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FFCP PHASE1:Mm9::chr6:29346576..29346658,+: Difference between revisions

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(Created page with "{{FFCP |id=chr6:29346576..29346658,+ |short_description=p1@Ccdc136 |description=CAGE_peak_1_at_Ccdc136_5end |association_with_transcript=0bp_to_ENSMUST00000031781,ENSMUST0...")
 
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{{FFCP
{{FFCP
|id=chr6:29346576..29346658,+
|DHSsupport=NA
|short_description=p1@Ccdc136
|DPIdataset=NA
|description=CAGE_peak_1_at_Ccdc136_5end
|association_with_transcript=0bp_to_ENSMUST00000031781,ENSMUST00000096084,ENSMUST00000115275,ENSMUST00000166874,ENSMUST00000175215_5end
|EntrezGene=232664
|EntrezGene=232664
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3TVA9,E9QP94,D3Z165
|UniProt=Q3TVA9,E9QP94,D3Z165
|association_with_transcript=0bp_to_ENSMUST00000031781,ENSMUST00000096084,ENSMUST00000115275,ENSMUST00000166874,ENSMUST00000175215_5end
|cluster_id=chr6:29346576..29346658,+
|description=CAGE_peak_1_at_Ccdc136_5end
|id=chr6:29346576..29346658,+
|ontology_enrichment_celltype=CL:0000221!7.15e-14!44;CL:0000133!7.15e-14!44;CL:0002319!1.16e-13!43;CL:0000540!5.73e-13!33;CL:0000047!5.73e-13!33;CL:0000031!5.73e-13!33;CL:0000404!5.73e-13!33;CL:0000117!2.87e-12!23;CL:0000337!2.87e-12!23;CL:0000055!2.01e-11!50;CL:0000393!4.90e-11!39;CL:0000211!4.90e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,5.37e-14,44;CL:0000133,5.37e-14,44;CL:0002319,8.77e-14,43;CL:0000540,4.39e-13,33;CL:0000047,4.39e-13,33;CL:0000031,4.39e-13,33;CL:0000404,4.39e-13,33;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0000393,3.93e-11,39;CL:0000211,3.93e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.29e-32,73;UBERON:0004121,2.17e-32,95;UBERON:0000924,2.17e-32,95;UBERON:0006601,2.17e-32,95;UBERON:0001016,4.30e-31,75;UBERON:0002346,5.67e-30,64;UBERON:0003075,5.67e-30,64;UBERON:0007284,5.67e-30,64;UBERON:0010371,3.57e-28,73;UBERON:0000073,1.20e-27,54;UBERON:0001049,5.49e-26,52;UBERON:0005068,5.49e-26,52;UBERON:0006241,5.49e-26,52;UBERON:0007135,5.49e-26,52;UBERON:0010314,6.05e-26,92;UBERON:0003056,1.18e-23,49;UBERON:0000955,1.60e-22,47;UBERON:0006238,1.60e-22,47;UBERON:0002616,2.91e-22,46;UBERON:0003080,1.47e-19,40;UBERON:0002780,6.27e-19,39;UBERON:0001890,6.27e-19,39;UBERON:0006240,6.27e-19,39;UBERON:0002020,1.08e-17,34;UBERON:0003528,6.69e-15,29;UBERON:0002791,6.69e-15,29;UBERON:0001893,6.69e-15,29;UBERON:0000956,2.53e-11,21;UBERON:0001869,2.53e-11,21;UBERON:0000203,2.53e-11,21;UBERON:0002619,2.32e-09,17;UBERON:0002021,3.73e-07,10;UBERON:0000411,3.73e-07,10;UBERON:0001950,3.73e-07,10;UBERON:0003076,5.86e-07,12;UBERON:0003057,5.86e-07,12;UBERON:0000025,6.45e-07,114;UBERON:0004111,6.80e-07,122
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4.0761856588386,13.3700685715104,13.2908395029021,4.01257683228291,80.7595134942405,66.2868340570335,67.6016705858488,92.2851589185602,98.6518828469725,92.9134493789332,76.9525650264259,90.9648830512925,79.75306398122,94.750137050583,22.8332164685189,19.9512436700516,20.6587662962502,11.6691224192781,17.1882793354945,14.7074806760011,20.4466989577486,20.1914356094116,18.2923949467335,18.4468964587572,16.7296337927558,15.8446126764304,18.2600939566271,20.6160990743679,19.1834466311748,22.3858034903045,20.2797570403497,21.0271050305439,21.4284668417719,17.2222736557245,28.1152786956041,22.8943789945545,21.6976932852062,13.8079095800712,20.2335167892961,20.8151935413524,22.1342847176055,26.83311056666,20.642225304571,17.3954104213899,22.1847483892206,21.2769681931217,13.0953933814301,20.9164735601054,14.6609024345667,25.4806789496705,15.439486157397,15.4707158914775,16.0682198937828,10.5883881177367,6.72416723299222
|phase1_expression=22.4208385946712,0,0.909998478779072,0,0,1.51091344720701,0.467225281191051,0.516493293766305,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,25.3429004650188,0.297872853602656,0,0.159992422793407,0.68822784320151,0.57423196411502,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,12.3378881616066,8.71841608487825,16.5192076945513,12.5182615095686,30.0874715805016,38.664768161267,43.941157190788,39.0562116334761,31.6255641602937,0,0,0.336093799142464,7.71778308107841,7.73640287834643,3.09403255366465,32.168317276676,37.0293685490423,40.5652098243955,26.7687180334614,22.2323699027785,0.899899717281399,0,0.7104801149461,18.2756067416227,18.8266969607562,53.192771114249,47.2520784160917,47.323116304061,79.4109736642574,67.3649049902421,20.5784542681123,24.8239769937232,25.7381260250806,117.823992669346,249.501058618457,195.387510301942,32.8396856448183,34.7653045689157,39.5894161623138,103.297709630511,104.111082855861,103.138817249347,67.7645746589436,75.7417341851228,56.6654315308914,2.12033341332915,3.6274348851257,6.37701875143691,0.860423876981386,0,0.539703191637817,0,0,5.47733238513832,6.98764322570037,12.7295142255406,11.3068663843309,22.1124169049388,10.2661181931454,30.5766287647975,78.2173373468664,16.4533191168523,14.4415123320806,11.62706223534,3.65388415100992,0.258937883647172,4.45326417194474,13.1848848342263,7.30717147949139,8.30215790121811,5.87818298155228,9.8774513993992,2.76466500925286,1.23597483867187,2.74738778147832,2.65383165584962,10.1913115466868,3.75430581382669,1.93950101254089,0,64.1189945455288,103.885566579474,0.766371165625774,0,0,0,88.0768959700357,60.3900795720587,15.5811396619952,78.568592726909,105.099052962766,162.490250845576,127.683874034325,17.6182099461047,4.22983700074316,0.758168275301024,19.3606507415556,25.2433659347645,22.5304062344803,29.1700650284666,60.4326319521217,115.117756564047,78.7899379751826,98.480512512275,53.8103011137153,20.47895932862,24.5837904218165,24.105304010461,17.535658594206,18.0730711996639,15.3230953269753,17.9030458674911,27.0686602873151,0,0,0,20.9197030260857,24.6252362980151,25.5688127274641,25.8051761787879,29.3178705303632,24.3742038362058,26.7414036462969,19.047411499373,21.4848229955592,12.671108443338,7.55170334763838,4.53985333456792,2.77779976108131,3.95190207523891,3.35516046900929,52.5724871410318,43.1170325869202,0.330418782983798,2.3800550999719,20.6889603019177,20.4368271237186,9.14958975386863,9.07575860805041,5.78182913996663,3.23383564391351,1.42358718463353,4.11747386810027,5.7807098024062,6.16765063327568,5.45899443933536,0,1.29682829924817,1.99141273254367,13.4664209676688,17.4800224292885,9.01661885384643,17.1067115390064,16.8738663835834,17.1131400532377,10.0546094027569,4.13308414342886,5.18095801876537,2.96153193412321,0.296452627087149,2.16898637430922,2.55526693647164,0.674586337154561,0.202860121388503,0.241177159752417,0.763877555344259,1.15078454980324,0.162135226775035,0,0,0.744281895337007,0.936113019343682,0.252578877947112,0.179397413521912,0,2.21703828199926,16.1067700004912,9.77789858652155,13.0703716046895,10.0916806764056,8.20780661464897,6.18913466303636,5.07347484430277,3.94087860265477,5.53661724121937,3.82691444777969,3.60499292374624,4.48980952851328,2.74833211304872,0,0,1.47529281905711,2.75936746304733,93.2798927829071,102.911860827954,21.6394127897212,4.54447668967871,14.8288863125641,13.2749173060857,18.5264122050207,13.3822526853429,25.6218475194753,24.6276581786284,20.6453457854196,27.179794785752,26.4842811224171,24.4204200480573,12.2068473279111,32.4079398674405,26.2248004559257,26.3952196756057,1.32745138339963,13.352934988524,8.16273603804828,5.46954731292105,4.42952839321159,5.53383266299069,5.16856586336442,5.08947221268508,4.27796854061666,3.79244109522979,4.21674434299995,3.09406629744561,15.3197822589205,28.6297139509783,31.6928775267749,34.722599675118,30.1478397191865,29.7875925395458,35.7071374706602,27.7063103694285,11.0295702789944,3.60114520468494,6.3953235435939,18.3023740765043,16.3079070962865,12.6657142349127,13.0115854963419,13.459553779095,2.04036585640896,96.2357317434545,0.170870880797853,12.5895989457566,4.44466865687308,0.376736914009382,0.410082683163076,0,1.01987057996313,0.839708713941948,0.276399947608848,2.86401185404534,21.5108475635172,15.2489600345137,14.3647103292996,17.5634168652154,19.2159056096636,15.779128527024,16.8613049679685,8.89970202745701,4.79575401179634,1.24267862617385,0,18.5400517094534,11.7475528224539,13.6115831840833,10.5911055251739,12.3337971608268,15.256441023948,7.81226309063701,5.7672639434141,1.20792060413003,2.01621004380506,1.26404448251271,10.7444364103787,11.1954943309662,6.23619950293416,4.11761400035207,3.77494574084403,1.08175904567972,1.62458479892035,1.31256384932592,1.82896335972,0.907435666231565,0.682205165178267,0.481059208201647,0.701261413089414,9.29594572822367,26.8603003582618,20.9033285900078,21.321346278238,18.7393906211225,14.0761856588386,13.3700685715104,13.2908395029021,4.01257683228291,80.7595134942405,66.2868340570335,67.6016705858488,92.2851589185602,98.6518828469725,92.9134493789332,76.9525650264259,90.9648830512925,79.75306398122,94.750137050583,22.8332164685189,19.9512436700516,20.6587662962502,11.6691224192781,17.1882793354945,14.7074806760011,20.4466989577486,20.1914356094116,18.2923949467335,18.4468964587572,16.7296337927558,15.8446126764304,18.2600939566271,20.6160990743679,19.1834466311748,22.3858034903045,20.2797570403497,21.0271050305439,21.4284668417719,17.2222736557245,28.1152786956041,22.8943789945545,21.6976932852062,13.8079095800712,20.2335167892961,20.8151935413524,22.1342847176055,26.83311056666,20.642225304571,17.3954104213899,22.1847483892206,21.2769681931217,13.0953933814301,20.9164735601054,14.6609024345667,25.4806789496705,15.439486157397,15.4707158914775,16.0682198937828,10.5883881177367,6.72416723299222
|short_description=p1@Ccdc136
}}
}}

Latest revision as of 00:51, 27 September 2015

Short description:p1@Ccdc136
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc136_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000031781, ENSMUST00000096084, ENSMUST00000115275, ENSMUST00000166874, ENSMUST00000175215_5end
EntrezGene:Ccdc136
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ccdc136

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B838.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C439.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C332.17
Mouse Granule cells, donor2.CNhs12357.11731-123E337.03
Mouse Granule cells, donor3.CNhs12108.11636-122C740.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.77
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C818.28
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D553.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F547.25
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.32
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F179.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D567.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.58
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3117.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3249.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7195.39
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D432.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4103.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5104.11
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6103.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D667.76
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F675.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E156.67
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F93.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C513.18
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F510.19
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B264.12
cerebellum, neonate N30.CNhs11135.1395-42I2103.89
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A488.08
corpus striatum, adult.CNhs10487.19-21D860.39
corpus striatum, neonate N00.CNhs11226.630-43F115.58
cortex, adult.CNhs10473.12-14D578.57
cortex, neonate N30.CNhs11107.1392-42F2105.10
diencephalon, adult.CNhs10482.20-12F2162.49
diencephalon, neonate N30.CNhs11201.1388-42B2127.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G419.36
eyeball, embryo E12.CNhs11016.345-16C625.24
eyeball, embryo E14.CNhs10521.399-16E222.53
eyeball, embryo E15.CNhs10593.426-16C929.17
eyeball, embryo E17.CNhs11023.1261-18D460.43
eyeball, neonate N00.CNhs11207.633-15C6115.12
eyeball, neonate N01.CNhs11140.1532-43E778.79
eyeball, neonate N02.CNhs11205.1551-44G898.48
eyeball, neonate N16.CNhs11188.777-19A253.81
forelimb, embryo E11.CNhs10596.335-25E220.48
forelimb, embryo E12.CNhs10600.359-14H224.58
forelimb, embryo E13.CNhs10589.384-1E224.11
forelimb, embryo E14.CNhs10577.413-26A817.54
forelimb, embryo E15.CNhs11007.437-20E718.07
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I627.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E920.92
heart, embryo E12.CNhs11015.353-12F524.63
heart, embryo E13.CNhs11013.376-3I925.57
heart, embryo E14.CNhs10597.403-26D425.81
heart, embryo E15.CNhs11017.431-16C829.32
heart, embryo E16.CNhs11021.457-17C624.37
heart, embryo E17.CNhs11025.479-18E526.74
heart, embryo E18.CNhs11030.1283-20G319.05
heart, neonate N00.CNhs11213.639-21E321.48
heart, neonate N03.CNhs11221.1349-25I212.67
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E852.57
hippocampus, neonate N00.CNhs11228.627-43G143.12
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I520.69
intestine, embryo E13.CNhs11010.381-16D520.44
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I913.47
kidney, embryo E15.CNhs10997.434-16F817.48
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G717.11
kidney, neonate N10.CNhs11206.758-6D510.05
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F35.18
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G216.11
lung, embryo E14.CNhs10604.404-26F89.78
lung, embryo E15.CNhs11020.432-17C513.07
lung, embryo E16.CNhs10998.458-17B610.09
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C293.28
medulla oblongata, neonate N30.CNhs11200.1396-42A3102.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I712.21
ovary, embryo E18.CNhs11040.505-44H732.41
ovary, neonate N00.CNhs11217.1299-22I426.22
oviduct, adult pregnant day01.CNhs10500.988-6G626.40
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E628.63
pituitary gland, embryo E13.CNhs11009.370-44C731.69
pituitary gland, embryo E14.CNhs11037.398-44A534.72
pituitary gland, embryo E15.CNhs10592.427-16B930.15
pituitary gland, embryo E16.CNhs11036.449-43F629.79
pituitary gland, embryo E17.CNhs11039.1265-44F535.71
pituitary gland, neonate N00.CNhs11190.1308-22E927.71
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C318.30
skin, neonate N00.CNhs11124.650-25G416.31
skin, neonate N03.CNhs11215.662-22H312.67
skin, neonate N06.CNhs11097.693-20I513.01
skin, neonate N10.CNhs11108.762-6C413.46
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C996.24
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E321.51
stomach, embryo E15.CNhs10603.1252-16G815.25
stomach, embryo E16.CNhs11022.459-17D414.36
stomach, embryo E17.CNhs11006.1035-18D517.56
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B815.78
stomach, neonate N07.CNhs11210.718-18A916.86
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F518.54
testis, embryo E15.CNhs11034.443-27C511.75
testis, embryo E16.CNhs11033.470-26G513.61
testis, embryo E17.CNhs11029.486-18I510.59
testis, embryo E18.CNhs11027.503-18G512.33
testis, neonate N00.CNhs11189.1300-22B715.26
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I410.74
thymus, embryo E15.CNhs11005.430-45I211.20
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.32
urinary bladder, adult.CNhs10481.879-12E418.74
uterus, adult pregnant day19.CNhs10497.590-15F514.08
uterus, adult.CNhs10509.92-27E513.37
vagina, adult.CNhs10502.89-27D513.29
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A180.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A266.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D792.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A498.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A592.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A676.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A790.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A879.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A994.75
whole body, embryo E11.CNhs11014.324-5I822.83
whole body, embryo E12.CNhs10587.857-27C919.95
whole body, embryo E13.CNhs10512.372-23H220.66
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B117.19
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.28
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.92
whole body, embryo E17.5.CNhs10513.490-9F914.66
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C616.07
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell5.37e-1444
neurectodermal cell5.37e-1444
neural cell8.77e-1443
neuron4.39e-1333
neuronal stem cell4.39e-1333
neuroblast4.39e-1333
electrically signaling cell4.39e-1333
CNS neuron (sensu Vertebrata)2.24e-1223
neuroblast (sensu Vertebrata)2.24e-1223
electrically responsive cell3.93e-1139
electrically active cell3.93e-1139

Uber anatomy
Ontology termp-valuen
central nervous system1.29e-3273
ectoderm-derived structure2.17e-3295
ectoderm2.17e-3295
presumptive ectoderm2.17e-3295
nervous system4.30e-3175
neurectoderm5.67e-3064
neural plate5.67e-3064
presumptive neural plate5.67e-3064
ecto-epithelium3.57e-2873
regional part of nervous system1.20e-2754
neural tube5.49e-2652
neural rod5.49e-2652
future spinal cord5.49e-2652
neural keel5.49e-2652
structure with developmental contribution from neural crest6.05e-2692
pre-chordal neural plate1.18e-2349
brain1.60e-2247
future brain1.60e-2247
regional part of brain2.91e-2246
anterior neural tube1.47e-1940
regional part of forebrain6.27e-1939
forebrain6.27e-1939
future forebrain6.27e-1939
gray matter1.08e-1734
brain grey matter6.69e-1529
regional part of telencephalon6.69e-1529
telencephalon6.69e-1529
cerebral cortex2.53e-1121
cerebral hemisphere2.53e-1121
pallium2.53e-1121
regional part of cerebral cortex2.32e-0917
occipital lobe3.73e-0710
visual cortex3.73e-0710
neocortex3.73e-0710
posterior neural tube5.86e-0712
chordal neural plate5.86e-0712
tube6.45e-07114
anatomical conduit6.80e-07122
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