FFCP PHASE1:Mm9::chr7:63274929..63274975,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233280 | |EntrezGene=233280 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BHK1 | |UniProt=Q8BHK1 | ||
|association_with_transcript=0bp_to_NM_153578,uc009hdu.1_5end | |association_with_transcript=0bp_to_NM_153578,uc009hdu.1_5end | ||
|cluster_id=chr7:63274929..63274975,- | |||
|description=CAGE_peak_1_at_Nipa1_5end | |description=CAGE_peak_1_at_Nipa1_5end | ||
|id=chr7:63274929..63274975,- | |id=chr7:63274929..63274975,- | ||
|ontology_enrichment_celltype=CL:0000221!9.58e-14!44;CL:0000133!9.58e-14!44;CL:0000055!1.09e-13!50;CL:0000393!1.50e-13!39;CL:0000211!1.50e-13!39;CL:0002319!1.77e-13!43;CL:0000540!1.15e-12!33;CL:0000047!1.15e-12!33;CL:0000031!1.15e-12!33;CL:0000404!1.15e-12!33;CL:0000117!2.99e-12!23;CL:0000337!2.99e-12!23 | |ontology_enrichment_celltype=CL:0000221!9.58e-14!44;CL:0000133!9.58e-14!44;CL:0000055!1.09e-13!50;CL:0000393!1.50e-13!39;CL:0000211!1.50e-13!39;CL:0002319!1.77e-13!43;CL:0000540!1.15e-12!33;CL:0000047!1.15e-12!33;CL:0000031!1.15e-12!33;CL:0000404!1.15e-12!33;CL:0000117!2.99e-12!23;CL:0000337!2.99e-12!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.23e-14,44;CL:0000133,8.23e-14,44;CL:0000393,1.29e-13,39;CL:0000211,1.29e-13,39;CL:0002319,1.53e-13,43;CL:0000540,1.00e-12,33;CL:0000047,1.00e-12,33;CL:0000031,1.00e-12,33;CL:0000404,1.00e-12,33;CL:0000117,2.62e-12,23;CL:0000337,2.62e-12,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.60e-26!73;UBERON:0005743!2.60e-26!73;UBERON:0000073!7.18e-26!75;UBERON:0001016!7.18e-26!75;UBERON:0001049!3.60e-21!52;UBERON:0005068!3.60e-21!52;UBERON:0006241!3.60e-21!52;UBERON:0007135!3.60e-21!52;UBERON:0004121!4.85e-21!102;UBERON:0000924!4.85e-21!102;UBERON:0006601!4.85e-21!102;UBERON:0000955!2.90e-20!50;UBERON:0006238!2.90e-20!50;UBERON:0002616!8.99e-20!49;UBERON:0002020!5.28e-19!34;UBERON:0002346!1.26e-18!71;UBERON:0003075!1.26e-18!71;UBERON:0007284!1.26e-18!71;UBERON:0000033!9.10e-18!63;UBERON:0002791!3.14e-16!29;UBERON:0003528!3.14e-16!29;UBERON:0001893!3.14e-16!29;UBERON:0003080!5.70e-15!40;UBERON:0000025!7.52e-15!114;UBERON:0004111!7.96e-15!122;UBERON:0002780!2.15e-14!39;UBERON:0001890!2.15e-14!39;UBERON:0006240!2.15e-14!39;UBERON:0003056!3.05e-13!49;UBERON:0000956!1.57e-11!21;UBERON:0001869!1.57e-11!21;UBERON:0000203!1.57e-11!21;UBERON:0002619!8.21e-10!17;UBERON:0002021!3.48e-07!10;UBERON:0000411!3.48e-07!10;UBERON:0001950!3.48e-07!10;UBERON:0003076!5.42e-07!12;UBERON:0003057!5.42e-07!12;UBERON:0000477!8.52e-07!154 | |ontology_enrichment_uberon=UBERON:0001017!2.60e-26!73;UBERON:0005743!2.60e-26!73;UBERON:0000073!7.18e-26!75;UBERON:0001016!7.18e-26!75;UBERON:0001049!3.60e-21!52;UBERON:0005068!3.60e-21!52;UBERON:0006241!3.60e-21!52;UBERON:0007135!3.60e-21!52;UBERON:0004121!4.85e-21!102;UBERON:0000924!4.85e-21!102;UBERON:0006601!4.85e-21!102;UBERON:0000955!2.90e-20!50;UBERON:0006238!2.90e-20!50;UBERON:0002616!8.99e-20!49;UBERON:0002020!5.28e-19!34;UBERON:0002346!1.26e-18!71;UBERON:0003075!1.26e-18!71;UBERON:0007284!1.26e-18!71;UBERON:0000033!9.10e-18!63;UBERON:0002791!3.14e-16!29;UBERON:0003528!3.14e-16!29;UBERON:0001893!3.14e-16!29;UBERON:0003080!5.70e-15!40;UBERON:0000025!7.52e-15!114;UBERON:0004111!7.96e-15!122;UBERON:0002780!2.15e-14!39;UBERON:0001890!2.15e-14!39;UBERON:0006240!2.15e-14!39;UBERON:0003056!3.05e-13!49;UBERON:0000956!1.57e-11!21;UBERON:0001869!1.57e-11!21;UBERON:0000203!1.57e-11!21;UBERON:0002619!8.21e-10!17;UBERON:0002021!3.48e-07!10;UBERON:0000411!3.48e-07!10;UBERON:0001950!3.48e-07!10;UBERON:0003076!5.42e-07!12;UBERON:0003057!5.42e-07!12;UBERON:0000477!8.52e-07!154 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-26,73;UBERON:0001016,5.30e-26,75;UBERON:0000073,8.49e-23,54;UBERON:0004121,1.14e-21,95;UBERON:0000924,1.14e-21,95;UBERON:0006601,1.14e-21,95;UBERON:0001049,2.82e-21,52;UBERON:0005068,2.82e-21,52;UBERON:0006241,2.82e-21,52;UBERON:0007135,2.82e-21,52;UBERON:0002346,1.07e-19,64;UBERON:0003075,1.07e-19,64;UBERON:0007284,1.07e-19,64;UBERON:0002020,4.25e-19,34;UBERON:0000955,3.36e-18,47;UBERON:0006238,3.36e-18,47;UBERON:0010371,7.36e-18,73;UBERON:0002616,1.02e-17,46;UBERON:0003528,2.62e-16,29;UBERON:0002791,2.62e-16,29;UBERON:0001893,2.62e-16,29;UBERON:0003080,4.82e-15,40;UBERON:0004111,1.05e-14,122;UBERON:0000025,1.22e-14,114;UBERON:0002780,1.83e-14,39;UBERON:0001890,1.83e-14,39;UBERON:0006240,1.83e-14,39;UBERON:0010314,2.03e-14,92;UBERON:0003056,2.64e-13,49;UBERON:0000956,1.39e-11,21;UBERON:0001869,1.39e-11,21;UBERON:0000203,1.39e-11,21;UBERON:0002619,7.41e-10,17;UBERON:0002021,3.25e-07,10;UBERON:0000411,3.25e-07,10;UBERON:0001950,3.25e-07,10;UBERON:0003076,5.06e-07,12;UBERON:0003057,5.06e-07,12 | |||
|phase1_expression=5.92550734287738,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.17515490338323,0.700837921786577,0.129123323441576,0,0,0,0,0,0,20.9859149943868,13.3633676477285,32.8794082720229,0.315462165358238,0.411343300817216,0.84877930359606,10.2051948181284,0.595745707205312,0.783599367416806,0.799962113967033,1.37645568640302,1.14846392823004,0.86152399231815,0.646413698057667,0.570070258369122,1.26015064879965,1.77384408524244,4.44521471421742,1.84519436275371,0,0.866554859253824,0.831173226792462,0.816677425049476,1.25559489221072,0,0.523523743973798,0,0,0,5.41356317294982,5.37297735463427,4.9557623083654,4.69434806608824,9.3750817243592,10.1055644057857,13.026803237977,6.99932108126813,1.43752564364972,0,0,0,5.14518872071894,4.58453503902011,6.18806510732931,13.7575193384526,6.34789175126439,7.60597684207415,5.42151251310611,10.6715375533337,5.39939830368839,3.9554654502679,7.8152812644071,7.19040265244171,4.99483796918021,9.7468235569969,11.0704869431986,10.0955981448663,19.4242669394586,18.7738259808871,7.83941114975706,9.00947427571422,5.51531271966013,42.9451935897616,48.1381264581158,43.4706489115169,13.1886287730194,14.2720724019759,14.5855743755893,44.9484628392223,30.3891809417107,37.5883689530953,16.7938293719991,17.6540884190888,13.7935589910722,2.65041676666144,4.08086424576642,3.76823835312181,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,0.896053774194671,3.93244376368905,5.11290967734173,4.1565760736459,4.59341446863442,6.4787973097273,7.69958864485907,7.64415719119937,7.11066703153331,1.5154372870785,2.28023878927589,0.505524445014783,1.94112595522402,0.776813650941515,4.75014845007439,5.72501578328248,1.82679286987285,3.22861696158482,4.06951129492081,2.70454026412121,3.14166478324189,3.70792451601561,3.47038456607788,8.84610551949874,5.17653919831709,7.28777010919299,6.78825354389311,3.72783522436244,10.2473278954042,11.9384622883669,1.78819938646014,0.958520996047362,1.19980546198682,0.254140454146129,20.8208988772704,22.4175295381127,16.8376831831238,21.5542157038423,27.3615539343454,18.0775598766817,23.3627418817571,2.95334155165917,4.97627882440372,2.0217820674694,3.57751155007006,2.34216797332867,3.44853156650209,2.34080768746954,3.76762044589288,2.99360596265843,3.07472928683639,4.40398105430725,6.20888089773638,2.15567992932842,3.21480336285293,2.28736461413134,3.06874025398605,4.17070873838397,2.43776516565517,4.52720700097476,1.19420560091096,2.1066395619397,0.51469581422943,0.284163499395593,1.44988040774851,1.87620847984877,1.2604344302271,1.65721314909647,0.983821158737019,1.85120535464854,2.09280550275367,1.87791380979733,1.16765342367169,3.78487654801005,2.29834449710733,3.24275238183423,3.65499968563331,1.97595103761946,3.75777972529041,24.814213930567,14.6124549578584,1.32167513193519,0.528901133327089,2.13288250535234,3.71578674976702,1.9330119198314,1.61346819698674,1.77902435075896,2.66315876557583,1.42358718463353,2.63518327558417,3.51869292320377,1.39269530428806,3.11942539390592,0.898819408654221,1.94524244887225,1.99141273254367,2.27601481143698,1.5994791765362,2.25415471346161,3.25842124552503,1.16371492300575,1.40271639780637,2.90888070771584,1.18088118383682,3.1399745568275,3.20832626196681,0.592905254174298,8.84279060295298,11.2038627214526,8.31989815823959,11.3601667977562,11.3353265083636,7.89340140522401,7.19240343627027,3.40483976227574,6.58947391651396,8.62609239164127,1.86070473834252,3.43241440426017,4.54641980304801,3.22915344339442,0,7.7596339869974,2.65287976478679,1.95557971730431,1.69745085775188,2.34690248288502,2.68010011906905,3.57065461329021,5.46374214001837,5.2019597555043,7.75126413770712,6.53764551495697,6.55453258862952,9.49767400262426,10.7040303350319,3.01582567878545,2.17562273527484,1.47529281905711,0.827810238914197,26.1697461680101,24.2628191245861,3.11476396215683,1.26235463602186,3.47059041357882,5.85658116444958,5.81643173878557,3.34556317133573,5.56996685205985,5.09537755419898,5.26253912177363,5.55286130031493,3.95287777946523,11.8888887076069,3.69044221541498,3.02711526234334,3.90928702448583,4.61916344323099,0,1.21390318077491,0.604647113929502,0.943025398779491,0.590603785761546,1.84461088766356,2.06742634534577,1.81766864738753,1.78248689192361,1.8962205476149,3.16255825724996,4.12542172992747,6.80879211507576,2.70091641046965,2.06973894052407,3.00071849044229,3.19212420556092,4.45922044005176,3.78462747384878,1.2178597964584,0.938686832254841,1.48282449604674,3.74898276693435,2.4732937941222,3.55221738730992,4.28221766989907,3.22305328808468,3.28281799490123,1.7488850197791,28.1846459055975,11.619219894254,2.68302928352189,4.44466865687308,12.9974235333237,15.1730592770338,14.870581258424,1.01987057996313,1.6794174278839,1.10559979043539,2.86401185404534,1.58167996790568,3.65975040828328,2.26811215725783,3.13632444021703,2.18362563746178,4.72025212346872,4.21532624199213,4.4498510137285,2.85152941241944,0,1.12738587736838,1.64468200648377,2.31641886639937,2.13896307178452,2.58319646955462,3.04121025883401,1.99507305697782,4.9477666240701,3.46035836604846,0.966336483304024,1.44015003128933,0,1.41907650703115,1.02710957164827,0.389762468933385,0.358053391334963,0.39736270956253,0.240390899039938,0.443068581523732,0.605798699688886,0.0762068066549998,0.302478555410522,0.682205165178267,0.192423683280659,0.233753804363138,3.85441652145859,1.99787358036658,0.0897138566094757,0.671538465456314,7.72758376128762,3.00291960721891,2.38097111547445,3.64426244434412,1.50471631210609,21.4605700194485,28.0798394269378,18.9055519435001,22.8564732517105,21.9226406326606,22.661816921691,21.6007200074178,16.6618845192962,19.4851235863208,19.1571315348173,1.66059756134683,4.78829848081237,4.95127456686989,3.40349403895612,1.88651846365184,2.20612210140017,3.55594764482584,3.91466608753899,3.20919209591815,4.80124702351215,5.57654459758527,3.77252682772152,4.775716880964,6.08238947846258,5.22662767496081,7.1444053692461,4.86714168968393,3.47236596834669,4.53294490883637,4.41596760403192,3.42869252385415,3.37204031702741,3.33810665926249,3.92435324907287,3.48204707536723,4.65380343404221,4.57319932181931,4.47218509444333,2.58027816307137,4.48913817326191,3.91495559809775,5.02372860115374,3.6830793885272,5.26785260032284,3.47231899766054,4.49659040288303,4.44470056046276,3.43793686477277,2.29545998482612,4.85301122062934,4.17362104116759 | |phase1_expression=5.92550734287738,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.17515490338323,0.700837921786577,0.129123323441576,0,0,0,0,0,0,20.9859149943868,13.3633676477285,32.8794082720229,0.315462165358238,0.411343300817216,0.84877930359606,10.2051948181284,0.595745707205312,0.783599367416806,0.799962113967033,1.37645568640302,1.14846392823004,0.86152399231815,0.646413698057667,0.570070258369122,1.26015064879965,1.77384408524244,4.44521471421742,1.84519436275371,0,0.866554859253824,0.831173226792462,0.816677425049476,1.25559489221072,0,0.523523743973798,0,0,0,5.41356317294982,5.37297735463427,4.9557623083654,4.69434806608824,9.3750817243592,10.1055644057857,13.026803237977,6.99932108126813,1.43752564364972,0,0,0,5.14518872071894,4.58453503902011,6.18806510732931,13.7575193384526,6.34789175126439,7.60597684207415,5.42151251310611,10.6715375533337,5.39939830368839,3.9554654502679,7.8152812644071,7.19040265244171,4.99483796918021,9.7468235569969,11.0704869431986,10.0955981448663,19.4242669394586,18.7738259808871,7.83941114975706,9.00947427571422,5.51531271966013,42.9451935897616,48.1381264581158,43.4706489115169,13.1886287730194,14.2720724019759,14.5855743755893,44.9484628392223,30.3891809417107,37.5883689530953,16.7938293719991,17.6540884190888,13.7935589910722,2.65041676666144,4.08086424576642,3.76823835312181,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,0.896053774194671,3.93244376368905,5.11290967734173,4.1565760736459,4.59341446863442,6.4787973097273,7.69958864485907,7.64415719119937,7.11066703153331,1.5154372870785,2.28023878927589,0.505524445014783,1.94112595522402,0.776813650941515,4.75014845007439,5.72501578328248,1.82679286987285,3.22861696158482,4.06951129492081,2.70454026412121,3.14166478324189,3.70792451601561,3.47038456607788,8.84610551949874,5.17653919831709,7.28777010919299,6.78825354389311,3.72783522436244,10.2473278954042,11.9384622883669,1.78819938646014,0.958520996047362,1.19980546198682,0.254140454146129,20.8208988772704,22.4175295381127,16.8376831831238,21.5542157038423,27.3615539343454,18.0775598766817,23.3627418817571,2.95334155165917,4.97627882440372,2.0217820674694,3.57751155007006,2.34216797332867,3.44853156650209,2.34080768746954,3.76762044589288,2.99360596265843,3.07472928683639,4.40398105430725,6.20888089773638,2.15567992932842,3.21480336285293,2.28736461413134,3.06874025398605,4.17070873838397,2.43776516565517,4.52720700097476,1.19420560091096,2.1066395619397,0.51469581422943,0.284163499395593,1.44988040774851,1.87620847984877,1.2604344302271,1.65721314909647,0.983821158737019,1.85120535464854,2.09280550275367,1.87791380979733,1.16765342367169,3.78487654801005,2.29834449710733,3.24275238183423,3.65499968563331,1.97595103761946,3.75777972529041,24.814213930567,14.6124549578584,1.32167513193519,0.528901133327089,2.13288250535234,3.71578674976702,1.9330119198314,1.61346819698674,1.77902435075896,2.66315876557583,1.42358718463353,2.63518327558417,3.51869292320377,1.39269530428806,3.11942539390592,0.898819408654221,1.94524244887225,1.99141273254367,2.27601481143698,1.5994791765362,2.25415471346161,3.25842124552503,1.16371492300575,1.40271639780637,2.90888070771584,1.18088118383682,3.1399745568275,3.20832626196681,0.592905254174298,8.84279060295298,11.2038627214526,8.31989815823959,11.3601667977562,11.3353265083636,7.89340140522401,7.19240343627027,3.40483976227574,6.58947391651396,8.62609239164127,1.86070473834252,3.43241440426017,4.54641980304801,3.22915344339442,0,7.7596339869974,2.65287976478679,1.95557971730431,1.69745085775188,2.34690248288502,2.68010011906905,3.57065461329021,5.46374214001837,5.2019597555043,7.75126413770712,6.53764551495697,6.55453258862952,9.49767400262426,10.7040303350319,3.01582567878545,2.17562273527484,1.47529281905711,0.827810238914197,26.1697461680101,24.2628191245861,3.11476396215683,1.26235463602186,3.47059041357882,5.85658116444958,5.81643173878557,3.34556317133573,5.56996685205985,5.09537755419898,5.26253912177363,5.55286130031493,3.95287777946523,11.8888887076069,3.69044221541498,3.02711526234334,3.90928702448583,4.61916344323099,0,1.21390318077491,0.604647113929502,0.943025398779491,0.590603785761546,1.84461088766356,2.06742634534577,1.81766864738753,1.78248689192361,1.8962205476149,3.16255825724996,4.12542172992747,6.80879211507576,2.70091641046965,2.06973894052407,3.00071849044229,3.19212420556092,4.45922044005176,3.78462747384878,1.2178597964584,0.938686832254841,1.48282449604674,3.74898276693435,2.4732937941222,3.55221738730992,4.28221766989907,3.22305328808468,3.28281799490123,1.7488850197791,28.1846459055975,11.619219894254,2.68302928352189,4.44466865687308,12.9974235333237,15.1730592770338,14.870581258424,1.01987057996313,1.6794174278839,1.10559979043539,2.86401185404534,1.58167996790568,3.65975040828328,2.26811215725783,3.13632444021703,2.18362563746178,4.72025212346872,4.21532624199213,4.4498510137285,2.85152941241944,0,1.12738587736838,1.64468200648377,2.31641886639937,2.13896307178452,2.58319646955462,3.04121025883401,1.99507305697782,4.9477666240701,3.46035836604846,0.966336483304024,1.44015003128933,0,1.41907650703115,1.02710957164827,0.389762468933385,0.358053391334963,0.39736270956253,0.240390899039938,0.443068581523732,0.605798699688886,0.0762068066549998,0.302478555410522,0.682205165178267,0.192423683280659,0.233753804363138,3.85441652145859,1.99787358036658,0.0897138566094757,0.671538465456314,7.72758376128762,3.00291960721891,2.38097111547445,3.64426244434412,1.50471631210609,21.4605700194485,28.0798394269378,18.9055519435001,22.8564732517105,21.9226406326606,22.661816921691,21.6007200074178,16.6618845192962,19.4851235863208,19.1571315348173,1.66059756134683,4.78829848081237,4.95127456686989,3.40349403895612,1.88651846365184,2.20612210140017,3.55594764482584,3.91466608753899,3.20919209591815,4.80124702351215,5.57654459758527,3.77252682772152,4.775716880964,6.08238947846258,5.22662767496081,7.1444053692461,4.86714168968393,3.47236596834669,4.53294490883637,4.41596760403192,3.42869252385415,3.37204031702741,3.33810665926249,3.92435324907287,3.48204707536723,4.65380343404221,4.57319932181931,4.47218509444333,2.58027816307137,4.48913817326191,3.91495559809775,5.02372860115374,3.6830793885272,5.26785260032284,3.47231899766054,4.49659040288303,4.44470056046276,3.43793686477277,2.29545998482612,4.85301122062934,4.17362104116759 | ||
|short_description=p1@Nipa1 | |short_description=p1@Nipa1 | ||
}} | }} |
Latest revision as of 23:44, 26 September 2015
Short description: | p1@Nipa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nipa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_153578, uc009hdu.1_5end |
EntrezGene: | Nipa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.23e-14 | 44 |
neurectodermal cell | 8.23e-14 | 44 |
electrically responsive cell | 1.29e-13 | 39 |
electrically active cell | 1.29e-13 | 39 |
neural cell | 1.53e-13 | 43 |
neuron | 1.00e-12 | 33 |
neuronal stem cell | 1.00e-12 | 33 |
neuroblast | 1.00e-12 | 33 |
electrically signaling cell | 1.00e-12 | 33 |
CNS neuron (sensu Vertebrata) | 2.62e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.62e-12 | 23 |