FFCP PHASE1:Mm9::chr17:56148922..56148946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68047 | |EntrezGene=68047 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=244bp_to_ENSMUST00000124302_5end | |association_with_transcript=244bp_to_ENSMUST00000124302_5end | ||
|cluster_id=chr17:56148922..56148946,+ | |||
|description=CAGE_peak_4_at_Mpnd_5end | |description=CAGE_peak_4_at_Mpnd_5end | ||
|id=chr17:56148922..56148946,+ | |id=chr17:56148922..56148946,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.57e-16!50;CL:0002319!4.76e-14!43;CL:0002321!3.38e-13!70;CL:0000220!3.38e-13!70;CL:0000221!4.21e-13!44;CL:0000133!4.21e-13!44;CL:0000393!8.33e-12!39;CL:0000211!8.33e-12!39;CL:0000548!1.70e-09!115;CL:0000004!1.70e-09!115;CL:0000255!1.70e-09!115;CL:0000540!2.55e-09!33;CL:0000047!2.55e-09!33;CL:0000031!2.55e-09!33;CL:0000404!2.55e-09!33;CL:0000117!3.33e-09!23;CL:0000337!3.33e-09!23;CL:0002371!6.46e-09!118;CL:0000144!2.31e-08!121;CL:0000012!2.31e-08!121 | |ontology_enrichment_celltype=CL:0000055!9.57e-16!50;CL:0002319!4.76e-14!43;CL:0002321!3.38e-13!70;CL:0000220!3.38e-13!70;CL:0000221!4.21e-13!44;CL:0000133!4.21e-13!44;CL:0000393!8.33e-12!39;CL:0000211!8.33e-12!39;CL:0000548!1.70e-09!115;CL:0000004!1.70e-09!115;CL:0000255!1.70e-09!115;CL:0000540!2.55e-09!33;CL:0000047!2.55e-09!33;CL:0000031!2.55e-09!33;CL:0000404!2.55e-09!33;CL:0000117!3.33e-09!23;CL:0000337!3.33e-09!23;CL:0002371!6.46e-09!118;CL:0000144!2.31e-08!121;CL:0000012!2.31e-08!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.43e-16,70;CL:0002319,3.01e-15,43;CL:0000221,1.05e-14,44;CL:0000133,1.05e-14,44;CL:0000393,7.56e-12,39;CL:0000211,7.56e-12,39;CL:0000117,3.32e-10,23;CL:0000337,3.32e-10,23;CL:0000333,5.29e-09,10;CL:0000095,5.29e-09,10;CL:0000243,5.29e-09,10;CL:0000123,5.29e-09,10;CL:0000125,5.29e-09,10;CL:0000030,5.29e-09,10;CL:0000339,5.29e-09,10;CL:0000723,1.24e-08,91;CL:0000048,1.24e-08,91;CL:0000540,1.59e-08,33;CL:0000047,1.59e-08,33;CL:0000031,1.59e-08,33;CL:0000404,1.59e-08,33;CL:0002453,1.38e-07,8;CL:0000034,1.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.67e-19!75;UBERON:0001016!4.67e-19!75;UBERON:0001017!3.55e-18!73;UBERON:0005743!3.55e-18!73;UBERON:0002020!4.83e-14!34;UBERON:0004121!2.37e-13!102;UBERON:0000924!2.37e-13!102;UBERON:0006601!2.37e-13!102;UBERON:0001049!5.27e-13!52;UBERON:0005068!5.27e-13!52;UBERON:0006241!5.27e-13!52;UBERON:0007135!5.27e-13!52;UBERON:0000955!5.38e-12!50;UBERON:0006238!5.38e-12!50;UBERON:0002616!7.55e-12!49;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0002346!4.05e-10!71;UBERON:0003075!4.05e-10!71;UBERON:0007284!4.05e-10!71;UBERON:0000033!3.92e-09!63;UBERON:0003080!6.05e-09!40;UBERON:0002780!1.08e-08!39;UBERON:0001890!1.08e-08!39;UBERON:0006240!1.08e-08!39;UBERON:0002619!4.19e-08!17;UBERON:0000956!5.06e-08!21;UBERON:0001869!5.06e-08!21;UBERON:0000203!5.06e-08!21;UBERON:0003056!9.98e-08!49 | |ontology_enrichment_uberon=UBERON:0000073!4.67e-19!75;UBERON:0001016!4.67e-19!75;UBERON:0001017!3.55e-18!73;UBERON:0005743!3.55e-18!73;UBERON:0002020!4.83e-14!34;UBERON:0004121!2.37e-13!102;UBERON:0000924!2.37e-13!102;UBERON:0006601!2.37e-13!102;UBERON:0001049!5.27e-13!52;UBERON:0005068!5.27e-13!52;UBERON:0006241!5.27e-13!52;UBERON:0007135!5.27e-13!52;UBERON:0000955!5.38e-12!50;UBERON:0006238!5.38e-12!50;UBERON:0002616!7.55e-12!49;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0002346!4.05e-10!71;UBERON:0003075!4.05e-10!71;UBERON:0007284!4.05e-10!71;UBERON:0000033!3.92e-09!63;UBERON:0003080!6.05e-09!40;UBERON:0002780!1.08e-08!39;UBERON:0001890!1.08e-08!39;UBERON:0006240!1.08e-08!39;UBERON:0002619!4.19e-08!17;UBERON:0000956!5.06e-08!21;UBERON:0001869!5.06e-08!21;UBERON:0000203!5.06e-08!21;UBERON:0003056!9.98e-08!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.42e-20,75;UBERON:0001017,3.65e-19,73;UBERON:0000073,4.52e-17,54;UBERON:0002020,1.55e-16,34;UBERON:0001049,3.05e-15,52;UBERON:0005068,3.05e-15,52;UBERON:0006241,3.05e-15,52;UBERON:0007135,3.05e-15,52;UBERON:0004121,1.98e-14,95;UBERON:0000924,1.98e-14,95;UBERON:0006601,1.98e-14,95;UBERON:0003528,1.42e-13,29;UBERON:0002791,1.42e-13,29;UBERON:0001893,1.42e-13,29;UBERON:0002616,8.05e-12,46;UBERON:0002346,1.87e-11,64;UBERON:0003075,1.87e-11,64;UBERON:0007284,1.87e-11,64;UBERON:0000955,2.11e-11,47;UBERON:0006238,2.11e-11,47;UBERON:0002619,1.71e-10,17;UBERON:0002780,1.99e-10,39;UBERON:0001890,1.99e-10,39;UBERON:0006240,1.99e-10,39;UBERON:0003080,5.30e-10,40;UBERON:0010371,9.56e-10,73;UBERON:0000956,3.56e-09,21;UBERON:0001869,3.56e-09,21;UBERON:0000203,3.56e-09,21;UBERON:0002021,1.24e-07,10;UBERON:0000411,1.24e-07,10;UBERON:0001950,1.24e-07,10;UBERON:0010314,1.91e-07,92;UBERON:0003056,5.14e-07,49 | |||
|phase1_expression=0.160148847104794,0.697950815278722,1.81999695755814,2.41971369045464,3.00537437967808,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0.513653904676515,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.340173160604279,0.794327609607082,1.82839852397255,0.799962113967033,0.45881856213434,0.57423196411502,0.430761996159075,1.29282739611533,1.33016393619462,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0.408338712524738,1.25559489221072,0,0,0,0.683045484958446,0.971020706062307,1.6366586336825,1.01376931219515,0.550640256485045,0.782391344348039,2.18025156380447,4.83309602015838,3.88859798148567,1.53985063787899,1.43752564364972,0.167782606057736,0,0.336093799142464,3.34437266846731,3.15186783932632,3.09403255366465,0.809265843438391,0.528990979272033,1.26766280701236,2.37191172448392,0.889294796111139,2.2497492932035,0.988866362566974,2.1314403448383,4.79360176829448,4.61061966385865,0.414758449233911,0.810035629990144,0.210324961351382,2.85650984403804,2.42955395046775,0.857435594504678,1.0543001812006,1.83843757322004,2.20231761998777,1.78762273319263,2.76491759861238,2.37395317914349,2.47016637726506,3.64639359389732,2.23346399201105,4.50210088025344,1.98637722109853,2.06240009831567,0.854230084794618,1.67759501242771,1.59025005999687,1.5870027622425,0.289864488701678,0,0.679971333707751,1.07940638327563,0,0.896053774194671,0.280888840263504,2.55645483867087,2.85764605063156,3.88673531961374,0,0,0,0,1.5154372870785,1.77351905832569,0,0.45673551887624,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.452167921657868,0.23517741427141,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,0.209446706813455,1.02182822083437,0.239630249011841,0.599902730993408,0,0.898743836428936,0.915001205637253,0.628271760564322,2.08589184230732,1.79000820131231,1.24672826735736,1.62241263067758,0,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0.720248519221397,0.753524089178575,0.0680364991513279,0.512454881139399,0.281105173679186,0.776110112217047,0.215567992932842,0.378212160335639,0,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,0.465067889500816,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,2.3131894342054,0.720332286654991,0,0.528901133327089,0,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0.189491411770485,0,0.509235257325564,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,1.50791283939272,2.17562273527484,1.96705709207614,0.551873492609465,2.0871576698413,1.75817529888305,0.327869890753351,0.757412781613119,0,0.390438744296638,1.29254038639679,1.91175038362042,0.891194696329576,0.849229592366497,0.809621403349789,0.584511715822624,1.58115111178609,0.642642632843614,0.141940085208269,0.35613120733451,0,0.164970122972535,5.30980553359851,0.242780636154981,1.209294227859,2.64047111658257,1.18120757152309,1.53717573971964,0,0.727067458955011,0.712994756769443,1.26414703174326,4.21674434299995,5.15677716240934,0.340439605753788,0.18006109403131,0.258717367565509,0,0.177340233642274,0.891844088010353,0.164549020602121,0,0.704015124191131,0.21183207086382,2.8668691747145,0,0.161464426695906,0.120625849856312,0.358117032009409,0.164140899745061,0.291480836629851,1.66882771809459,0.341741761595705,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0.540026704109006,0.627264888043406,0.218362563746178,0,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0,0,0.513554785824136,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.584747284438515,0.192423683280659,0,0,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,1.6942555278512,1.84130094602871,2.29158205375759,2.06223818812425,0.685082519770642,1.5107877947794,2.02506750069542,1.80128481289688,1.35942722695261,1.55328093525546,0.207574695168353,0.399024873401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| 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| ||
|short_description=p4@Mpnd | |short_description=p4@Mpnd | ||
}} | }} |
Latest revision as of 16:47, 26 September 2015
Short description: | p4@Mpnd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mpnd_5end |
Coexpression cluster: | NA |
Association with transcript: | 244bp_to_ENSMUST00000124302_5end |
EntrezGene: | Mpnd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.43e-16 | 70 |
neural cell | 3.01e-15 | 43 |
ectodermal cell | 1.05e-14 | 44 |
neurectodermal cell | 1.05e-14 | 44 |
electrically responsive cell | 7.56e-12 | 39 |
electrically active cell | 7.56e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.32e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.32e-10 | 23 |
migratory neural crest cell | 5.29e-09 | 10 |
neuron associated cell | 5.29e-09 | 10 |
glial cell (sensu Vertebrata) | 5.29e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 5.29e-09 | 10 |
glial cell | 5.29e-09 | 10 |
glioblast | 5.29e-09 | 10 |
glioblast (sensu Vertebrata) | 5.29e-09 | 10 |
somatic stem cell | 1.24e-08 | 91 |
multi fate stem cell | 1.24e-08 | 91 |
neuron | 1.59e-08 | 33 |
neuronal stem cell | 1.59e-08 | 33 |
neuroblast | 1.59e-08 | 33 |
electrically signaling cell | 1.59e-08 | 33 |
oligodendrocyte precursor cell | 1.38e-07 | 8 |
stem cell | 1.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.42e-20 | 75 |
central nervous system | 3.65e-19 | 73 |
regional part of nervous system | 4.52e-17 | 54 |
gray matter | 1.55e-16 | 34 |
neural tube | 3.05e-15 | 52 |
neural rod | 3.05e-15 | 52 |
future spinal cord | 3.05e-15 | 52 |
neural keel | 3.05e-15 | 52 |
ectoderm-derived structure | 1.98e-14 | 95 |
ectoderm | 1.98e-14 | 95 |
presumptive ectoderm | 1.98e-14 | 95 |
brain grey matter | 1.42e-13 | 29 |
regional part of telencephalon | 1.42e-13 | 29 |
telencephalon | 1.42e-13 | 29 |
regional part of brain | 8.05e-12 | 46 |
neurectoderm | 1.87e-11 | 64 |
neural plate | 1.87e-11 | 64 |
presumptive neural plate | 1.87e-11 | 64 |
brain | 2.11e-11 | 47 |
future brain | 2.11e-11 | 47 |
regional part of cerebral cortex | 1.71e-10 | 17 |
regional part of forebrain | 1.99e-10 | 39 |
forebrain | 1.99e-10 | 39 |
future forebrain | 1.99e-10 | 39 |
anterior neural tube | 5.30e-10 | 40 |
ecto-epithelium | 9.56e-10 | 73 |
cerebral cortex | 3.56e-09 | 21 |
cerebral hemisphere | 3.56e-09 | 21 |
pallium | 3.56e-09 | 21 |
occipital lobe | 1.24e-07 | 10 |
visual cortex | 1.24e-07 | 10 |
neocortex | 1.24e-07 | 10 |
structure with developmental contribution from neural crest | 1.91e-07 | 92 |
pre-chordal neural plate | 5.14e-07 | 49 |