FFCP PHASE1:Mm9::chr9:52487835..52487892,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330941 | |EntrezGene=330941 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q32M26,Q8BPR8 | |UniProt=Q32M26,Q8BPR8 | ||
|association_with_transcript=-301bp_to_ENSMUST00000098768,NM_178906,uc009plx.2_5end | |association_with_transcript=-301bp_to_ENSMUST00000098768,NM_178906,uc009plx.2_5end | ||
|cluster_id=chr9:52487835..52487892,- | |||
|description=CAGE_peak_1_at_AI593442_5end | |description=CAGE_peak_1_at_AI593442_5end | ||
|id=chr9:52487835..52487892,- | |id=chr9:52487835..52487892,- | ||
|ontology_enrichment_celltype=CL:0000221!6.21e-14!44;CL:0000133!6.21e-14!44;CL:0002319!8.78e-14!43;CL:0000117!2.15e-12!23;CL:0000337!2.15e-12!23;CL:0000540!4.06e-12!33;CL:0000047!4.06e-12!33;CL:0000031!4.06e-12!33;CL:0000404!4.06e-12!33;CL:0000055!1.79e-09!50;CL:0000393!3.55e-08!39;CL:0000211!3.55e-08!39 | |ontology_enrichment_celltype=CL:0000221!6.21e-14!44;CL:0000133!6.21e-14!44;CL:0002319!8.78e-14!43;CL:0000117!2.15e-12!23;CL:0000337!2.15e-12!23;CL:0000540!4.06e-12!33;CL:0000047!4.06e-12!33;CL:0000031!4.06e-12!33;CL:0000404!4.06e-12!33;CL:0000055!1.79e-09!50;CL:0000393!3.55e-08!39;CL:0000211!3.55e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-15,23;CL:0000337,1.46e-15,23;CL:0000540,1.97e-14,33;CL:0000047,1.97e-14,33;CL:0000031,1.97e-14,33;CL:0000404,1.97e-14,33;CL:0000221,3.42e-14,44;CL:0000133,3.42e-14,44;CL:0002319,5.49e-14,43;CL:0000393,1.11e-10,39;CL:0000211,1.11e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.81e-35!73;UBERON:0005743!7.81e-35!73;UBERON:0000073!1.02e-34!75;UBERON:0001016!1.02e-34!75;UBERON:0000033!5.35e-31!63;UBERON:0004121!5.84e-31!102;UBERON:0000924!5.84e-31!102;UBERON:0006601!5.84e-31!102;UBERON:0002346!2.32e-30!71;UBERON:0003075!2.32e-30!71;UBERON:0007284!2.32e-30!71;UBERON:0001049!4.74e-29!52;UBERON:0005068!4.74e-29!52;UBERON:0006241!4.74e-29!52;UBERON:0007135!4.74e-29!52;UBERON:0000955!1.18e-27!50;UBERON:0006238!1.18e-27!50;UBERON:0002616!5.33e-27!49;UBERON:0003056!3.09e-25!49;UBERON:0003080!8.37e-22!40;UBERON:0002780!4.13e-21!39;UBERON:0001890!4.13e-21!39;UBERON:0006240!4.13e-21!39;UBERON:0002020!5.59e-20!34;UBERON:0002791!1.02e-16!29;UBERON:0003528!1.02e-16!29;UBERON:0001893!1.02e-16!29;UBERON:0007811!2.75e-16!86;UBERON:0000153!4.60e-16!94;UBERON:0000956!7.30e-12!21;UBERON:0001869!7.30e-12!21;UBERON:0000203!7.30e-12!21;UBERON:0002619!4.79e-11!17;UBERON:0002021!5.97e-09!10;UBERON:0000411!5.97e-09!10;UBERON:0001950!5.97e-09!10;UBERON:0003076!1.20e-07!12;UBERON:0003057!1.20e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!7.81e-35!73;UBERON:0005743!7.81e-35!73;UBERON:0000073!1.02e-34!75;UBERON:0001016!1.02e-34!75;UBERON:0000033!5.35e-31!63;UBERON:0004121!5.84e-31!102;UBERON:0000924!5.84e-31!102;UBERON:0006601!5.84e-31!102;UBERON:0002346!2.32e-30!71;UBERON:0003075!2.32e-30!71;UBERON:0007284!2.32e-30!71;UBERON:0001049!4.74e-29!52;UBERON:0005068!4.74e-29!52;UBERON:0006241!4.74e-29!52;UBERON:0007135!4.74e-29!52;UBERON:0000955!1.18e-27!50;UBERON:0006238!1.18e-27!50;UBERON:0002616!5.33e-27!49;UBERON:0003056!3.09e-25!49;UBERON:0003080!8.37e-22!40;UBERON:0002780!4.13e-21!39;UBERON:0001890!4.13e-21!39;UBERON:0006240!4.13e-21!39;UBERON:0002020!5.59e-20!34;UBERON:0002791!1.02e-16!29;UBERON:0003528!1.02e-16!29;UBERON:0001893!1.02e-16!29;UBERON:0007811!2.75e-16!86;UBERON:0000153!4.60e-16!94;UBERON:0000956!7.30e-12!21;UBERON:0001869!7.30e-12!21;UBERON:0000203!7.30e-12!21;UBERON:0002619!4.79e-11!17;UBERON:0002021!5.97e-09!10;UBERON:0000411!5.97e-09!10;UBERON:0001950!5.97e-09!10;UBERON:0003076!1.20e-07!12;UBERON:0003057!1.20e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.71e-42,73;UBERON:0001016,6.13e-40,75;UBERON:0002346,1.13e-39,64;UBERON:0003075,1.13e-39,64;UBERON:0007284,1.13e-39,64;UBERON:0000073,5.44e-38,54;UBERON:0004121,4.56e-37,95;UBERON:0000924,4.56e-37,95;UBERON:0006601,4.56e-37,95;UBERON:0001049,5.00e-36,52;UBERON:0005068,5.00e-36,52;UBERON:0006241,5.00e-36,52;UBERON:0007135,5.00e-36,52;UBERON:0010371,2.01e-34,73;UBERON:0000955,2.56e-31,47;UBERON:0006238,2.56e-31,47;UBERON:0003056,3.53e-31,49;UBERON:0002616,1.72e-30,46;UBERON:0003080,9.63e-28,40;UBERON:0002780,7.61e-27,39;UBERON:0001890,7.61e-27,39;UBERON:0006240,7.61e-27,39;UBERON:0002020,2.23e-25,34;UBERON:0010314,1.71e-22,92;UBERON:0003528,3.71e-21,29;UBERON:0002791,3.71e-21,29;UBERON:0001893,3.71e-21,29;UBERON:0000956,7.10e-15,21;UBERON:0001869,7.10e-15,21;UBERON:0000203,7.10e-15,21;UBERON:0002619,8.08e-14,17;UBERON:0002021,4.11e-11,10;UBERON:0000411,4.11e-11,10;UBERON:0001950,4.11e-11,10;UBERON:0003076,2.02e-08,12;UBERON:0003057,2.02e-08,12;UBERON:0002420,1.86e-07,8;UBERON:0007245,1.86e-07,8;UBERON:0010009,1.86e-07,8;UBERON:0010011,1.86e-07,8;UBERON:0000454,1.86e-07,8 | |||
|phase1_expression=9.76907967339243,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1406710097901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,2.41654801007919,2.52758868796568,3.49966054063406,5.75010257459886,0,0,0,0,0,0,10.9250888864183,17.4567023159771,13.9442908771359,0.677689064138264,0.889294796111139,0,0,0,1.19840044207362,0.384218305321555,1.24427534770173,2.16009501330705,1.47227472945967,31.1359573000146,31.5842013560807,3.30725157880376,3.54628242767475,6.43453150627015,52.8556228797066,62.9498576759975,56.6808107715538,17.672762555846,18.9379422256988,14.5855743755893,37.9688878641878,24.1987922313622,35.2963952364431,56.2740598254705,43.2809909629273,25.9095229697168,0.302904773332736,0.604572480854284,0,0,0,0,0,0,3.37066608316204,0,0,0,1.69012103732017,0,0,0,0,0,0,1.7127581957859,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.502666365318702,0,0,0,0.323533699894818,0,0,0,12.296793474485,8.79676168616511,0,0,0,0,43.2894947879938,120.780159144117,17.3403005915753,85.0000925740232,94.8704346695526,74.8036960414416,61.4894387026801,0,0.248813941220186,0,5.6819301089348,0.650602214813519,2.06911893990126,3.06105620669094,3.0140963567143,9.38903688288324,18.5764894413032,17.2411173189901,10.8655415710387,0,0.378212160335639,0.879755620819744,1.09597866213787,1.66828349535359,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.324275238183423,0,0,0.805238512562231,47.5255283754928,9.98174740079059,0,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.760902504450237,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.948339504765408,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,59.0826171155074,39.3831266949803,0,0,1.89304931649754,0.390438744296638,4.09304455692318,0,0,0.283076530788832,3.64329631507405,2.04579100537918,3.95287777946523,19.2792789853084,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,25.5329704315341,1.8006109403131,1.81102157295856,1.92903331528433,3.72414490648775,8.74007206250146,14.973960874793,26.1839856238555,0,0,0.441056796109924,0,0,0.0603129249281559,0,0.328281799490123,0.874442509889552,67.1239593278045,0,0,0,0.376736914009382,0,0.228778173206523,0,0,0,0,0.790839983952838,0,0.108005340821801,0.418176592028937,0,0.404593039154462,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.772758376128762,3.56596703357246,0,0,0,102.784835356306,95.2873239569856,97.3922372846974,68.225713390444,100.022047886514,111.798296813676,89.7779925308302,99.5209859125527,106.941608520272,119.60263201467,0,1.59609949360412,2.04880326904961,2.18796045361465,4.40187641518763,3.30918315210025,7.11189528965169,3.7086310303001,3.20919209591815,4.04315538822076,4.05566879824384,3.39527414494937,2.80924522409647,4.03358460150676,3.61843454420364,3.81034953026459,3.01299247456624,2.70072908649187,2.47251540481984,3.23837624295674,2.40008476669791,1.77475806159337,2.62279808942053,4.21504608233753,3.85848459702856,3.04612588410035,4.024415403201,3.94604567156764,3.93831930152999,3.36685362994643,2.49133538060766,2.56111654176465,3.6830793885272,3.25367366490529,2.3148793317737,5.74564329257276,4.44470056046276,5.37177635120746,1.53030665655075,1.98532277207564,2.55054619182464 | |phase1_expression=9.76907967339243,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1406710097901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,2.41654801007919,2.52758868796568,3.49966054063406,5.75010257459886,0,0,0,0,0,0,10.9250888864183,17.4567023159771,13.9442908771359,0.677689064138264,0.889294796111139,0,0,0,1.19840044207362,0.384218305321555,1.24427534770173,2.16009501330705,1.47227472945967,31.1359573000146,31.5842013560807,3.30725157880376,3.54628242767475,6.43453150627015,52.8556228797066,62.9498576759975,56.6808107715538,17.672762555846,18.9379422256988,14.5855743755893,37.9688878641878,24.1987922313622,35.2963952364431,56.2740598254705,43.2809909629273,25.9095229697168,0.302904773332736,0.604572480854284,0,0,0,0,0,0,3.37066608316204,0,0,0,1.69012103732017,0,0,0,0,0,0,1.7127581957859,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.502666365318702,0,0,0,0.323533699894818,0,0,0,12.296793474485,8.79676168616511,0,0,0,0,43.2894947879938,120.780159144117,17.3403005915753,85.0000925740232,94.8704346695526,74.8036960414416,61.4894387026801,0,0.248813941220186,0,5.6819301089348,0.650602214813519,2.06911893990126,3.06105620669094,3.0140963567143,9.38903688288324,18.5764894413032,17.2411173189901,10.8655415710387,0,0.378212160335639,0.879755620819744,1.09597866213787,1.66828349535359,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.324275238183423,0,0,0.805238512562231,47.5255283754928,9.98174740079059,0,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.760902504450237,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.948339504765408,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,59.0826171155074,39.3831266949803,0,0,1.89304931649754,0.390438744296638,4.09304455692318,0,0,0.283076530788832,3.64329631507405,2.04579100537918,3.95287777946523,19.2792789853084,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,25.5329704315341,1.8006109403131,1.81102157295856,1.92903331528433,3.72414490648775,8.74007206250146,14.973960874793,26.1839856238555,0,0,0.441056796109924,0,0,0.0603129249281559,0,0.328281799490123,0.874442509889552,67.1239593278045,0,0,0,0.376736914009382,0,0.228778173206523,0,0,0,0,0.790839983952838,0,0.108005340821801,0.418176592028937,0,0.404593039154462,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.772758376128762,3.56596703357246,0,0,0,102.784835356306,95.2873239569856,97.3922372846974,68.225713390444,100.022047886514,111.798296813676,89.7779925308302,99.5209859125527,106.941608520272,119.60263201467,0,1.59609949360412,2.04880326904961,2.18796045361465,4.40187641518763,3.30918315210025,7.11189528965169,3.7086310303001,3.20919209591815,4.04315538822076,4.05566879824384,3.39527414494937,2.80924522409647,4.03358460150676,3.61843454420364,3.81034953026459,3.01299247456624,2.70072908649187,2.47251540481984,3.23837624295674,2.40008476669791,1.77475806159337,2.62279808942053,4.21504608233753,3.85848459702856,3.04612588410035,4.024415403201,3.94604567156764,3.93831930152999,3.36685362994643,2.49133538060766,2.56111654176465,3.6830793885272,3.25367366490529,2.3148793317737,5.74564329257276,4.44470056046276,5.37177635120746,1.53030665655075,1.98532277207564,2.55054619182464 | ||
|short_description=p1@AI593442 | |short_description=p1@AI593442 | ||
}} | }} |
Latest revision as of 20:05, 26 September 2015
Short description: | p1@AI593442 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AI593442_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -301bp_to_ENSMUST00000098768, NM_178906, uc009plx.2_5end |
EntrezGene: | AI593442 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.46e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-15 | 23 |
neuron | 1.97e-14 | 33 |
neuronal stem cell | 1.97e-14 | 33 |
neuroblast | 1.97e-14 | 33 |
electrically signaling cell | 1.97e-14 | 33 |
ectodermal cell | 3.42e-14 | 44 |
neurectodermal cell | 3.42e-14 | 44 |
neural cell | 5.49e-14 | 43 |
electrically responsive cell | 1.11e-10 | 39 |
electrically active cell | 1.11e-10 | 39 |