FFCP PHASE1:Mm9::chr1:174259448..174259457,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16524|HGNC=|MCL_coexpression_id=2665|UniProt=P48543,Q544N3|association_with_transcript=-54bp_to_ENSMUST00000062387,NM_008429,uc007dqg.1,uc007dqh.1_5end|description=CAGE_peak_2_at_Kcnj9_5end|id=chr1:174259448..174259457,-|ontology_enrichment_celltype=CL:0000117!8.45e-15!23;CL:0000337!8.45e-15!23;CL:0000540!3.82e-10!33;CL:0000047!3.82e-10!33;CL:0000031!3.82e-10!33;CL:0000404!3.82e-10!33;CL:0000393!7.33e-08!39;CL:0000211!7.33e-08!39;CL:0002319!1.26e-07!43;CL:0000221!2.41e-07!44;CL:0000133!2.41e-07!44|ontology_enrichment_celltype_v019_2=CL:0002614,1.45e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.68e-28!52;UBERON:0005068!2.68e-28!52;UBERON:0006241!2.68e-28!52;UBERON:0007135!2.68e-28!52;UBERON:0002020!1.33e-26!34;UBERON:0001017!7.56e-26!73;UBERON:0005743!7.56e-26!73;UBERON:0000073!7.65e-25!75;UBERON:0001016!7.65e-25!75;UBERON:0000955!1.64e-24!50;UBERON:0006238!1.64e-24!50;UBERON:0002616!1.75e-23!49;UBERON:0002346!5.95e-23!71;UBERON:0003075!5.95e-23!71;UBERON:0007284!5.95e-23!71;UBERON:0000033!1.17e-22!63;UBERON:0002791!6.34e-21!29;UBERON:0003528!6.34e-21!29;UBERON:0001893!6.34e-21!29;UBERON:0004121!3.49e-19!102;UBERON:0000924!3.49e-19!102;UBERON:0006601!3.49e-19!102;UBERON:0003056!1.33e-18!49;UBERON:0003080!3.26e-18!40;UBERON:0002780!5.11e-17!39;UBERON:0001890!5.11e-17!39;UBERON:0006240!5.11e-17!39;UBERON:0007811!7.66e-14!86;UBERON:0000956!2.95e-13!21;UBERON:0001869!2.95e-13!21;UBERON:0000203!2.95e-13!21;UBERON:0002619!7.05e-13!17;UBERON:0002021!1.82e-12!10;UBERON:0000411!1.82e-12!10;UBERON:0001950!1.82e-12!10;UBERON:0000153!8.10e-12!94;UBERON:0003076!5.98e-11!12;UBERON:0003057!5.98e-11!12;UBERON:0002298!1.02e-09!6;UBERON:0002420!4.20e-09!8;UBERON:0007245!4.20e-09!8;UBERON:0010009!4.20e-09!8;UBERON:0010011!4.20e-09!8;UBERON:0000454!4.20e-09!8;UBERON:0002240!2.62e-08!6;UBERON:0005174!2.62e-08!6;UBERON:0001137!2.62e-08!6;UBERON:0000025!1.46e-07!114;UBERON:0002950!2.60e-07!4;UBERON:0001891!2.60e-07!4;UBERON:0009616!2.60e-07!4;UBERON:0001948!5.07e-07!5;UBERON:0002315!5.07e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-20,54;UBERON:0002616,1.90e-19,46;UBERON:0001049,5.23e-19,52;UBERON:0005068,5.23e-19,52;UBERON:0006241,5.23e-19,52;UBERON:0007135,5.23e-19,52;UBERON:0000955,5.76e-19,47;UBERON:0006238,5.76e-19,47;UBERON:0002021,1.89e-17,10;UBERON:0000411,1.89e-17,10;UBERON:0001950,1.89e-17,10;UBERON:0001017,4.70e-16,73;UBERON:0003528,5.97e-16,29;UBERON:0002791,5.97e-16,29;UBERON:0001893,5.97e-16,29;UBERON:0001016,1.58e-15,75;UBERON:0003080,4.40e-15,40;UBERON:0002346,8.23e-15,64;UBERON:0003075,8.23e-15,64;UBERON:0007284,8.23e-15,64;UBERON:0002950,8.51e-15,4;UBERON:0001891,8.51e-15,4;UBERON:0009616,8.51e-15,4;UBERON:0010286,8.51e-15,4;UBERON:0002020,2.80e-13,34;UBERON:0002780,2.93e-13,39;UBERON:0001890,2.93e-13,39;UBERON:0006240,2.93e-13,39;UBERON:0002619,8.17e-13,17;UBERON:0010371,1.45e-12,73;UBERON:0003056,7.94e-12,49;UBERON:0002038,1.45e-11,3;UBERON:0009663,1.45e-11,3;UBERON:0009661,1.45e-11,3;UBERON:0000125,1.45e-11,3;UBERON:0002308,1.45e-11,3;UBERON:0004121,1.76e-11,95;UBERON:0000924,1.76e-11,95;UBERON:0006601,1.76e-11,95;UBERON:0000956,3.77e-10,21;UBERON:0001869,3.77e-10,21;UBERON:0000203,3.77e-10,21;UBERON:0010314,2.89e-09,92;UBERON:0002420,2.70e-07,8;UBERON:0007245,2.70e-07,8;UBERON:0010009,2.70e-07,8;UBERON:0010011,2.70e-07,8;UBERON:0000454,2.70e-07,8;UBERON:0000025,8.12e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0,0,1.91531007127782,1.38245879930619,0.527545150920775,1.09785172322892,0.52091337055676,1.67509799400829,3.37657566019008,1.22238598221448,0.294628585473668,0.711858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,3.14170060220183,0,0,0,0,1.49790639404823,0.915001205637253,0,0.869121600961382,1.27857728665165,1.0389402227978,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94585057078933,0,0,0,0,0,0,0,0,2.65742532908607,2.30424005006292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0,3.60256962579376,3.17199686288943,2.07104124700728,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p2@Kcnj9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16524 | |||
|HGNC= | |||
|MCL_coexpression_id=2665 | |||
|TSSclassifier=NA | |||
|UniProt=P48543,Q544N3 | |||
|association_with_transcript=-54bp_to_ENSMUST00000062387,NM_008429,uc007dqg.1,uc007dqh.1_5end | |||
|cluster_id=chr1:174259448..174259457,- | |||
|description=CAGE_peak_2_at_Kcnj9_5end | |||
|id=chr1:174259448..174259457,- | |||
|ontology_enrichment_celltype=CL:0000117!8.45e-15!23;CL:0000337!8.45e-15!23;CL:0000540!3.82e-10!33;CL:0000047!3.82e-10!33;CL:0000031!3.82e-10!33;CL:0000404!3.82e-10!33;CL:0000393!7.33e-08!39;CL:0000211!7.33e-08!39;CL:0002319!1.26e-07!43;CL:0000221!2.41e-07!44;CL:0000133!2.41e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.45e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.68e-28!52;UBERON:0005068!2.68e-28!52;UBERON:0006241!2.68e-28!52;UBERON:0007135!2.68e-28!52;UBERON:0002020!1.33e-26!34;UBERON:0001017!7.56e-26!73;UBERON:0005743!7.56e-26!73;UBERON:0000073!7.65e-25!75;UBERON:0001016!7.65e-25!75;UBERON:0000955!1.64e-24!50;UBERON:0006238!1.64e-24!50;UBERON:0002616!1.75e-23!49;UBERON:0002346!5.95e-23!71;UBERON:0003075!5.95e-23!71;UBERON:0007284!5.95e-23!71;UBERON:0000033!1.17e-22!63;UBERON:0002791!6.34e-21!29;UBERON:0003528!6.34e-21!29;UBERON:0001893!6.34e-21!29;UBERON:0004121!3.49e-19!102;UBERON:0000924!3.49e-19!102;UBERON:0006601!3.49e-19!102;UBERON:0003056!1.33e-18!49;UBERON:0003080!3.26e-18!40;UBERON:0002780!5.11e-17!39;UBERON:0001890!5.11e-17!39;UBERON:0006240!5.11e-17!39;UBERON:0007811!7.66e-14!86;UBERON:0000956!2.95e-13!21;UBERON:0001869!2.95e-13!21;UBERON:0000203!2.95e-13!21;UBERON:0002619!7.05e-13!17;UBERON:0002021!1.82e-12!10;UBERON:0000411!1.82e-12!10;UBERON:0001950!1.82e-12!10;UBERON:0000153!8.10e-12!94;UBERON:0003076!5.98e-11!12;UBERON:0003057!5.98e-11!12;UBERON:0002298!1.02e-09!6;UBERON:0002420!4.20e-09!8;UBERON:0007245!4.20e-09!8;UBERON:0010009!4.20e-09!8;UBERON:0010011!4.20e-09!8;UBERON:0000454!4.20e-09!8;UBERON:0002240!2.62e-08!6;UBERON:0005174!2.62e-08!6;UBERON:0001137!2.62e-08!6;UBERON:0000025!1.46e-07!114;UBERON:0002950!2.60e-07!4;UBERON:0001891!2.60e-07!4;UBERON:0009616!2.60e-07!4;UBERON:0001948!5.07e-07!5;UBERON:0002315!5.07e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-20,54;UBERON:0002616,1.90e-19,46;UBERON:0001049,5.23e-19,52;UBERON:0005068,5.23e-19,52;UBERON:0006241,5.23e-19,52;UBERON:0007135,5.23e-19,52;UBERON:0000955,5.76e-19,47;UBERON:0006238,5.76e-19,47;UBERON:0002021,1.89e-17,10;UBERON:0000411,1.89e-17,10;UBERON:0001950,1.89e-17,10;UBERON:0001017,4.70e-16,73;UBERON:0003528,5.97e-16,29;UBERON:0002791,5.97e-16,29;UBERON:0001893,5.97e-16,29;UBERON:0001016,1.58e-15,75;UBERON:0003080,4.40e-15,40;UBERON:0002346,8.23e-15,64;UBERON:0003075,8.23e-15,64;UBERON:0007284,8.23e-15,64;UBERON:0002950,8.51e-15,4;UBERON:0001891,8.51e-15,4;UBERON:0009616,8.51e-15,4;UBERON:0010286,8.51e-15,4;UBERON:0002020,2.80e-13,34;UBERON:0002780,2.93e-13,39;UBERON:0001890,2.93e-13,39;UBERON:0006240,2.93e-13,39;UBERON:0002619,8.17e-13,17;UBERON:0010371,1.45e-12,73;UBERON:0003056,7.94e-12,49;UBERON:0002038,1.45e-11,3;UBERON:0009663,1.45e-11,3;UBERON:0009661,1.45e-11,3;UBERON:0000125,1.45e-11,3;UBERON:0002308,1.45e-11,3;UBERON:0004121,1.76e-11,95;UBERON:0000924,1.76e-11,95;UBERON:0006601,1.76e-11,95;UBERON:0000956,3.77e-10,21;UBERON:0001869,3.77e-10,21;UBERON:0000203,3.77e-10,21;UBERON:0010314,2.89e-09,92;UBERON:0002420,2.70e-07,8;UBERON:0007245,2.70e-07,8;UBERON:0010009,2.70e-07,8;UBERON:0010011,2.70e-07,8;UBERON:0000454,2.70e-07,8;UBERON:0000025,8.12e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0,0,1.91531007127782,1.38245879930619,0.527545150920775,1.09785172322892,0.52091337055676,1.67509799400829,3.37657566019008,1.22238598221448,0.294628585473668,0.711858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,3.14170060220183,0,0,0,0,1.49790639404823,0.915001205637253,0,0.869121600961382,1.27857728665165,1.0389402227978,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94585057078933,0,0,0,0,0,0,0,0,2.65742532908607,2.30424005006292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,1.14579102687879,0.68741272937475,1.37016503954128,1.5107877947794,0,3.60256962579376,3.17199686288943,2.07104124700728,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Kcnj9 | |||
}} |
Latest revision as of 20:01, 26 September 2015
Short description: | p2@Kcnj9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnj9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2665 |
Association with transcript: | -54bp_to_ENSMUST00000062387, NM_008429, uc007dqg.1, uc007dqh.1_5end |
EntrezGene: | Kcnj9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.45e-11 | 3 |