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FFCP PHASE1:Mm9::chr17:91492163..91492198,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:91492163..91492198,-
|DHSsupport=NA
|short_description=p3@Nrxn1
|DPIdataset=NA
|description=CAGE_peak_3_at_Nrxn1_5end
|association_with_transcript=-20bp_to_ENSMUST00000159778,ENSMUST00000161102_5end
|EntrezGene=18189
|EntrezGene=18189
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=E0CZA5
|UniProt=E0CZA5
|association_with_transcript=-20bp_to_ENSMUST00000159778,ENSMUST00000161102_5end
|cluster_id=chr17:91492163..91492198,-
|description=CAGE_peak_3_at_Nrxn1_5end
|id=chr17:91492163..91492198,-
|ontology_enrichment_celltype=CL:0000117!1.37e-12!23;CL:0000337!1.37e-12!23;CL:0000540!8.20e-12!33;CL:0000047!8.20e-12!33;CL:0000031!8.20e-12!33;CL:0000404!8.20e-12!33;CL:0000221!3.14e-11!44;CL:0000133!3.14e-11!44;CL:0002319!3.35e-11!43;CL:0000055!5.31e-08!50;CL:0000393!7.35e-08!39;CL:0000211!7.35e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.63e-16,23;CL:0000337,3.63e-16,23;CL:0000540,5.44e-12,33;CL:0000047,5.44e-12,33;CL:0000031,5.44e-12,33;CL:0000404,5.44e-12,33;CL:0002319,1.93e-10,43;CL:0000221,5.59e-10,44;CL:0000133,5.59e-10,44;CL:0000393,8.74e-09,39;CL:0000211,8.74e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.38e-32!71;UBERON:0003075!1.38e-32!71;UBERON:0007284!1.38e-32!71;UBERON:0001017!1.99e-31!73;UBERON:0005743!1.99e-31!73;UBERON:0000073!2.39e-31!75;UBERON:0001016!2.39e-31!75;UBERON:0004121!3.07e-29!102;UBERON:0000924!3.07e-29!102;UBERON:0006601!3.07e-29!102;UBERON:0001049!1.04e-27!52;UBERON:0005068!1.04e-27!52;UBERON:0006241!1.04e-27!52;UBERON:0007135!1.04e-27!52;UBERON:0000033!1.88e-26!63;UBERON:0000955!2.10e-26!50;UBERON:0006238!2.10e-26!50;UBERON:0002616!9.00e-26!49;UBERON:0003056!3.48e-23!49;UBERON:0003080!2.95e-21!40;UBERON:0002780!1.78e-20!39;UBERON:0001890!1.78e-20!39;UBERON:0006240!1.78e-20!39;UBERON:0002020!8.69e-19!34;UBERON:0002791!1.46e-15!29;UBERON:0003528!1.46e-15!29;UBERON:0001893!1.46e-15!29;UBERON:0007811!1.23e-13!86;UBERON:0000153!8.09e-12!94;UBERON:0000956!6.95e-11!21;UBERON:0001869!6.95e-11!21;UBERON:0000203!6.95e-11!21;UBERON:0002619!1.14e-09!17;UBERON:0002021!5.80e-08!10;UBERON:0000411!5.80e-08!10;UBERON:0001950!5.80e-08!10;UBERON:0003076!6.27e-07!12;UBERON:0003057!6.27e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-37,54;UBERON:0002346,3.91e-36,64;UBERON:0003075,3.91e-36,64;UBERON:0007284,3.91e-36,64;UBERON:0001017,4.99e-36,73;UBERON:0001049,1.77e-35,52;UBERON:0005068,1.77e-35,52;UBERON:0006241,1.77e-35,52;UBERON:0007135,1.77e-35,52;UBERON:0001016,2.01e-34,75;UBERON:0000955,8.96e-31,47;UBERON:0006238,8.96e-31,47;UBERON:0002616,5.92e-30,46;UBERON:0004121,3.23e-29,95;UBERON:0000924,3.23e-29,95;UBERON:0006601,3.23e-29,95;UBERON:0010371,6.61e-29,73;UBERON:0003056,2.08e-27,49;UBERON:0003080,1.45e-26,40;UBERON:0002780,1.54e-25,39;UBERON:0001890,1.54e-25,39;UBERON:0006240,1.54e-25,39;UBERON:0002020,2.18e-24,34;UBERON:0010314,6.53e-24,92;UBERON:0003528,4.16e-20,29;UBERON:0002791,4.16e-20,29;UBERON:0001893,4.16e-20,29;UBERON:0000956,6.58e-14,21;UBERON:0001869,6.58e-14,21;UBERON:0000203,6.58e-14,21;UBERON:0002619,2.68e-12,17;UBERON:0002021,4.82e-10,10;UBERON:0000411,4.82e-10,10;UBERON:0001950,4.82e-10,10;UBERON:0003076,5.01e-09,12;UBERON:0003057,5.01e-09,12;UBERON:0002420,2.03e-07,8;UBERON:0007245,2.03e-07,8;UBERON:0010009,2.03e-07,8;UBERON:0010011,2.03e-07,8;UBERON:0000454,2.03e-07,8;UBERON:0000025,2.41e-07,114
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.31811709640683,1.36100929351998,0.55994568650145,0,0,0,0,0,0,0,11.7343547298567,12.6957835025288,22.8179305262225,0,0,0,0,0,1.49800055259202,1.53687322128622,1.76272340924412,3.10513658162888,1.47227472945967,20.5668708770739,19.6573001446936,2.69479758272899,2.01275489138296,2.75765635983006,17.6185409599022,36.3908913542785,32.1037654505549,10.9465618816061,12.9912453915422,14.5855743755893,24.0097379141188,27.0126052815206,22.1557459276375,27.4004584490511,35.0234334765793,12.1159639786445,0.227178579999552,0.906858721281426,0,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.68510327831436,1.03575153458869,6.38301197978747,1.38788261412909,2.13125834818499,0.922461989024234,2.26083960828934,4.58595957829249,1.0053327306374,0,0,0,0,0,0,0,83.1497463512794,66.6040527666787,0,0,0,0,34.1522657842996,28.3650373747548,7.03664371832041,31.8098505951866,17.6443665557928,36.5706958424826,26.2830846169767,0,0,0,1.89397670297827,0.650602214813519,0.459804208866946,4.32149111532838,2.10986744970001,1.83698547708585,1.92170580427275,2.06143794031403,5.69147415625834,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.268412837520744,24.6039239820029,8.02655976558419,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,1.11189021922435,0.190225626112559,0,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0.889357881261447,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,1.17254380209271,1.42826184531608,0.195133647857799,0.157635144106191,0,0.318909537314974,0.491589944147214,0.863424909329478,0.867894351489069,0,0,0,0,28.2569038378514,26.4898411698379,0,0,0.94652465824877,1.56175497718655,1.72338718186239,0.238968797952552,0.891194696329576,0.283076530788832,1.61924280669958,1.46127928955656,0,16.0660658210904,0.141940085208269,0,0,0,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,48.6828636227917,0.900305470156551,1.29358683782755,5.78709994585299,14.5418991586664,8.91844088010353,8.72109809191241,4.56697423671899,0.23467170806371,0,0.441056796109924,0,0,0.180938774784468,0,0,0,24.1052892613663,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,0.539457385539283,0.495920734352016,0.26175594198403,0.777689839750757,0,0,0,0,0.388902376688095,0,0.675824501963113,0.352071715937262,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0.772758376128762,0,0,0,0,25.413832917768,25.3178880078947,33.8008352929244,28.3557750867085,28.773465830367,26.4387864086395,28.3509450097358,22.9663813644352,32.6262534468627,17.0860902878101,0.103787347584177,1.59609949360412,2.73173769206615,3.16038732188782,1.88651846365184,3.12533964365024,4.22268782823069,2.88449080134452,5.13470735346904,2.52697211763797,3.8021894983536,3.39527414494937,3.37109426891577,3.00918216302886,3.84817642002609,2.38146845641537,4.05595140806994,2.70072908649187,3.29668720642645,4.41596760403192,4.80016953339582,4.43689515398344,2.62279808942053,4.0696996657052,2.1645157495526,3.63842813934209,3.10977553883713,2.63069711437843,3.66671107383827,1.68342681497322,3.6776855618494,3.34915240076916,2.86461730218783,2.94379998253335,1.92906610981141,1.99848462350357,2.8071793013449,3.00819475667618,1.91288332068843,1.98532277207564,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,1.31811709640683,1.36100929351998,0.55994568650145,0,0,0,0,0,0,0,11.7343547298567,12.6957835025288,22.8179305262225,0,0,0,0,0,1.49800055259202,1.53687322128622,1.76272340924412,3.10513658162888,1.47227472945967,20.5668708770739,19.6573001446936,2.69479758272899,2.01275489138296,2.75765635983006,17.6185409599022,36.3908913542785,32.1037654505549,10.9465618816061,12.9912453915422,14.5855743755893,24.0097379141188,27.0126052815206,22.1557459276375,27.4004584490511,35.0234334765793,12.1159639786445,0.227178579999552,0.906858721281426,0,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.68510327831436,1.03575153458869,6.38301197978747,1.38788261412909,2.13125834818499,0.922461989024234,2.26083960828934,4.58595957829249,1.0053327306374,0,0,0,0,0,0,0,83.1497463512794,66.6040527666787,0,0,0,0,34.1522657842996,28.3650373747548,7.03664371832041,31.8098505951866,17.6443665557928,36.5706958424826,26.2830846169767,0,0,0,1.89397670297827,0.650602214813519,0.459804208866946,4.32149111532838,2.10986744970001,1.83698547708585,1.92170580427275,2.06143794031403,5.69147415625834,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.268412837520744,24.6039239820029,8.02655976558419,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,1.11189021922435,0.190225626112559,0,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0.889357881261447,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,1.17254380209271,1.42826184531608,0.195133647857799,0.157635144106191,0,0.318909537314974,0.491589944147214,0.863424909329478,0.867894351489069,0,0,0,0,28.2569038378514,26.4898411698379,0,0,0.94652465824877,1.56175497718655,1.72338718186239,0.238968797952552,0.891194696329576,0.283076530788832,1.61924280669958,1.46127928955656,0,16.0660658210904,0.141940085208269,0,0,0,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,48.6828636227917,0.900305470156551,1.29358683782755,5.78709994585299,14.5418991586664,8.91844088010353,8.72109809191241,4.56697423671899,0.23467170806371,0,0.441056796109924,0,0,0.180938774784468,0,0,0,24.1052892613663,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,0.539457385539283,0.495920734352016,0.26175594198403,0.777689839750757,0,0,0,0,0.388902376688095,0,0.675824501963113,0.352071715937262,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0.772758376128762,0,0,0,0,25.413832917768,25.3178880078947,33.8008352929244,28.3557750867085,28.773465830367,26.4387864086395,28.3509450097358,22.9663813644352,32.6262534468627,17.0860902878101,0.103787347584177,1.59609949360412,2.73173769206615,3.16038732188782,1.88651846365184,3.12533964365024,4.22268782823069,2.88449080134452,5.13470735346904,2.52697211763797,3.8021894983536,3.39527414494937,3.37109426891577,3.00918216302886,3.84817642002609,2.38146845641537,4.05595140806994,2.70072908649187,3.29668720642645,4.41596760403192,4.80016953339582,4.43689515398344,2.62279808942053,4.0696996657052,2.1645157495526,3.63842813934209,3.10977553883713,2.63069711437843,3.66671107383827,1.68342681497322,3.6776855618494,3.34915240076916,2.86461730218783,2.94379998253335,1.92906610981141,1.99848462350357,2.8071793013449,3.00819475667618,1.91288332068843,1.98532277207564,0.695603506861264
|short_description=p3@Nrxn1
}}
}}

Latest revision as of 00:59, 27 September 2015

Short description:p3@Nrxn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nrxn1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -20bp_to_ENSMUST00000159778, ENSMUST00000161102_5end
EntrezGene:Nrxn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nrxn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.99
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.40
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B283.15
cerebellum, neonate N30.CNhs11135.1395-42I266.60
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.15
corpus striatum, adult.CNhs10487.19-21D828.37
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D531.81
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F236.57
diencephalon, neonate N30.CNhs11201.1388-42B226.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E824.60
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C228.26
medulla oblongata, neonate N30.CNhs11200.1396-42A326.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G848.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F68.92
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C924.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.63e-1623
neuroblast (sensu Vertebrata)3.63e-1623
neuron5.44e-1233
neuronal stem cell5.44e-1233
neuroblast5.44e-1233
electrically signaling cell5.44e-1233
neural cell1.93e-1043
ectodermal cell5.59e-1044
neurectodermal cell5.59e-1044
electrically responsive cell8.74e-0939
electrically active cell8.74e-0939

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.33e-3754
neurectoderm3.91e-3664
neural plate3.91e-3664
presumptive neural plate3.91e-3664
central nervous system4.99e-3673
neural tube1.77e-3552
neural rod1.77e-3552
future spinal cord1.77e-3552
neural keel1.77e-3552
nervous system2.01e-3475
brain8.96e-3147
future brain8.96e-3147
regional part of brain5.92e-3046
ectoderm-derived structure3.23e-2995
ectoderm3.23e-2995
presumptive ectoderm3.23e-2995
ecto-epithelium6.61e-2973
pre-chordal neural plate2.08e-2749
anterior neural tube1.45e-2640
regional part of forebrain1.54e-2539
forebrain1.54e-2539
future forebrain1.54e-2539
gray matter2.18e-2434
structure with developmental contribution from neural crest6.53e-2492
brain grey matter4.16e-2029
regional part of telencephalon4.16e-2029
telencephalon4.16e-2029
cerebral cortex6.58e-1421
cerebral hemisphere6.58e-1421
pallium6.58e-1421
regional part of cerebral cortex2.68e-1217
occipital lobe4.82e-1010
visual cortex4.82e-1010
neocortex4.82e-1010
posterior neural tube5.01e-0912
chordal neural plate5.01e-0912
basal ganglion2.03e-078
nuclear complex of neuraxis2.03e-078
aggregate regional part of brain2.03e-078
collection of basal ganglia2.03e-078
cerebral subcortex2.03e-078
tube2.41e-07114
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