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FFCP PHASE1:Mm9::chr7:63274929..63274975,-: Difference between revisions

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(Created page with "{{FFCP |id=chr7:63274929..63274975,- |short_description=p1@Nipa1 |description=CAGE_peak_1_at_Nipa1_5end |association_with_transcript=0bp_to_NM_153578,uc009hdu.1_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chr7:63274929..63274975,-
|DHSsupport=NA
|short_description=p1@Nipa1
|DPIdataset=NA
|description=CAGE_peak_1_at_Nipa1_5end
|association_with_transcript=0bp_to_NM_153578,uc009hdu.1_5end
|EntrezGene=233280
|EntrezGene=233280
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BHK1
|UniProt=Q8BHK1
|association_with_transcript=0bp_to_NM_153578,uc009hdu.1_5end
|cluster_id=chr7:63274929..63274975,-
|description=CAGE_peak_1_at_Nipa1_5end
|id=chr7:63274929..63274975,-
|ontology_enrichment_celltype=CL:0000221!9.58e-14!44;CL:0000133!9.58e-14!44;CL:0000055!1.09e-13!50;CL:0000393!1.50e-13!39;CL:0000211!1.50e-13!39;CL:0002319!1.77e-13!43;CL:0000540!1.15e-12!33;CL:0000047!1.15e-12!33;CL:0000031!1.15e-12!33;CL:0000404!1.15e-12!33;CL:0000117!2.99e-12!23;CL:0000337!2.99e-12!23
|ontology_enrichment_celltype_v019_2=CL:0000221,8.23e-14,44;CL:0000133,8.23e-14,44;CL:0000393,1.29e-13,39;CL:0000211,1.29e-13,39;CL:0002319,1.53e-13,43;CL:0000540,1.00e-12,33;CL:0000047,1.00e-12,33;CL:0000031,1.00e-12,33;CL:0000404,1.00e-12,33;CL:0000117,2.62e-12,23;CL:0000337,2.62e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-26,73;UBERON:0001016,5.30e-26,75;UBERON:0000073,8.49e-23,54;UBERON:0004121,1.14e-21,95;UBERON:0000924,1.14e-21,95;UBERON:0006601,1.14e-21,95;UBERON:0001049,2.82e-21,52;UBERON:0005068,2.82e-21,52;UBERON:0006241,2.82e-21,52;UBERON:0007135,2.82e-21,52;UBERON:0002346,1.07e-19,64;UBERON:0003075,1.07e-19,64;UBERON:0007284,1.07e-19,64;UBERON:0002020,4.25e-19,34;UBERON:0000955,3.36e-18,47;UBERON:0006238,3.36e-18,47;UBERON:0010371,7.36e-18,73;UBERON:0002616,1.02e-17,46;UBERON:0003528,2.62e-16,29;UBERON:0002791,2.62e-16,29;UBERON:0001893,2.62e-16,29;UBERON:0003080,4.82e-15,40;UBERON:0004111,1.05e-14,122;UBERON:0000025,1.22e-14,114;UBERON:0002780,1.83e-14,39;UBERON:0001890,1.83e-14,39;UBERON:0006240,1.83e-14,39;UBERON:0010314,2.03e-14,92;UBERON:0003056,2.64e-13,49;UBERON:0000956,1.39e-11,21;UBERON:0001869,1.39e-11,21;UBERON:0000203,1.39e-11,21;UBERON:0002619,7.41e-10,17;UBERON:0002021,3.25e-07,10;UBERON:0000411,3.25e-07,10;UBERON:0001950,3.25e-07,10;UBERON:0003076,5.06e-07,12;UBERON:0003057,5.06e-07,12
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|phase1_expression=5.92550734287738,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,1.17515490338323,0.700837921786577,0.129123323441576,0,0,0,0,0,0,20.9859149943868,13.3633676477285,32.8794082720229,0.315462165358238,0.411343300817216,0.84877930359606,10.2051948181284,0.595745707205312,0.783599367416806,0.799962113967033,1.37645568640302,1.14846392823004,0.86152399231815,0.646413698057667,0.570070258369122,1.26015064879965,1.77384408524244,4.44521471421742,1.84519436275371,0,0.866554859253824,0.831173226792462,0.816677425049476,1.25559489221072,0,0.523523743973798,0,0,0,5.41356317294982,5.37297735463427,4.9557623083654,4.69434806608824,9.3750817243592,10.1055644057857,13.026803237977,6.99932108126813,1.43752564364972,0,0,0,5.14518872071894,4.58453503902011,6.18806510732931,13.7575193384526,6.34789175126439,7.60597684207415,5.42151251310611,10.6715375533337,5.39939830368839,3.9554654502679,7.8152812644071,7.19040265244171,4.99483796918021,9.7468235569969,11.0704869431986,10.0955981448663,19.4242669394586,18.7738259808871,7.83941114975706,9.00947427571422,5.51531271966013,42.9451935897616,48.1381264581158,43.4706489115169,13.1886287730194,14.2720724019759,14.5855743755893,44.9484628392223,30.3891809417107,37.5883689530953,16.7938293719991,17.6540884190888,13.7935589910722,2.65041676666144,4.08086424576642,3.76823835312181,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,0.896053774194671,3.93244376368905,5.11290967734173,4.1565760736459,4.59341446863442,6.4787973097273,7.69958864485907,7.64415719119937,7.11066703153331,1.5154372870785,2.28023878927589,0.505524445014783,1.94112595522402,0.776813650941515,4.75014845007439,5.72501578328248,1.82679286987285,3.22861696158482,4.06951129492081,2.70454026412121,3.14166478324189,3.70792451601561,3.47038456607788,8.84610551949874,5.17653919831709,7.28777010919299,6.78825354389311,3.72783522436244,10.2473278954042,11.9384622883669,1.78819938646014,0.958520996047362,1.19980546198682,0.254140454146129,20.8208988772704,22.4175295381127,16.8376831831238,21.5542157038423,27.3615539343454,18.0775598766817,23.3627418817571,2.95334155165917,4.97627882440372,2.0217820674694,3.57751155007006,2.34216797332867,3.44853156650209,2.34080768746954,3.76762044589288,2.99360596265843,3.07472928683639,4.40398105430725,6.20888089773638,2.15567992932842,3.21480336285293,2.28736461413134,3.06874025398605,4.17070873838397,2.43776516565517,4.52720700097476,1.19420560091096,2.1066395619397,0.51469581422943,0.284163499395593,1.44988040774851,1.87620847984877,1.2604344302271,1.65721314909647,0.983821158737019,1.85120535464854,2.09280550275367,1.87791380979733,1.16765342367169,3.78487654801005,2.29834449710733,3.24275238183423,3.65499968563331,1.97595103761946,3.75777972529041,24.814213930567,14.6124549578584,1.32167513193519,0.528901133327089,2.13288250535234,3.71578674976702,1.9330119198314,1.61346819698674,1.77902435075896,2.66315876557583,1.42358718463353,2.63518327558417,3.51869292320377,1.39269530428806,3.11942539390592,0.898819408654221,1.94524244887225,1.99141273254367,2.27601481143698,1.5994791765362,2.25415471346161,3.25842124552503,1.16371492300575,1.40271639780637,2.90888070771584,1.18088118383682,3.1399745568275,3.20832626196681,0.592905254174298,8.84279060295298,11.2038627214526,8.31989815823959,11.3601667977562,11.3353265083636,7.89340140522401,7.19240343627027,3.40483976227574,6.58947391651396,8.62609239164127,1.86070473834252,3.43241440426017,4.54641980304801,3.22915344339442,0,7.7596339869974,2.65287976478679,1.95557971730431,1.69745085775188,2.34690248288502,2.68010011906905,3.57065461329021,5.46374214001837,5.2019597555043,7.75126413770712,6.53764551495697,6.55453258862952,9.49767400262426,10.7040303350319,3.01582567878545,2.17562273527484,1.47529281905711,0.827810238914197,26.1697461680101,24.2628191245861,3.11476396215683,1.26235463602186,3.47059041357882,5.85658116444958,5.81643173878557,3.34556317133573,5.56996685205985,5.09537755419898,5.26253912177363,5.55286130031493,3.95287777946523,11.8888887076069,3.69044221541498,3.02711526234334,3.90928702448583,4.61916344323099,0,1.21390318077491,0.604647113929502,0.943025398779491,0.590603785761546,1.84461088766356,2.06742634534577,1.81766864738753,1.78248689192361,1.8962205476149,3.16255825724996,4.12542172992747,6.80879211507576,2.70091641046965,2.06973894052407,3.00071849044229,3.19212420556092,4.45922044005176,3.78462747384878,1.2178597964584,0.938686832254841,1.48282449604674,3.74898276693435,2.4732937941222,3.55221738730992,4.28221766989907,3.22305328808468,3.28281799490123,1.7488850197791,28.1846459055975,11.619219894254,2.68302928352189,4.44466865687308,12.9974235333237,15.1730592770338,14.870581258424,1.01987057996313,1.6794174278839,1.10559979043539,2.86401185404534,1.58167996790568,3.65975040828328,2.26811215725783,3.13632444021703,2.18362563746178,4.72025212346872,4.21532624199213,4.4498510137285,2.85152941241944,0,1.12738587736838,1.64468200648377,2.31641886639937,2.13896307178452,2.58319646955462,3.04121025883401,1.99507305697782,4.9477666240701,3.46035836604846,0.966336483304024,1.44015003128933,0,1.41907650703115,1.02710957164827,0.389762468933385,0.358053391334963,0.39736270956253,0.240390899039938,0.443068581523732,0.605798699688886,0.0762068066549998,0.302478555410522,0.682205165178267,0.192423683280659,0.233753804363138,3.85441652145859,1.99787358036658,0.0897138566094757,0.671538465456314,7.72758376128762,3.00291960721891,2.38097111547445,3.64426244434412,1.50471631210609,21.4605700194485,28.0798394269378,18.9055519435001,22.8564732517105,21.9226406326606,22.661816921691,21.6007200074178,16.6618845192962,19.4851235863208,19.1571315348173,1.66059756134683,4.78829848081237,4.95127456686989,3.40349403895612,1.88651846365184,2.20612210140017,3.55594764482584,3.91466608753899,3.20919209591815,4.80124702351215,5.57654459758527,3.77252682772152,4.775716880964,6.08238947846258,5.22662767496081,7.1444053692461,4.86714168968393,3.47236596834669,4.53294490883637,4.41596760403192,3.42869252385415,3.37204031702741,3.33810665926249,3.92435324907287,3.48204707536723,4.65380343404221,4.57319932181931,4.47218509444333,2.58027816307137,4.48913817326191,3.91495559809775,5.02372860115374,3.6830793885272,5.26785260032284,3.47231899766054,4.49659040288303,4.44470056046276,3.43793686477277,2.29545998482612,4.85301122062934,4.17362104116759
|short_description=p1@Nipa1
}}
}}

Latest revision as of 23:44, 26 September 2015

Short description:p1@Nipa1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nipa1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_153578, uc009hdu.1_5end
EntrezGene:Nipa1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nipa1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.38
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F348.14
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E444.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.79
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F94.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F116.84
cortex, adult.CNhs10473.12-14D521.55
cortex, neonate N30.CNhs11107.1392-42F227.36
diencephalon, adult.CNhs10482.20-12F218.08
diencephalon, neonate N30.CNhs11201.1388-42B223.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E824.81
hippocampus, neonate N00.CNhs11228.627-43G114.61
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F88.84
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D711.36
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C79.50
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C226.17
medulla oblongata, neonate N30.CNhs11200.1396-42A324.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.28
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C928.18
spleen, adult.CNhs10465.25-2G211.62
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D113.00
spleen, neonate N20.CNhs11112.824-19H115.17
spleen, neonate N25.CNhs11099.1354-25G314.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B84.72
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I44.95
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A121.46
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell8.23e-1444
neurectodermal cell8.23e-1444
electrically responsive cell1.29e-1339
electrically active cell1.29e-1339
neural cell1.53e-1343
neuron1.00e-1233
neuronal stem cell1.00e-1233
neuroblast1.00e-1233
electrically signaling cell1.00e-1233
CNS neuron (sensu Vertebrata)2.62e-1223
neuroblast (sensu Vertebrata)2.62e-1223

Uber anatomy
Ontology termp-valuen
central nervous system1.91e-2673
nervous system5.30e-2675
regional part of nervous system8.49e-2354
ectoderm-derived structure1.14e-2195
ectoderm1.14e-2195
presumptive ectoderm1.14e-2195
neural tube2.82e-2152
neural rod2.82e-2152
future spinal cord2.82e-2152
neural keel2.82e-2152
neurectoderm1.07e-1964
neural plate1.07e-1964
presumptive neural plate1.07e-1964
gray matter4.25e-1934
brain3.36e-1847
future brain3.36e-1847
ecto-epithelium7.36e-1873
regional part of brain1.02e-1746
brain grey matter2.62e-1629
regional part of telencephalon2.62e-1629
telencephalon2.62e-1629
anterior neural tube4.82e-1540
anatomical conduit1.05e-14122
tube1.22e-14114
regional part of forebrain1.83e-1439
forebrain1.83e-1439
future forebrain1.83e-1439
structure with developmental contribution from neural crest2.03e-1492
pre-chordal neural plate2.64e-1349
cerebral cortex1.39e-1121
cerebral hemisphere1.39e-1121
pallium1.39e-1121
regional part of cerebral cortex7.41e-1017
occipital lobe3.25e-0710
visual cortex3.25e-0710
neocortex3.25e-0710
posterior neural tube5.06e-0712
chordal neural plate5.06e-0712
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