080087002444,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.772758376128762,0.187682475451182,1.64836461840539,0.857473516316263,2.00628841614145,10.1655331671072,7.82552902062201,10.3121192419091,9.6237782112465,6.85082519770642,3.7769694869485,4.72515750162264,12.158672487054,7.25027854374727,10.3552062350364,0.830298780673413,5.1873233542134,2.04880326904961,0.972426868273176,0.419226325255965,0.183843508450014,2.889207461421,1.44224540067226,2.24643446714271,2.02157769411038,2.5347929989024,1.50901073108861,1.12369808963859,1.72867911493147,1.60819313075717,1.90517476513229,2.31768651889711,2.31491064556446,1.64834360321323,1.47198920134397,1.02860775715625,1.95223386775271,1.43061713968393,1.16277133305863,1.2234219453993,1.35383372626682,1.82927972872773,0.263069711437843,1.08643291076689,2.24456908663095,1.30498519936592,0.985044823755635,3.27384834535751,0.77468420592983,1.92906610981141,2.74791635731741,2.10538447600868,1.07435527024149,1.91288332068843,0.441182838239031,1.15933917810211
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,4.7609188134483,3.1691570175309,0,0,0,0,0,2.99600110518405,5.37905627450176,0.622137673850866,0.945041568321835,0.210324961351382,5.42736870367227,4.63823935998388,0.61245399607477,0.958454710182364,1.83843757322004,3.30347642998166,8.04430229936683,8.75557239560588,4.2203612073662,4.66586982372289,4.16730696445408,5.58365998002762,3.93933827022176,9.16789486660861,9.1334861496837,8.39992916714707,4.10078780815661,0.227178579999552,0.604572480854284,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,1.48442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0.60289056221049,1.41106448562846,0.502666365318702,0.247194967734374,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,9.07620470735796,5.86450779077674,0,0,0,0,15.5782264981016,9.60751265919116,4.39790232395025,11.6462294528825,8.43861009190091,13.714010940931,6.97637431191358,0.305518091550949,0.124406970610093,1.26361379216837,0.210441855886474,1.82168620147785,0.229902104433473,1.0803727788321,1.9591626318643,1.76894897793452,1.0249097622788,1.49922759295566,1.29351685369508,1.94011193639558,1.89106080167819,2.63926686245923,1.31517439456545,0.834141747676794,0,0.61734640922383,3.18454826909589,0,0,0,0,0.469052119962192,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,16.4026159880019,10.5991750750663,0.330418782983798,0,1.49301775374664,4.18026009348789,3.60828891701861,2.01683524623343,2.2237804384487,0.570676878337677,0,0.494096864172033,1.00534083520108,1.1937388322469,0,0.898819408654221,0.432276099749388,0.199141273254367,2.84501851429623,3.88444942873078,2.25415471346161,2.8511185898344,2.32742984601151,2.45475369616115,0.189709611372772,0.295220295959204,0,0,0.296452627087149,0.667380422864376,0.393117990226406,0,0.202860121388503,0.72353147925725,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0,1.51593129416388,3.42226450528254,5.09235257325564,2.58159273117352,1.00503754465089,0.952174563544055,0,2.36452716159286,2.43611158613652,1.59454768657487,0.655453258862952,1.55416483679306,0.723245292907558,0,0,0,0,12.0412942490844,6.56385444916338,0,0.504941854408746,3.47059041357882,0.780877488593277,3.66219776145758,4.30143836314594,6.01556420022464,9.05844898524264,2.42886421004937,2.04579100537918,2.76701444562566,1.92792789853084,0.99358059645788,0.534196811001766,0.488660878060728,1.31976098378028,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.316036757935816,0,0,3.06395645178409,1.98067203434441,0.905510786479282,0.857348140126369,3.19212420556092,0.356737635204141,1.81003922662333,1.522324745573,0.23467170806371,0,0.220528398054962,0.16488625294148,1.13025098687134,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,14.8340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.58167996790568,0.813277868507395,1.29606408986162,0.836353184057875,0.218362563746178,0.269728692769641,0.909188012978695,0,0,0,0,0.448549638131936,0.330916980914195,1.16670713006429,0.129159823477731,0.168956125490778,0.938857909166032,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0,0.810900861160657,0.924398614483445,0.25984164595559,0.537080087002444,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.772758376128762,0.187682475451182,1.64836461840539,0.857473516316263,2.00628841614145,10.1655331671072,7.82552902062201,10.3121192419091,9.6237782112465,6.85082519770642,3.7769694869485,4.72515750162264,12.158672487054,7.25027854374727,10.3552062350364,0.830298780673413,5.1873233542134,2.04880326904961,0.972426868273176,0.419226325255965,0.183843508450014,2.889207461421,1.44224540067226,2.24643446714271,2.02157769411038,2.5347929989024,1.50901073108861,1.12369808963859,1.72867911493147,1.60819313075717,1.90517476513229,2.31768651889711,2.31491064556446,1.64834360321323,1.47198920134397,1.02860775715625,1.95223386775271,1.43061713968393,1.16277133305863,1.2234219453993,1.35383372626682,1.82927972872773,0.263069711437843,1.08643291076689,2.24456908663095,1.30498519936592,0.985044823755635,3.27384834535751,0.77468420592983,1.92906610981141,2.74791635731741,2.10538447600868,1.07435527024149,1.91288332068843,0.441182838239031,1.15933917810211
|short_description=p1@Grik4
}}
}}

Latest revision as of 16:08, 26 September 2015

Short description:p1@Grik4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grik4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000114865_5end
EntrezGene:Grik4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grik4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G110.60
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.88e-1133
neuronal stem cell1.88e-1133
neuroblast1.88e-1133
electrically signaling cell1.88e-1133
CNS neuron (sensu Vertebrata)1.89e-0823
neuroblast (sensu Vertebrata)1.89e-0823
neural cell2.44e-0843
electrically responsive cell3.18e-0839
electrically active cell3.18e-0839
ectodermal cell6.23e-0844
neurectodermal cell6.23e-0844

Uber anatomy
Ontology termp-valuen
central nervous system2.62e-2773
nervous system6.18e-2675
ectoderm-derived structure2.98e-2195
ectoderm2.98e-2195
presumptive ectoderm2.98e-2195
regional part of nervous system1.24e-2054
neurectoderm3.13e-2064
neural plate3.13e-2064
presumptive neural plate3.13e-2064
neural tube2.38e-1952
neural rod2.38e-1952
future spinal cord2.38e-1952
neural keel2.38e-1952
ecto-epithelium5.24e-1673
brain2.48e-1547
future brain2.48e-1547
regional part of brain5.40e-1546
gray matter1.44e-1434
pre-chordal neural plate1.14e-1349
anterior neural tube2.33e-1340
regional part of forebrain1.50e-1239
forebrain1.50e-1239
future forebrain1.50e-1239
brain grey matter3.78e-1129
regional part of telencephalon3.78e-1129
telencephalon3.78e-1129
structure with developmental contribution from neural crest3.99e-1092
occipital lobe2.68e-0910
visual cortex2.68e-0910
neocortex2.68e-0910
regional part of cerebral cortex2.22e-0717
basal ganglion6.40e-078
nuclear complex of neuraxis6.40e-078
aggregate regional part of brain6.40e-078
collection of basal ganglia6.40e-078
cerebral subcortex6.40e-078
posterior neural tube6.46e-0712
chordal neural plate6.46e-0712
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